Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDLIM1O00151 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDLIM1O00151 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PDLIM1O00151 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDLIM1O00151 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDLIM1O00151 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PDLIM1O00151 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
PDLIM1O00151 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.75■■□□□ 1.39
PDLIM1O00151 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.75■■□□□ 1.39
PDLIM1O00151 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDLIM1O00151 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PDLIM1O00151 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
PDLIM1O00151 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PDLIM1O00151 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.74■■□□□ 1.39
PDLIM1O00151 AC091060.1-201ENST00000623524 1766 ntBASIC23.74■■□□□ 1.39
PDLIM1O00151 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
PDLIM1O00151 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.74■■□□□ 1.39
PDLIM1O00151 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDLIM1O00151 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDLIM1O00151 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.73■■□□□ 1.39
PDLIM1O00151 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.72■■□□□ 1.39
PDLIM1O00151 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDLIM1O00151 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDLIM1O00151 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
PDLIM1O00151 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.72■■□□□ 1.39
PDLIM1O00151 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDLIM1O00151 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDLIM1O00151 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
PDLIM1O00151 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
PDLIM1O00151 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PDLIM1O00151 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PDLIM1O00151 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.72■■□□□ 1.39
PDLIM1O00151 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
PDLIM1O00151 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDLIM1O00151 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDLIM1O00151 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDLIM1O00151 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
PDLIM1O00151 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.71■■□□□ 1.39
PDLIM1O00151 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PDLIM1O00151 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
PDLIM1O00151 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PDLIM1O00151 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.7■■□□□ 1.38
PDLIM1O00151 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PDLIM1O00151 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PDLIM1O00151 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDLIM1O00151 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDLIM1O00151 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDLIM1O00151 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.68■■□□□ 1.38
PDLIM1O00151 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDLIM1O00151 MIR762-201ENST00000390236 83 ntBASIC23.67■■□□□ 1.38
PDLIM1O00151 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.67■■□□□ 1.38
PDLIM1O00151 LINC00543-201ENST00000567234 1845 ntBASIC23.67■■□□□ 1.38
PDLIM1O00151 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.67■■□□□ 1.38
PDLIM1O00151 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
PDLIM1O00151 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDLIM1O00151 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
PDLIM1O00151 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.66■■□□□ 1.38
PDLIM1O00151 AP006261.1-201ENST00000584783 668 ntBASIC23.65■■□□□ 1.38
PDLIM1O00151 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.65■■□□□ 1.38
PDLIM1O00151 AC020928.2-201ENST00000588717 2197 ntBASIC23.65■■□□□ 1.38
PDLIM1O00151 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDLIM1O00151 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PDLIM1O00151 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.64■■□□□ 1.38
PDLIM1O00151 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.64■■□□□ 1.37
PDLIM1O00151 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
PDLIM1O00151 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDLIM1O00151 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PDLIM1O00151 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
PDLIM1O00151 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDLIM1O00151 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.63■■□□□ 1.37
PDLIM1O00151 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.63■■□□□ 1.37
PDLIM1O00151 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PDLIM1O00151 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDLIM1O00151 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDLIM1O00151 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDLIM1O00151 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDLIM1O00151 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PDLIM1O00151 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.61■■□□□ 1.37
PDLIM1O00151 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDLIM1O00151 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.61■■□□□ 1.37
PDLIM1O00151 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.61■■□□□ 1.37
PDLIM1O00151 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PDLIM1O00151 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
PDLIM1O00151 AC100797.4-201ENST00000631653 1827 ntBASIC23.61■■□□□ 1.37
PDLIM1O00151 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PDLIM1O00151 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
PDLIM1O00151 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PDLIM1O00151 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDLIM1O00151 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDLIM1O00151 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDLIM1O00151 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.59■■□□□ 1.37
PDLIM1O00151 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDLIM1O00151 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.58■■□□□ 1.37
PDLIM1O00151 AL162393.1-201ENST00000437852 946 ntBASIC23.58■■□□□ 1.37
PDLIM1O00151 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.58■■□□□ 1.37
PDLIM1O00151 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PDLIM1O00151 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
PDLIM1O00151 AC127502.1-201ENST00000399971 1502 ntBASIC23.58■■□□□ 1.36
PDLIM1O00151 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDLIM1O00151 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms