RNA–Protein interactions for RNA: ENST00000480112.5

CDK5RAP2-212, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 5,826 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-212ENST00000480112 DCAF8L2P0C7V8 631 aa21.06■□□□□ 0.96
CDK5RAP2-212ENST00000480112 PELP1Q8IZL8 1130 aaKnown RBP20.75■□□□□ 0.91
CDK5RAP2-212ENST00000480112 SUPT5HO00267 1087 aaKnown RBP20.45■□□□□ 0.87
CDK5RAP2-212ENST00000480112 NISCHQ9Y2I1 1504 aa20.45■□□□□ 0.86
CDK5RAP2-212ENST00000480112 MYT1Q01538 1121 aa19.99■□□□□ 0.79
CDK5RAP2-212ENST00000480112 ZEB1P37275 1124 aaPredicted RBP19.88■□□□□ 0.77
CDK5RAP2-212ENST00000480112 APLP2Q06481 763 aa19.88■□□□□ 0.77
CDK5RAP2-212ENST00000480112 SHROOM4Q9ULL8 1493 aa19.87■□□□□ 0.77
CDK5RAP2-212ENST00000480112 CENPBP07199 599 aaPredicted RBP19.84■□□□□ 0.77
CDK5RAP2-212ENST00000480112 CCER1Q8TC90 406 aaPredicted RBP19.76■□□□□ 0.75
CDK5RAP2-212ENST00000480112 ERICH6Q7L0X2 663 aa19.66■□□□□ 0.74
CDK5RAP2-212ENST00000480112 PCGF6Q9BYE7 350 aa19.56■□□□□ 0.72
CDK5RAP2-212ENST00000480112 EHMT2Q96KQ7 1210 aa19.51■□□□□ 0.71
CDK5RAP2-212ENST00000480112 FAM9AQ8IZU1 332 aaPredicted RBP19.46■□□□□ 0.71
CDK5RAP2-212ENST00000480112 NEFLP07196 543 aa19.28■□□□□ 0.68
CDK5RAP2-212ENST00000480112 TRIM41Q8WV44 630 aa19.13■□□□□ 0.65
CDK5RAP2-212ENST00000480112 TTBK1Q5TCY1 1321 aaPredicted RBP19.02■□□□□ 0.64
CDK5RAP2-212ENST00000480112 TRIM26Q12899 539 aaPredicted RBP18.96■□□□□ 0.63
CDK5RAP2-212ENST00000480112 HRCP23327 699 aa18.92■□□□□ 0.62
CDK5RAP2-212ENST00000480112 UBTFP17480 764 aaKnown RBP18.85■□□□□ 0.61
CDK5RAP2-212ENST00000480112 YTHDC1Q96MU7 727 aaKnown RBP18.85■□□□□ 0.61
CDK5RAP2-212ENST00000480112 DAXXQ9UER7 740 aaPredicted RBP18.72■□□□□ 0.59
CDK5RAP2-212ENST00000480112 RANGAP1P46060 587 aaPredicted RBP18.68■□□□□ 0.58
CDK5RAP2-212ENST00000480112 ATP1B4Q9UN42 357 aaPredicted RBP18.68■□□□□ 0.58
CDK5RAP2-212ENST00000480112 RTL5Q5HYW3 569 aaPredicted RBP18.44■□□□□ 0.54
CDK5RAP2-212ENST00000480112 CHIC1Q5VXU3 224 aa18.34■□□□□ 0.53
CDK5RAP2-212ENST00000480112 DIEXFQ68CQ4 756 aaKnown RBP18.33■□□□□ 0.52
CDK5RAP2-212ENST00000480112 PPARGC1BQ86YN6 1023 aaKnown RBP18.31■□□□□ 0.52
CDK5RAP2-212ENST00000480112 ZNF316A6NFI3 1004 aaPredicted RBP18.27■□□□□ 0.52
CDK5RAP2-212ENST00000480112 HNRNPUL2Q1KMD3 747 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP2-212ENST00000480112 LOC105371045A0A1W2PR82 267 aa18.14■□□□□ 0.49
CDK5RAP2-212ENST00000480112 ITGAEP38570 1179 aa18.14■□□□□ 0.49
CDK5RAP2-212ENST00000480112 POLR3GLQ9BT43 218 aa18.13■□□□□ 0.49
CDK5RAP2-212ENST00000480112 CLSPNQ9HAW4 1339 aa18.08■□□□□ 0.48
CDK5RAP2-212ENST00000480112 CDK11AQ9UQ88 783 aaPredicted RBP18.06■□□□□ 0.48
CDK5RAP2-212ENST00000480112 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.04■□□□□ 0.48
CDK5RAP2-212ENST00000480112 GTF3C3Q9Y5Q9 886 aa18.03■□□□□ 0.48
CDK5RAP2-212ENST00000480112 ANP32CO43423 234 aa17.96■□□□□ 0.47
CDK5RAP2-212ENST00000480112 MYT1LQ9UL68 1186 aa17.91■□□□□ 0.46
CDK5RAP2-212ENST00000480112 ACIN1Q9UKV3 1341 aaKnown RBP17.9■□□□□ 0.46
CDK5RAP2-212ENST00000480112 FAM50AQ14320 339 aaKnown RBP17.81■□□□□ 0.44
CDK5RAP2-212ENST00000480112 ANP32AP39687 249 aaKnown RBP17.79■□□□□ 0.44
CDK5RAP2-212ENST00000480112 BCANQ96GW7 911 aa17.76■□□□□ 0.43
CDK5RAP2-212ENST00000480112 ZBTB47Q9UFB7 747 aaPredicted RBP17.76■□□□□ 0.43
CDK5RAP2-212ENST00000480112 CNGB1Q14028 1251 aaPredicted RBP17.75■□□□□ 0.43
CDK5RAP2-212ENST00000480112 TRIM52Q96A61 297 aa17.75■□□□□ 0.43
CDK5RAP2-212ENST00000480112 SLC4A1APQ9BWU0 796 aaKnown RBP17.73■□□□□ 0.43
CDK5RAP2-212ENST00000480112 NEUROD1Q13562 356 aa17.69■□□□□ 0.42
CDK5RAP2-212ENST00000480112 DCAF1Q9Y4B6 1507 aa17.62■□□□□ 0.41
CDK5RAP2-212ENST00000480112 GLIPR1L2Q4G1C9 344 aa17.6■□□□□ 0.41
CDK5RAP2-212ENST00000480112 CANXP27824 592 aaKnown RBP17.59■□□□□ 0.41
CDK5RAP2-212ENST00000480112 ANP32BQ92688 251 aaKnown RBP17.57■□□□□ 0.4
CDK5RAP2-212ENST00000480112 NEFMP07197 916 aa17.51■□□□□ 0.39
CDK5RAP2-212ENST00000480112 UPF2Q9HAU5 1272 aaKnown RBP17.43■□□□□ 0.38
CDK5RAP2-212ENST00000480112 ZNF326Q5BKZ1 582 aaKnown RBP17.43■□□□□ 0.38
CDK5RAP2-212ENST00000480112 FKBP8Q14318 412 aa17.42■□□□□ 0.38
CDK5RAP2-212ENST00000480112 CSRNP3Q8WYN3 585 aa17.42■□□□□ 0.38
CDK5RAP2-212ENST00000480112 TONSLQ96HA7 1378 aa17.36■□□□□ 0.37
CDK5RAP2-212ENST00000480112 EIF5BO60841 1220 aaKnown RBP17.36■□□□□ 0.37
CDK5RAP2-212ENST00000480112 NPM2Q86SE8 214 aaKnown RBP17.36■□□□□ 0.37
CDK5RAP2-212ENST00000480112 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.31■□□□□ 0.36
CDK5RAP2-212ENST00000480112 HSP90AA1P07900 732 aaKnown RBP17.29■□□□□ 0.36
CDK5RAP2-212ENST00000480112 HNRNPUQ00839 825 aaKnown RBP eCLIP17.28■□□□□ 0.36
CDK5RAP2-212ENST00000480112 CCDC136Q96JN2 1154 aa17.23■□□□□ 0.35
CDK5RAP2-212ENST00000480112 ANP32EQ9BTT0 268 aa17.22■□□□□ 0.35
CDK5RAP2-212ENST00000480112 DDRGK1Q96HY6 314 aa17.2■□□□□ 0.34
CDK5RAP2-212ENST00000480112 SCAF1Q9H7N4 1312 aaKnown RBP17.16■□□□□ 0.34
CDK5RAP2-212ENST00000480112 DDX10Q13206 875 aaKnown RBP17.14■□□□□ 0.33
CDK5RAP2-212ENST00000480112 FAM9BQ8IZU0 186 aa17.11■□□□□ 0.33
CDK5RAP2-212ENST00000480112 TMC1Q8TDI8 760 aa17.1■□□□□ 0.33
CDK5RAP2-212ENST00000480112 BECN1Q14457 450 aa17.09■□□□□ 0.33
CDK5RAP2-212ENST00000480112 NBR1Q14596 966 aa17.08■□□□□ 0.33
CDK5RAP2-212ENST00000480112 SLC24A1O60721 1099 aa17.08■□□□□ 0.32
CDK5RAP2-212ENST00000480112 ABCC9O60706 1549 aa17.07■□□□□ 0.32
CDK5RAP2-212ENST00000480112 WDR43Q15061 677 aaKnown RBP eCLIP17.04■□□□□ 0.32
CDK5RAP2-212ENST00000480112 PABPN1Q86U42 306 aaKnown RBP eCLIP17.04■□□□□ 0.322e-6■□□□□ 9.6
CDK5RAP2-212ENST00000480112 MRS2Q9HD23 443 aa17.04■□□□□ 0.32
CDK5RAP2-212ENST00000480112 CCDC180Q9P1Z9 1646 aa17.03■□□□□ 0.32
CDK5RAP2-212ENST00000480112 BCL11AQ9H165 835 aa17.01■□□□□ 0.31
CDK5RAP2-212ENST00000480112 P3H3Q8IVL6 736 aa17.01■□□□□ 0.31
CDK5RAP2-212ENST00000480112 PPM1GO15355 546 aaPredicted RBP17.01■□□□□ 0.31
CDK5RAP2-212ENST00000480112 EEA1Q15075 1411 aa17■□□□□ 0.31
CDK5RAP2-212ENST00000480112 MIER1Q8N108 512 aa17■□□□□ 0.31
CDK5RAP2-212ENST00000480112 ZCCHC6Q5VYS8 1495 aaKnown RBP17■□□□□ 0.31
CDK5RAP2-212ENST00000480112 ZNF777Q9ULD5 760 aaPredicted RBP16.99■□□□□ 0.31
CDK5RAP2-212ENST00000480112 TRIM44Q96DX7 344 aaPredicted RBP16.97■□□□□ 0.31
CDK5RAP2-212ENST00000480112 GOLGA6L22H0YM25 854 aa16.97■□□□□ 0.31
CDK5RAP2-212ENST00000480112 MYH16Q9H6N6 1097 aa16.96■□□□□ 0.31
CDK5RAP2-212ENST00000480112 TNNT2P45379 298 aaPredicted RBP16.96■□□□□ 0.31
CDK5RAP2-212ENST00000480112 ERICH6BQ5W0A0 696 aa16.94■□□□□ 0.3
CDK5RAP2-212ENST00000480112 EIF4G2P78344 907 aaKnown RBP eCLIP16.94■□□□□ 0.38e-7■■■■■ 28.7
CDK5RAP2-212ENST00000480112 FBLN2P98095 1184 aa16.94■□□□□ 0.3
CDK5RAP2-212ENST00000480112 NCLP19338 710 aaKnown RBP16.93■□□□□ 0.3
CDK5RAP2-212ENST00000480112 CLIP1P30622 1438 aa16.89■□□□□ 0.29
CDK5RAP2-212ENST00000480112 GOLGA3Q08378 1498 aa16.85■□□□□ 0.29
CDK5RAP2-212ENST00000480112 MTUS2Q5JR59 1369 aa16.84■□□□□ 0.29
CDK5RAP2-212ENST00000480112 RSF1Q96T23 1441 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP2-212ENST00000480112 PPP4R2Q9NY27 417 aa16.83■□□□□ 0.29
CDK5RAP2-212ENST00000480112 SCRIBQ14160 1630 aa16.82■□□□□ 0.28
CDK5RAP2-212ENST00000480112 SALL2Q9Y467 1007 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms