Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDLIM1O00151 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDLIM1O00151 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PDLIM1O00151 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDLIM1O00151 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDLIM1O00151 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PDLIM1O00151 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
PDLIM1O00151 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.75■■□□□ 1.39
PDLIM1O00151 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.75■■□□□ 1.39
PDLIM1O00151 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDLIM1O00151 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PDLIM1O00151 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
PDLIM1O00151 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PDLIM1O00151 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.74■■□□□ 1.39
PDLIM1O00151 AC091060.1-201ENST00000623524 1766 ntBASIC23.74■■□□□ 1.39
PDLIM1O00151 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
PDLIM1O00151 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.74■■□□□ 1.39
PDLIM1O00151 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDLIM1O00151 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDLIM1O00151 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.73■■□□□ 1.39
PDLIM1O00151 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.72■■□□□ 1.39
PDLIM1O00151 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDLIM1O00151 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDLIM1O00151 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
PDLIM1O00151 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.72■■□□□ 1.39
PDLIM1O00151 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDLIM1O00151 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDLIM1O00151 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
PDLIM1O00151 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
PDLIM1O00151 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PDLIM1O00151 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PDLIM1O00151 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.72■■□□□ 1.39
PDLIM1O00151 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
PDLIM1O00151 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDLIM1O00151 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDLIM1O00151 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDLIM1O00151 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
PDLIM1O00151 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.71■■□□□ 1.39
PDLIM1O00151 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PDLIM1O00151 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
PDLIM1O00151 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PDLIM1O00151 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.7■■□□□ 1.38
PDLIM1O00151 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PDLIM1O00151 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PDLIM1O00151 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDLIM1O00151 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDLIM1O00151 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDLIM1O00151 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.68■■□□□ 1.38
PDLIM1O00151 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDLIM1O00151 MIR762-201ENST00000390236 83 ntBASIC23.67■■□□□ 1.38
PDLIM1O00151 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.67■■□□□ 1.38
PDLIM1O00151 LINC00543-201ENST00000567234 1845 ntBASIC23.67■■□□□ 1.38
PDLIM1O00151 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.67■■□□□ 1.38
PDLIM1O00151 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
PDLIM1O00151 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDLIM1O00151 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
PDLIM1O00151 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.66■■□□□ 1.38
PDLIM1O00151 AP006261.1-201ENST00000584783 668 ntBASIC23.65■■□□□ 1.38
PDLIM1O00151 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.65■■□□□ 1.38
PDLIM1O00151 AC020928.2-201ENST00000588717 2197 ntBASIC23.65■■□□□ 1.38
PDLIM1O00151 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDLIM1O00151 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PDLIM1O00151 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.64■■□□□ 1.38
PDLIM1O00151 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.64■■□□□ 1.37
PDLIM1O00151 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
PDLIM1O00151 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDLIM1O00151 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PDLIM1O00151 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
PDLIM1O00151 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDLIM1O00151 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.63■■□□□ 1.37
PDLIM1O00151 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.63■■□□□ 1.37
PDLIM1O00151 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PDLIM1O00151 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDLIM1O00151 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDLIM1O00151 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDLIM1O00151 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDLIM1O00151 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PDLIM1O00151 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.61■■□□□ 1.37
PDLIM1O00151 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDLIM1O00151 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.61■■□□□ 1.37
PDLIM1O00151 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.61■■□□□ 1.37
PDLIM1O00151 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PDLIM1O00151 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
PDLIM1O00151 AC100797.4-201ENST00000631653 1827 ntBASIC23.61■■□□□ 1.37
PDLIM1O00151 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PDLIM1O00151 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
PDLIM1O00151 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PDLIM1O00151 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDLIM1O00151 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDLIM1O00151 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDLIM1O00151 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.59■■□□□ 1.37
PDLIM1O00151 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDLIM1O00151 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.58■■□□□ 1.37
PDLIM1O00151 AL162393.1-201ENST00000437852 946 ntBASIC23.58■■□□□ 1.37
PDLIM1O00151 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.58■■□□□ 1.37
PDLIM1O00151 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PDLIM1O00151 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
PDLIM1O00151 AC127502.1-201ENST00000399971 1502 ntBASIC23.58■■□□□ 1.36
PDLIM1O00151 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDLIM1O00151 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms