RNA–Protein interactions for RNA: ENST00000473282.6

CDK5RAP2-209, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 5,956 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-209ENST00000473282 MYT1Q01538 1121 aa14.6□□□□□ -0.07
CDK5RAP2-209ENST00000473282 PELP1Q8IZL8 1130 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP2-209ENST00000473282 TTBK1Q5TCY1 1321 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP2-209ENST00000473282 ERICH6Q7L0X2 663 aa13.62□□□□□ -0.23
CDK5RAP2-209ENST00000473282 DCAF8L2P0C7V8 631 aa13.42□□□□□ -0.26
CDK5RAP2-209ENST00000473282 RANGAP1P46060 587 aaPredicted RBP13.32□□□□□ -0.28
CDK5RAP2-209ENST00000473282 CCER1Q8TC90 406 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP2-209ENST00000473282 NISCHQ9Y2I1 1504 aa13.05□□□□□ -0.32
CDK5RAP2-209ENST00000473282 YTHDC1Q96MU7 727 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP2-209ENST00000473282 SLC24A1O60721 1099 aa13.04□□□□□ -0.32
CDK5RAP2-209ENST00000473282 EHMT2Q96KQ7 1210 aa12.74□□□□□ -0.37
CDK5RAP2-209ENST00000473282 SUPT5HO00267 1087 aaKnown RBP12.71□□□□□ -0.38
CDK5RAP2-209ENST00000473282 CENPBP07199 599 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP2-209ENST00000473282 SHROOM4Q9ULL8 1493 aa12.65□□□□□ -0.38
CDK5RAP2-209ENST00000473282 GLIPR1L2Q4G1C9 344 aa12.65□□□□□ -0.39
CDK5RAP2-209ENST00000473282 POLR3GLQ9BT43 218 aa12.44□□□□□ -0.42
CDK5RAP2-209ENST00000473282 EIF5BO60841 1220 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP2-209ENST00000473282 RTL5Q5HYW3 569 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP2-209ENST00000473282 MYT1LQ9UL68 1186 aa12.25□□□□□ -0.45
CDK5RAP2-209ENST00000473282 NEFLP07196 543 aa12.17□□□□□ -0.46
CDK5RAP2-209ENST00000473282 DAXXQ9UER7 740 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP2-209ENST00000473282 FAM9AQ8IZU1 332 aaPredicted RBP12.03□□□□□ -0.48
CDK5RAP2-209ENST00000473282 APLP2Q06481 763 aa11.98□□□□□ -0.49
CDK5RAP2-209ENST00000473282 CLSPNQ9HAW4 1339 aa11.96□□□□□ -0.49
CDK5RAP2-209ENST00000473282 PCGF6Q9BYE7 350 aa11.92□□□□□ -0.5
CDK5RAP2-209ENST00000473282 ZEB1P37275 1124 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP2-209ENST00000473282 ZNF326Q5BKZ1 582 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP2-209ENST00000473282 HRCP23327 699 aa11.86□□□□□ -0.51
CDK5RAP2-209ENST00000473282 CDK11BP21127 795 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP2-209ENST00000473282 ZNF316A6NFI3 1004 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP2-209ENST00000473282 TNNT2P45379 298 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP2-209ENST00000473282 BCL11AQ9H165 835 aa11.8□□□□□ -0.52
CDK5RAP2-209ENST00000473282 PODXL2Q9NZ53 605 aa11.76□□□□□ -0.53
CDK5RAP2-209ENST00000473282 TRIM41Q8WV44 630 aa11.74□□□□□ -0.53
CDK5RAP2-209ENST00000473282 NCLP19338 710 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP2-209ENST00000473282 ATP1B4Q9UN42 357 aaPredicted RBP11.7□□□□□ -0.54
CDK5RAP2-209ENST00000473282 CDK11AQ9UQ88 783 aaPredicted RBP11.7□□□□□ -0.54
CDK5RAP2-209ENST00000473282 PRKCSHP14314 528 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP2-209ENST00000473282 C14orf37Q86TY3 774 aa11.62□□□□□ -0.55
CDK5RAP2-209ENST00000473282 HAP1P54257 671 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP2-209ENST00000473282 UBTFP17480 764 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP2-209ENST00000473282 HOMEZQ8IX15 550 aa11.6□□□□□ -0.55
CDK5RAP2-209ENST00000473282 PTMSP20962 102 aa11.59□□□□□ -0.55
CDK5RAP2-209ENST00000473282 CALRP27797 417 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP2-209ENST00000473282 TRIM44Q96DX7 344 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP2-209ENST00000473282 A0A0U1RQG5 324 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP2-209ENST00000473282 PPARGC1BQ86YN6 1023 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP2-209ENST00000473282 AMER1Q5JTC6 1135 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP2-209ENST00000473282 TULP1O00294 542 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP2-209ENST00000473282 ANP32BQ92688 251 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP2-209ENST00000473282 GTF3C3Q9Y5Q9 886 aa11.42□□□□□ -0.58
CDK5RAP2-209ENST00000473282 HMGB1P09429 215 aaKnown RBP11.42□□□□□ -0.58
CDK5RAP2-209ENST00000473282 NPM2Q86SE8 214 aaKnown RBP11.42□□□□□ -0.58
CDK5RAP2-209ENST00000473282 ARID4BQ4LE39 1312 aaPredicted RBP11.41□□□□□ -0.58
CDK5RAP2-209ENST00000473282 SCAF1Q9H7N4 1312 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP2-209ENST00000473282 TRIM26Q12899 539 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP2-209ENST00000473282 APPP05067 770 aa11.4□□□□□ -0.59
CDK5RAP2-209ENST00000473282 PKNOX2Q96KN3 472 aa11.38□□□□□ -0.59
CDK5RAP2-209ENST00000473282 ANP32EQ9BTT0 268 aa11.36□□□□□ -0.59
CDK5RAP2-209ENST00000473282 CNGB1Q14028 1251 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP2-209ENST00000473282 LOC105371045A0A1W2PR82 267 aa11.32□□□□□ -0.6
CDK5RAP2-209ENST00000473282 NAP1L5Q96NT1 182 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP2-209ENST00000473282 ABCC9O60706 1549 aa11.32□□□□□ -0.6
CDK5RAP2-209ENST00000473282 ARID3AQ99856 593 aa11.3□□□□□ -0.6
CDK5RAP2-209ENST00000473282 TPRNQ4KMQ1 711 aa11.3□□□□□ -0.6
CDK5RAP2-209ENST00000473282 PDE4CQ08493 712 aa11.29□□□□□ -0.6
CDK5RAP2-209ENST00000473282 ANP32AP39687 249 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP2-209ENST00000473282 ACIN1Q9UKV3 1341 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP2-209ENST00000473282 CHIC1Q5VXU3 224 aa11.28□□□□□ -0.6
CDK5RAP2-209ENST00000473282 ZNF526Q8TF50 670 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP2-209ENST00000473282 ITGAEP38570 1179 aa11.28□□□□□ -0.6
CDK5RAP2-209ENST00000473282 LAS1LQ9Y4W2 734 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP2-209ENST00000473282 ERICH6BQ5W0A0 696 aa11.27□□□□□ -0.61
CDK5RAP2-209ENST00000473282 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP2-209ENST00000473282 HNRNPUL2Q1KMD3 747 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP2-209ENST00000473282 RTN4Q9NQC3 1192 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP2-209ENST00000473282 TNNT3P45378 269 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP2-209ENST00000473282 NCBP3Q53F19 620 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP2-209ENST00000473282 ARXQ96QS3 562 aa11.22□□□□□ -0.61
CDK5RAP2-209ENST00000473282 PABPN1Q86U42 306 aaKnown RBP eCLIP11.22□□□□□ -0.612e-6■□□□□ 9.6
CDK5RAP2-209ENST00000473282 VSIG10Q8N0Z9 540 aa11.2□□□□□ -0.62
CDK5RAP2-209ENST00000473282 BCANQ96GW7 911 aa11.2□□□□□ -0.62
CDK5RAP2-209ENST00000473282 NBR1Q14596 966 aa11.16□□□□□ -0.62
CDK5RAP2-209ENST00000473282 HSP90AA1P07900 732 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP2-209ENST00000473282 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP2-209ENST00000473282 PATL2C9JE40 543 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP2-209ENST00000473282 CCDC9Q9Y3X0 531 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP2-209ENST00000473282 STK11IPQ8N1F8 1099 aa11.09□□□□□ -0.63
CDK5RAP2-209ENST00000473282 PDIA4P13667 645 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP2-209ENST00000473282 CCDC136Q96JN2 1154 aa11.07□□□□□ -0.64
CDK5RAP2-209ENST00000473282 PLPPR3Q6T4P5 718 aa11.06□□□□□ -0.64
CDK5RAP2-209ENST00000473282 DEKP35659 375 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP2-209ENST00000473282 MEX3CQ5U5Q3 659 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP2-209ENST00000473282 DNTTIP2Q5QJE6 756 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP2-209ENST00000473282 CANXP27824 592 aaKnown RBP11.02□□□□□ -0.64
CDK5RAP2-209ENST00000473282 SCRIBQ14160 1630 aa11.02□□□□□ -0.65
CDK5RAP2-209ENST00000473282 NEUROD1Q13562 356 aa11.01□□□□□ -0.65
CDK5RAP2-209ENST00000473282 FAM50AQ14320 339 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP2-209ENST00000473282 DIEXFQ68CQ4 756 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP2-209ENST00000473282 NEFHP12036 1026 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms