RNA–Protein interactions for RNA: ENST00000333577.8

EP400-203, Transcript of E1A binding protein p400, humanhuman

TSL 1 (best) BASIC

Gene EP400, Length 3,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EP400-203ENST00000333577 NISCHQ9Y2I1 1504 aa31.25■■■□□ 2.59
EP400-203ENST00000333577 SHROOM4Q9ULL8 1493 aa27.07■■□□□ 1.92
EP400-203ENST00000333577 SUPT5HO00267 1087 aaKnown RBP26.63■■□□□ 1.85
EP400-203ENST00000333577 ZCCHC6Q5VYS8 1495 aaKnown RBP26.41■■□□□ 1.82
EP400-203ENST00000333577 DCAF8L2P0C7V8 631 aa26.33■■□□□ 1.81
EP400-203ENST00000333577 CCDC180Q9P1Z9 1646 aa26.29■■□□□ 1.8
EP400-203ENST00000333577 CHIC1Q5VXU3 224 aa25.82■■□□□ 1.72
EP400-203ENST00000333577 MYO15BQ96JP2 1530 aa25.68■■□□□ 1.7
EP400-203ENST00000333577 DCAF1Q9Y4B6 1507 aa25.48■■□□□ 1.67
EP400-203ENST00000333577 PCGF6Q9BYE7 350 aa25.24■■□□□ 1.63
EP400-203ENST00000333577 LOC105371045A0A1W2PR82 267 aa25.19■■□□□ 1.62
EP400-203ENST00000333577 PPARGC1BQ86YN6 1023 aaKnown RBP25.19■■□□□ 1.62
EP400-203ENST00000333577 HRCP23327 699 aa25.18■■□□□ 1.62
EP400-203ENST00000333577 SCRIBQ14160 1630 aa24.94■■□□□ 1.58
EP400-203ENST00000333577 ABCC9O60706 1549 aa24.9■■□□□ 1.58
EP400-203ENST00000333577 RSF1Q96T23 1441 aaPredicted RBP24.86■■□□□ 1.57
EP400-203ENST00000333577 TRIM41Q8WV44 630 aa24.7■■□□□ 1.55
EP400-203ENST00000333577 FAM9AQ8IZU1 332 aaPredicted RBP24.66■■□□□ 1.54
EP400-203ENST00000333577 TRIM26Q12899 539 aaPredicted RBP24.6■■□□□ 1.53
EP400-203ENST00000333577 RB1CC1Q8TDY2 1594 aa24.57■■□□□ 1.52
EP400-203ENST00000333577 EHMT2Q96KQ7 1210 aa24.56■■□□□ 1.52
EP400-203ENST00000333577 CECR2Q9BXF3 1484 aa24.51■■□□□ 1.51
EP400-203ENST00000333577 NACADO15069 1562 aa24.4■■□□□ 1.5
EP400-203ENST00000333577 MROH2BQ7Z745 1585 aa24.37■■□□□ 1.49
EP400-203ENST00000333577 PELP1Q8IZL8 1130 aaKnown RBP24.22■■□□□ 1.47
EP400-203ENST00000333577 WIZO95785 1651 aa24.21■■□□□ 1.47
EP400-203ENST00000333577 SCAF1Q9H7N4 1312 aaKnown RBP24.15■■□□□ 1.46
EP400-203ENST00000333577 ZEB1P37275 1124 aaPredicted RBP24.02■■□□□ 1.44
EP400-203ENST00000333577 BAZ1AQ9NRL2 1556 aaPredicted RBP23.95■■□□□ 1.42
EP400-203ENST00000333577 ABCC8Q09428 1581 aa23.79■■□□□ 1.4
EP400-203ENST00000333577 EIF4G1Q04637 1599 aaKnown RBP23.79■■□□□ 1.4
EP400-203ENST00000333577 CCDC88BA6NC98 1476 aa23.78■■□□□ 1.4
EP400-203ENST00000333577 TTBK1Q5TCY1 1321 aaPredicted RBP23.76■■□□□ 1.39
EP400-203ENST00000333577 TOP2AP11388 1531 aaKnown RBP23.75■■□□□ 1.39
EP400-203ENST00000333577 PABPN1Q86U42 306 aaKnown RBP eCLIP23.75■■□□□ 1.39
EP400-203ENST00000333577 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.74■■□□□ 1.39
EP400-203ENST00000333577 SMARCA4P51532 1647 aa23.73■■□□□ 1.39
EP400-203ENST00000333577 SMARCA2P51531 1590 aa23.66■■□□□ 1.38
EP400-203ENST00000333577 SOGA1O94964 1423 aa23.65■■□□□ 1.38
EP400-203ENST00000333577 CCER1Q8TC90 406 aaPredicted RBP23.63■■□□□ 1.37
EP400-203ENST00000333577 UNC13AQ9UPW8 1703 aa23.59■■□□□ 1.37
EP400-203ENST00000333577 UBTFP17480 764 aaKnown RBP23.56■■□□□ 1.36
EP400-203ENST00000333577 CSRNP3Q8WYN3 585 aa23.54■■□□□ 1.36
EP400-203ENST00000333577 CEP162Q5TB80 1403 aa23.54■■□□□ 1.36
EP400-203ENST00000333577 RUSC2Q8N2Y8 1516 aa23.53■■□□□ 1.36
EP400-203ENST00000333577 TNIKQ9UKE5 1360 aa23.45■■□□□ 1.35
EP400-203ENST00000333577 NEUROD1Q13562 356 aa23.43■■□□□ 1.34
EP400-203ENST00000333577 WRNQ14191 1432 aaPredicted RBP eCLIP23.42■■□□□ 1.34
EP400-203ENST00000333577 BICRAQ9NZM4 1560 aa23.39■■□□□ 1.33
EP400-203ENST00000333577 GTF3C3Q9Y5Q9 886 aa23.36■■□□□ 1.33
EP400-203ENST00000333577 EEA1Q15075 1411 aa23.35■■□□□ 1.33
EP400-203ENST00000333577 GOLGA3Q08378 1498 aa23.27■■□□□ 1.32
EP400-203ENST00000333577 ACIN1Q9UKV3 1341 aaKnown RBP23.26■■□□□ 1.31
EP400-203ENST00000333577 RANGAP1P46060 587 aaPredicted RBP23.22■■□□□ 1.31
EP400-203ENST00000333577 DIEXFQ68CQ4 756 aaKnown RBP23.19■■□□□ 1.3
EP400-203ENST00000333577 ATAD2BQ9ULI0 1458 aa23.18■■□□□ 1.3
EP400-203ENST00000333577 SYNJ1O43426 1573 aa23.17■■□□□ 1.3
EP400-203ENST00000333577 PEG3Q9GZU2 1588 aa23.17■■□□□ 1.3
EP400-203ENST00000333577 MYT1Q01538 1121 aa23.15■■□□□ 1.3
EP400-203ENST00000333577 HNRNPUL2Q1KMD3 747 aaKnown RBP23.15■■□□□ 1.3
EP400-203ENST00000333577 BAZ1BQ9UIG0 1483 aaKnown RBP23.13■■□□□ 1.29
EP400-203ENST00000333577 CEP164Q9UPV0 1460 aa23.12■■□□□ 1.29
EP400-203ENST00000333577 CLIP1P30622 1438 aa23.09■■□□□ 1.29
EP400-203ENST00000333577 YTHDC1Q96MU7 727 aaKnown RBP23.03■■□□□ 1.28
EP400-203ENST00000333577 RAPGEF2Q9Y4G8 1499 aa23.02■■□□□ 1.28
EP400-203ENST00000333577 APLP2Q06481 763 aa23.02■■□□□ 1.28
EP400-203ENST00000333577 KIF21BO75037 1637 aa22.98■■□□□ 1.27
EP400-203ENST00000333577 ZNF316A6NFI3 1004 aaPredicted RBP22.95■■□□□ 1.27
EP400-203ENST00000333577 VPS8Q8N3P4 1428 aa22.95■■□□□ 1.26
EP400-203ENST00000333577 CENPBP07199 599 aaPredicted RBP22.87■■□□□ 1.25
EP400-203ENST00000333577 TOP2BQ02880 1626 aa22.81■■□□□ 1.24
EP400-203ENST00000333577 KANK4Q5T7N3 995 aaPredicted RBP22.72■■□□□ 1.23
EP400-203ENST00000333577 MIER1Q8N108 512 aa22.72■■□□□ 1.23
EP400-203ENST00000333577 PRXQ9BXM0 1461 aa22.69■■□□□ 1.22
EP400-203ENST00000333577 NCAPD3P42695 1498 aa22.67■■□□□ 1.22
EP400-203ENST00000333577 BIVM-ERCC5R4GMW8 1640 aa22.66■■□□□ 1.22
EP400-203ENST00000333577 CUX1P39880 1505 aa22.65■■□□□ 1.22
EP400-203ENST00000333577 ARAP1Q96P48 1450 aa22.64■■□□□ 1.21
EP400-203ENST00000333577 KIF27Q86VH2 1401 aa22.61■■□□□ 1.21
EP400-203ENST00000333577 ERICH3Q5RHP9 1530 aa22.6■■□□□ 1.21
EP400-203ENST00000333577 HMGXB3Q12766 1538 aa22.57■■□□□ 1.2
EP400-203ENST00000333577 ITGAEP38570 1179 aa22.54■■□□□ 1.2
EP400-203ENST00000333577 CFTRP13569 1480 aa22.53■■□□□ 1.2
EP400-203ENST00000333577 DHX57Q6P158 1386 aaKnown RBP22.53■■□□□ 1.2
EP400-203ENST00000333577 ARHGAP35Q9NRY4 1499 aa22.45■■□□□ 1.18
EP400-203ENST00000333577 BCL11AQ9H165 835 aa22.42■■□□□ 1.18
EP400-203ENST00000333577 CLSPNQ9HAW4 1339 aa22.42■■□□□ 1.18
EP400-203ENST00000333577 CUX2O14529 1486 aa22.42■■□□□ 1.18
EP400-203ENST00000333577 IGF1RP08069 1367 aa22.41■■□□□ 1.18
EP400-203ENST00000333577 RRBP1Q9P2E9 1410 aaKnown RBP22.4■■□□□ 1.18
EP400-203ENST00000333577 CCNB3Q8WWL7 1395 aa22.39■■□□□ 1.17
EP400-203ENST00000333577 P3H3Q8IVL6 736 aa22.34■■□□□ 1.17
EP400-203ENST00000333577 CADPSQ9ULU8 1353 aa22.33■■□□□ 1.16
EP400-203ENST00000333577 CARMIL1Q5VZK9 1371 aa22.32■■□□□ 1.16
EP400-203ENST00000333577 ATP1B4Q9UN42 357 aaPredicted RBP22.31■■□□□ 1.16
EP400-203ENST00000333577 FGD5Q6ZNL6 1462 aa22.26■■□□□ 1.15
EP400-203ENST00000333577 RAB3GAP2Q9H2M9 1393 aa22.23■■□□□ 1.15
EP400-203ENST00000333577 FAM50AQ14320 339 aaKnown RBP22.22■■□□□ 1.15
EP400-203ENST00000333577 PHLDB1Q86UU1 1377 aa22.17■■□□□ 1.14
EP400-203ENST00000333577 TIAM1Q13009 1591 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms