Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC100797.4-201ENST00000631653 1827 ntBASIC26.09■■□□□ 1.77
MMP13P45452 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.09■■□□□ 1.77
MMP13P45452 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.09■■□□□ 1.77
MMP13P45452 ABHD17AP4-201ENST00000411545 909 ntBASIC26.09■■□□□ 1.77
MMP13P45452 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.09■■□□□ 1.77
MMP13P45452 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
MMP13P45452 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.09■■□□□ 1.77
MMP13P45452 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.09■■□□□ 1.77
MMP13P45452 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.08■■□□□ 1.77
MMP13P45452 ZNRF2P2-203ENST00000454624 420 ntBASIC26.08■■□□□ 1.77
MMP13P45452 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.08■■□□□ 1.77
MMP13P45452 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
MMP13P45452 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
MMP13P45452 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
MMP13P45452 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.07■■□□□ 1.76
MMP13P45452 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
MMP13P45452 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
MMP13P45452 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
MMP13P45452 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
MMP13P45452 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.07■■□□□ 1.76
MMP13P45452 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.06■■□□□ 1.76
MMP13P45452 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
MMP13P45452 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
MMP13P45452 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
MMP13P45452 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.05■■□□□ 1.76
MMP13P45452 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
MMP13P45452 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.04■■□□□ 1.76
MMP13P45452 LINC01971-201ENST00000617888 1048 ntBASIC26.04■■□□□ 1.76
MMP13P45452 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
MMP13P45452 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
MMP13P45452 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.03■■□□□ 1.76
MMP13P45452 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
MMP13P45452 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.02■■□□□ 1.76
MMP13P45452 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.02■■□□□ 1.76
MMP13P45452 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
MMP13P45452 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
MMP13P45452 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
MMP13P45452 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
MMP13P45452 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
MMP13P45452 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
MMP13P45452 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
MMP13P45452 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.02■■□□□ 1.76
MMP13P45452 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
MMP13P45452 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
MMP13P45452 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.01■■□□□ 1.75
MMP13P45452 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
MMP13P45452 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26■■□□□ 1.75
MMP13P45452 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26■■□□□ 1.75
MMP13P45452 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
MMP13P45452 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
MMP13P45452 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.99■■□□□ 1.75
MMP13P45452 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
MMP13P45452 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.98■■□□□ 1.75
MMP13P45452 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
MMP13P45452 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
MMP13P45452 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
MMP13P45452 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
MMP13P45452 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.97■■□□□ 1.75
MMP13P45452 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.97■■□□□ 1.75
MMP13P45452 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
MMP13P45452 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.97■■□□□ 1.75
MMP13P45452 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.97■■□□□ 1.75
MMP13P45452 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
MMP13P45452 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
MMP13P45452 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
MMP13P45452 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.96■■□□□ 1.75
MMP13P45452 AL449106.1-201ENST00000608517 1980 ntBASIC25.96■■□□□ 1.75
MMP13P45452 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.95■■□□□ 1.74
MMP13P45452 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.95■■□□□ 1.74
MMP13P45452 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.95■■□□□ 1.74
MMP13P45452 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.95■■□□□ 1.74
MMP13P45452 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
MMP13P45452 DUX4L11-201ENST00000611504 1267 ntBASIC25.94■■□□□ 1.74
MMP13P45452 DUX4L12-201ENST00000614593 1267 ntBASIC25.94■■□□□ 1.74
MMP13P45452 DUX4L14-201ENST00000621227 1267 ntBASIC25.94■■□□□ 1.74
MMP13P45452 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
MMP13P45452 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.94■■□□□ 1.74
MMP13P45452 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
MMP13P45452 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
MMP13P45452 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.93■■□□□ 1.74
MMP13P45452 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
MMP13P45452 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
MMP13P45452 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.92■■□□□ 1.74
MMP13P45452 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
MMP13P45452 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.91■■□□□ 1.74
MMP13P45452 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.91■■□□□ 1.74
MMP13P45452 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
MMP13P45452 LINC01003-201ENST00000564834 1764 ntBASIC25.9■■□□□ 1.74
MMP13P45452 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
MMP13P45452 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
MMP13P45452 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
MMP13P45452 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
MMP13P45452 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
MMP13P45452 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
MMP13P45452 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.89■■□□□ 1.74
MMP13P45452 DUX4L13-201ENST00000554103 1267 ntBASIC25.89■■□□□ 1.74
MMP13P45452 DUX4L15-201ENST00000611059 1267 ntBASIC25.89■■□□□ 1.74
MMP13P45452 DUX4L23-201ENST00000615195 1269 ntBASIC25.89■■□□□ 1.74
MMP13P45452 DUX4L24-201ENST00000617576 1269 ntBASIC25.89■■□□□ 1.74
MMP13P45452 DUX4L22-201ENST00000618238 1269 ntBASIC25.89■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms