Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.9■■□□□ 1.9
TNFAIP3P21580 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.89■■□□□ 1.9
TNFAIP3P21580 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
TNFAIP3P21580 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.89
TNFAIP3P21580 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
TNFAIP3P21580 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
TNFAIP3P21580 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.87■■□□□ 1.89
TNFAIP3P21580 AC021231.2-201ENST00000594613 730 ntBASIC26.87■■□□□ 1.89
TNFAIP3P21580 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
TNFAIP3P21580 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.86■■□□□ 1.89
TNFAIP3P21580 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TNFAIP3P21580 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
TNFAIP3P21580 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TNFAIP3P21580 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TNFAIP3P21580 DUX4L29-201ENST00000425409 679 ntBASIC26.85■■□□□ 1.89
TNFAIP3P21580 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
TNFAIP3P21580 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TNFAIP3P21580 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
TNFAIP3P21580 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.84■■□□□ 1.89
TNFAIP3P21580 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TNFAIP3P21580 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.84■■□□□ 1.89
TNFAIP3P21580 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.83■■□□□ 1.89
TNFAIP3P21580 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.83■■□□□ 1.89
TNFAIP3P21580 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TNFAIP3P21580 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
TNFAIP3P21580 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TNFAIP3P21580 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.89
TNFAIP3P21580 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
TNFAIP3P21580 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
TNFAIP3P21580 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TNFAIP3P21580 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
TNFAIP3P21580 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
TNFAIP3P21580 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.81■■□□□ 1.88
TNFAIP3P21580 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
TNFAIP3P21580 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
TNFAIP3P21580 AC110285.7-201ENST00000624417 1536 ntBASIC26.8■■□□□ 1.88
TNFAIP3P21580 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
TNFAIP3P21580 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
TNFAIP3P21580 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TNFAIP3P21580 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TNFAIP3P21580 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.79■■□□□ 1.88
TNFAIP3P21580 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.79■■□□□ 1.88
TNFAIP3P21580 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.79■■□□□ 1.88
TNFAIP3P21580 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.79■■□□□ 1.88
TNFAIP3P21580 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TNFAIP3P21580 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TNFAIP3P21580 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
TNFAIP3P21580 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TNFAIP3P21580 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TNFAIP3P21580 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.77■■□□□ 1.88
TNFAIP3P21580 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TNFAIP3P21580 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
TNFAIP3P21580 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.77■■□□□ 1.88
TNFAIP3P21580 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.75■■□□□ 1.87
TNFAIP3P21580 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.75■■□□□ 1.87
TNFAIP3P21580 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
TNFAIP3P21580 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.75■■□□□ 1.87
TNFAIP3P21580 RPS2P35-201ENST00000443417 897 ntBASIC26.75■■□□□ 1.87
TNFAIP3P21580 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.75■■□□□ 1.87
TNFAIP3P21580 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
TNFAIP3P21580 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
TNFAIP3P21580 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.74■■□□□ 1.87
TNFAIP3P21580 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
TNFAIP3P21580 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
TNFAIP3P21580 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TNFAIP3P21580 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
TNFAIP3P21580 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TNFAIP3P21580 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.72■■□□□ 1.87
TNFAIP3P21580 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
TNFAIP3P21580 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
TNFAIP3P21580 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TNFAIP3P21580 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
TNFAIP3P21580 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
TNFAIP3P21580 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TNFAIP3P21580 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TNFAIP3P21580 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.7■■□□□ 1.86
TNFAIP3P21580 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
TNFAIP3P21580 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
TNFAIP3P21580 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TNFAIP3P21580 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.68■■□□□ 1.86
TNFAIP3P21580 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.68■■□□□ 1.86
TNFAIP3P21580 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.68■■□□□ 1.86
TNFAIP3P21580 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
TNFAIP3P21580 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.68■■□□□ 1.86
TNFAIP3P21580 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TNFAIP3P21580 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.67■■□□□ 1.86
TNFAIP3P21580 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.67■■□□□ 1.86
TNFAIP3P21580 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.66■■□□□ 1.86
TNFAIP3P21580 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
TNFAIP3P21580 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.66■■□□□ 1.86
TNFAIP3P21580 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.66■■□□□ 1.86
TNFAIP3P21580 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
TNFAIP3P21580 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.65■■□□□ 1.86
TNFAIP3P21580 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
TNFAIP3P21580 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TNFAIP3P21580 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.85
TNFAIP3P21580 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
TNFAIP3P21580 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TNFAIP3P21580 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TNFAIP3P21580 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms