RNA–Protein interactions for RNA: ENST00000430190.5

HIGD1A-203, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-203ENST00000430190 NISCHQ9Y2I1 1504 aa33.74■■■□□ 2.99
HIGD1A-203ENST00000430190 ABCC9O60706 1549 aa30.78■■■□□ 2.52
HIGD1A-203ENST00000430190 CCDC180Q9P1Z9 1646 aa30.3■■■□□ 2.44
HIGD1A-203ENST00000430190 DNAJC5BQ9UF47 199 aa29.2■■■□□ 2.26
HIGD1A-203ENST00000430190 RB1CC1Q8TDY2 1594 aa29.09■■■□□ 2.25
HIGD1A-203ENST00000430190 NACADO15069 1562 aa28.8■■■□□ 2.2
HIGD1A-203ENST00000430190 DCAF8L2P0C7V8 631 aa28.8■■■□□ 2.2
HIGD1A-203ENST00000430190 PABPN1Q86U42 306 aaKnown RBP eCLIP28.69■■■□□ 2.18
HIGD1A-203ENST00000430190 UNC13AQ9UPW8 1703 aa28.29■■■□□ 2.12
HIGD1A-203ENST00000430190 MYO15BQ96JP2 1530 aa28.28■■■□□ 2.12
HIGD1A-203ENST00000430190 BICRAQ9NZM4 1560 aa28.23■■■□□ 2.11
HIGD1A-203ENST00000430190 ZCCHC6Q5VYS8 1495 aaKnown RBP27.87■■■□□ 2.05
HIGD1A-203ENST00000430190 SHROOM4Q9ULL8 1493 aa27.81■■■□□ 2.04
HIGD1A-203ENST00000430190 DCAF1Q9Y4B6 1507 aa27.8■■■□□ 2.04
HIGD1A-203ENST00000430190 CECR2Q9BXF3 1484 aa27.76■■■□□ 2.03
HIGD1A-203ENST00000430190 CC2D2AQ9P2K1 1620 aa27.71■■■□□ 2.03
HIGD1A-203ENST00000430190 SCRIBQ14160 1630 aa27.69■■■□□ 2.02
HIGD1A-203ENST00000430190 EIF4G1Q04637 1599 aaKnown RBP27.59■■■□□ 2.01
HIGD1A-203ENST00000430190 DNAJC5Q9H3Z4 198 aa27.05■■□□□ 1.92
HIGD1A-203ENST00000430190 NCAPD3P42695 1498 aa26.64■■□□□ 1.86
HIGD1A-203ENST00000430190 CUX2O14529 1486 aa26.62■■□□□ 1.85
HIGD1A-203ENST00000430190 ERCC6Q03468 1493 aa26.62■■□□□ 1.85
HIGD1A-203ENST00000430190 ATAD2BQ9ULI0 1458 aa26.51■■□□□ 1.83
HIGD1A-203ENST00000430190 SMARCA2P51531 1590 aa26.39■■□□□ 1.82
HIGD1A-203ENST00000430190 HMGXB3Q12766 1538 aa26.35■■□□□ 1.81
HIGD1A-203ENST00000430190 SMARCA4P51532 1647 aa26.35■■□□□ 1.81
HIGD1A-203ENST00000430190 NESP48681 1621 aa26.34■■□□□ 1.81
HIGD1A-203ENST00000430190 BAZ1BQ9UIG0 1483 aaKnown RBP26.24■■□□□ 1.79
HIGD1A-203ENST00000430190 BAZ1AQ9NRL2 1556 aaPredicted RBP26.2■■□□□ 1.78
HIGD1A-203ENST00000430190 PEG3Q9GZU2 1588 aa26.07■■□□□ 1.76
HIGD1A-203ENST00000430190 THOC2Q8NI27 1593 aaKnown RBP26.04■■□□□ 1.76
HIGD1A-203ENST00000430190 LAMC3Q9Y6N6 1575 aa26.03■■□□□ 1.76
HIGD1A-203ENST00000430190 MROH2BQ7Z745 1585 aa26.01■■□□□ 1.75
HIGD1A-203ENST00000430190 PDS5BQ9NTI5 1447 aa25.97■■□□□ 1.75
HIGD1A-203ENST00000430190 KIF21AQ7Z4S6 1674 aa25.87■■□□□ 1.73
HIGD1A-203ENST00000430190 CADPSQ9ULU8 1353 aa25.84■■□□□ 1.73
HIGD1A-203ENST00000430190 TRIM41Q8WV44 630 aa25.79■■□□□ 1.72
HIGD1A-203ENST00000430190 MRC2Q9UBG0 1479 aa25.75■■□□□ 1.71
HIGD1A-203ENST00000430190 WDR62O43379 1518 aa25.65■■□□□ 1.7
HIGD1A-203ENST00000430190 WIZO95785 1651 aa25.64■■□□□ 1.69
HIGD1A-203ENST00000430190 CEP164Q9UPV0 1460 aa25.59■■□□□ 1.69
HIGD1A-203ENST00000430190 FANCD2Q9BXW9 1451 aa25.53■■□□□ 1.68
HIGD1A-203ENST00000430190 OSCARQ8IYS5 282 aa25.45■■□□□ 1.66
HIGD1A-203ENST00000430190 CFTRP13569 1480 aa25.45■■□□□ 1.66
HIGD1A-203ENST00000430190 RSF1Q96T23 1441 aaPredicted RBP25.38■■□□□ 1.65
HIGD1A-203ENST00000430190 URB2Q14146 1524 aaKnown RBP25.32■■□□□ 1.64
HIGD1A-203ENST00000430190 TOP2AP11388 1531 aaKnown RBP25.3■■□□□ 1.64
HIGD1A-203ENST00000430190 ZNF608Q9ULD9 1512 aaPredicted RBP25.09■■□□□ 1.61
HIGD1A-203ENST00000430190 IFT140Q96RY7 1462 aa25.09■■□□□ 1.61
HIGD1A-203ENST00000430190 CCDC88BA6NC98 1476 aa25.07■■□□□ 1.6
HIGD1A-203ENST00000430190 RIMBP3CA6NJZ7 1639 aa25.02■■□□□ 1.6
HIGD1A-203ENST00000430190 RIMBP3BA6NNM3 1639 aa25.02■■□□□ 1.6
HIGD1A-203ENST00000430190 RIMBP3Q9UFD9 1639 aa25.02■■□□□ 1.6
HIGD1A-203ENST00000430190 TOPBP1Q92547 1522 aa24.99■■□□□ 1.59
HIGD1A-203ENST00000430190 PRDM2Q13029 1718 aa24.98■■□□□ 1.59
HIGD1A-203ENST00000430190 ARHGEF11O15085 1522 aa24.95■■□□□ 1.58
HIGD1A-203ENST00000430190 ABCC8Q09428 1581 aa24.92■■□□□ 1.58
HIGD1A-203ENST00000430190 CYB5RLQ6IPT4 315 aa24.9■■□□□ 1.58
HIGD1A-203ENST00000430190 EIF4G3O43432 1585 aaKnown RBP24.86■■□□□ 1.57
HIGD1A-203ENST00000430190 AQRO60306 1485 aaKnown RBP eCLIP24.85■■□□□ 1.573e-7■■■□□ 16.1
HIGD1A-203ENST00000430190 DNMBPQ6XZF7 1577 aa24.84■■□□□ 1.57
HIGD1A-203ENST00000430190 FBLN2P98095 1184 aa24.83■■□□□ 1.57
HIGD1A-203ENST00000430190 TRHP20396 242 aaPredicted RBP24.75■■□□□ 1.55
HIGD1A-203ENST00000430190 TARBP1Q13395 1621 aaKnown RBP24.75■■□□□ 1.55
HIGD1A-203ENST00000430190 POLA1P09884 1462 aaPredicted RBP24.72■■□□□ 1.55
HIGD1A-203ENST00000430190 CHD1O14646 1710 aa24.69■■□□□ 1.54
HIGD1A-203ENST00000430190 ARAP1Q96P48 1450 aa24.69■■□□□ 1.54
HIGD1A-203ENST00000430190 TDRD9Q8NDG6 1382 aaKnown RBP24.67■■□□□ 1.54
HIGD1A-203ENST00000430190 RAD54L2Q9Y4B4 1467 aa24.67■■□□□ 1.54
HIGD1A-203ENST00000430190 SOGA1O94964 1423 aa24.66■■□□□ 1.54
HIGD1A-203ENST00000430190 AEBP2Q6ZN18 517 aaPredicted RBP24.61■■□□□ 1.53
HIGD1A-203ENST00000430190 CHMP7Q8WUX9 453 aaPredicted RBP24.57■■□□□ 1.52
HIGD1A-203ENST00000430190 SNAPC4Q5SXM2 1469 aa24.56■■□□□ 1.52
HIGD1A-203ENST00000430190 FGD5Q6ZNL6 1462 aa24.53■■□□□ 1.52
HIGD1A-203ENST00000430190 CLASP1Q7Z460 1538 aa24.45■■□□□ 1.51
HIGD1A-203ENST00000430190 GRIN2BQ13224 1484 aa24.45■■□□□ 1.51
HIGD1A-203ENST00000430190 MAGI1Q96QZ7 1491 aaPredicted RBP24.45■■□□□ 1.51
HIGD1A-203ENST00000430190 WDR97A6NE52 1622 aa24.44■■□□□ 1.5
HIGD1A-203ENST00000430190 CUX1P39880 1505 aa24.44■■□□□ 1.5
HIGD1A-203ENST00000430190 SYNJ1O43426 1573 aa24.43■■□□□ 1.5
HIGD1A-203ENST00000430190 SYNJ2O15056 1496 aa24.39■■□□□ 1.5
HIGD1A-203ENST00000430190 GAPVD1Q14C86 1478 aa24.32■■□□□ 1.48
HIGD1A-203ENST00000430190 ABCA10Q8WWZ4 1543 aa24.21■■□□□ 1.47
HIGD1A-203ENST00000430190 PBRM1Q86U86 1689 aa24.21■■□□□ 1.47
HIGD1A-203ENST00000430190 ABCA5Q8WWZ7 1642 aa24.15■■□□□ 1.46
HIGD1A-203ENST00000430190 SUPT5HO00267 1087 aaKnown RBP24.13■■□□□ 1.45
HIGD1A-203ENST00000430190 GRIN2AQ12879 1464 aa24.12■■□□□ 1.45
HIGD1A-203ENST00000430190 WRNQ14191 1432 aaPredicted RBP eCLIP24.11■■□□□ 1.45
HIGD1A-203ENST00000430190 ERCC6L2Q5T890 1561 aa24.08■■□□□ 1.45
HIGD1A-203ENST00000430190 NUP160Q12769 1436 aa24.04■■□□□ 1.44
HIGD1A-203ENST00000430190 CEP170Q5SW79 1584 aa24.02■■□□□ 1.44
HIGD1A-203ENST00000430190 ADAMTS12P58397 1594 aa24.01■■□□□ 1.43
HIGD1A-203ENST00000430190 FHAD1B1AJZ9 1412 aa24.01■■□□□ 1.43
HIGD1A-203ENST00000430190 TOP2BQ02880 1626 aa23.93■■□□□ 1.42
HIGD1A-203ENST00000430190 SHROOM2Q13796 1616 aa23.9■■□□□ 1.42
HIGD1A-203ENST00000430190 PRG4Q92954 1404 aaPredicted RBP23.9■■□□□ 1.42
HIGD1A-203ENST00000430190 BIVM-ERCC5R4GMW8 1640 aa23.89■■□□□ 1.42
HIGD1A-203ENST00000430190 ERICH3Q5RHP9 1530 aa23.89■■□□□ 1.41
HIGD1A-203ENST00000430190 JPH4Q96JJ6 628 aa23.88■■□□□ 1.41
HIGD1A-203ENST00000430190 NPM1P06748 294 aaKnown RBP eCLIP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms