Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 DUX4L18-201ENST00000553347 1267 ntBASIC31.66■■■□□ 2.66
PDE6BP35913 AC133552.2-201ENST00000619106 1032 ntBASIC31.66■■■□□ 2.66
PDE6BP35913 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PDE6BP35913 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PDE6BP35913 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PDE6BP35913 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC31.65■■■□□ 2.66
PDE6BP35913 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
PDE6BP35913 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PDE6BP35913 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PDE6BP35913 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
PDE6BP35913 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
PDE6BP35913 AC009831.1-201ENST00000580420 1582 ntBASIC31.64■■■□□ 2.65
PDE6BP35913 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
PDE6BP35913 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC31.63■■■□□ 2.65
PDE6BP35913 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
PDE6BP35913 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
PDE6BP35913 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
PDE6BP35913 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
PDE6BP35913 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PDE6BP35913 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PDE6BP35913 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.6■■■□□ 2.65
PDE6BP35913 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
PDE6BP35913 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.59■■■□□ 2.65
PDE6BP35913 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.59■■■□□ 2.65
PDE6BP35913 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PDE6BP35913 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
PDE6BP35913 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
PDE6BP35913 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
PDE6BP35913 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC31.57■■■□□ 2.64
PDE6BP35913 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC31.57■■■□□ 2.64
PDE6BP35913 AL035685.1-201ENST00000636663 812 ntBASIC31.57■■■□□ 2.64
PDE6BP35913 SMPD5-203ENST00000639008 1464 ntBASIC31.57■■■□□ 2.64
PDE6BP35913 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
PDE6BP35913 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
PDE6BP35913 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.55■■■□□ 2.64
PDE6BP35913 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
PDE6BP35913 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC31.54■■■□□ 2.64
PDE6BP35913 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PDE6BP35913 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
PDE6BP35913 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
PDE6BP35913 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PDE6BP35913 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
PDE6BP35913 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
PDE6BP35913 AL451085.2-201ENST00000605085 799 ntBASIC31.51■■■□□ 2.63
PDE6BP35913 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.5■■■□□ 2.63
PDE6BP35913 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
PDE6BP35913 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
PDE6BP35913 AC026202.3-201ENST00000600805 1127 ntBASIC31.5■■■□□ 2.63
PDE6BP35913 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.49■■■□□ 2.63
PDE6BP35913 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PDE6BP35913 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
PDE6BP35913 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
PDE6BP35913 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PDE6BP35913 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31.48■■■□□ 2.63
PDE6BP35913 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PDE6BP35913 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
PDE6BP35913 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
PDE6BP35913 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.47■■■□□ 2.63
PDE6BP35913 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
PDE6BP35913 TRIR-205ENST00000592273 783 ntTSL 3 BASIC31.47■■■□□ 2.63
PDE6BP35913 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC31.47■■■□□ 2.63
PDE6BP35913 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC31.47■■■□□ 2.63
PDE6BP35913 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
PDE6BP35913 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PDE6BP35913 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
PDE6BP35913 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
PDE6BP35913 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
PDE6BP35913 AL359258.2-201ENST00000564063 1566 ntBASIC31.45■■■□□ 2.63
PDE6BP35913 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC31.44■■■□□ 2.62
PDE6BP35913 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
PDE6BP35913 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.43■■■□□ 2.62
PDE6BP35913 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.42■■■□□ 2.62
PDE6BP35913 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
PDE6BP35913 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.41■■■□□ 2.62
PDE6BP35913 AC025884.2-201ENST00000553429 711 ntBASIC31.41■■■□□ 2.62
PDE6BP35913 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
PDE6BP35913 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.41■■■□□ 2.62
PDE6BP35913 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PDE6BP35913 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
PDE6BP35913 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.41■■■□□ 2.62
PDE6BP35913 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PDE6BP35913 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC31.4■■■□□ 2.62
PDE6BP35913 DUX4L9-201ENST00000449051 1259 ntBASIC31.4■■■□□ 2.62
PDE6BP35913 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC31.4■■■□□ 2.62
PDE6BP35913 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
PDE6BP35913 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.4■■■□□ 2.62
PDE6BP35913 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.4■■■□□ 2.62
PDE6BP35913 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PDE6BP35913 AP004833.2-201ENST00000532228 1454 ntBASIC31.39■■■□□ 2.62
PDE6BP35913 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.38■■■□□ 2.61
PDE6BP35913 RP9P-202ENST00000450133 1212 ntBASIC31.38■■■□□ 2.61
PDE6BP35913 BHLHE23-202ENST00000612929 1109 ntBASIC31.38■■■□□ 2.61
PDE6BP35913 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PDE6BP35913 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
PDE6BP35913 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PDE6BP35913 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC31.36■■■□□ 2.61
PDE6BP35913 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
PDE6BP35913 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PDE6BP35913 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.36■■■□□ 2.61
PDE6BP35913 AC074183.2-201ENST00000623112 922 ntBASIC31.36■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms