Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
IGHV3-43A0A0B4J1X8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IGHV3-43A0A0B4J1X8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
IGHV3-43A0A0B4J1X8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.8■□□□□ 0.92
IGHV3-43A0A0B4J1X8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
IGHV3-43A0A0B4J1X8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IGHV3-43A0A0B4J1X8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IGHV3-43A0A0B4J1X8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.79■□□□□ 0.92
IGHV3-43A0A0B4J1X8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.79■□□□□ 0.92
IGHV3-43A0A0B4J1X8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.79■□□□□ 0.92
IGHV3-43A0A0B4J1X8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
IGHV3-43A0A0B4J1X8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IGHV3-43A0A0B4J1X8 AC018358.1-201ENST00000631079 1402 ntBASIC20.78■□□□□ 0.92
IGHV3-43A0A0B4J1X8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IGHV3-43A0A0B4J1X8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
IGHV3-43A0A0B4J1X8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IGHV3-43A0A0B4J1X8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IGHV3-43A0A0B4J1X8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
IGHV3-43A0A0B4J1X8 AC110285.7-201ENST00000624417 1536 ntBASIC20.77■□□□□ 0.92
IGHV3-43A0A0B4J1X8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IGHV3-43A0A0B4J1X8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
IGHV3-43A0A0B4J1X8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
IGHV3-43A0A0B4J1X8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
IGHV3-43A0A0B4J1X8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IGHV3-43A0A0B4J1X8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.76■□□□□ 0.91
IGHV3-43A0A0B4J1X8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
IGHV3-43A0A0B4J1X8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IGHV3-43A0A0B4J1X8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
IGHV3-43A0A0B4J1X8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.75■□□□□ 0.91
IGHV3-43A0A0B4J1X8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.75■□□□□ 0.91
IGHV3-43A0A0B4J1X8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
IGHV3-43A0A0B4J1X8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IGHV3-43A0A0B4J1X8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IGHV3-43A0A0B4J1X8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
IGHV3-43A0A0B4J1X8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.74■□□□□ 0.91
IGHV3-43A0A0B4J1X8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.74■□□□□ 0.91
IGHV3-43A0A0B4J1X8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.74■□□□□ 0.91
IGHV3-43A0A0B4J1X8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
IGHV3-43A0A0B4J1X8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IGHV3-43A0A0B4J1X8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
IGHV3-43A0A0B4J1X8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IGHV3-43A0A0B4J1X8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
IGHV3-43A0A0B4J1X8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IGHV3-43A0A0B4J1X8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.73■□□□□ 0.91
IGHV3-43A0A0B4J1X8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
IGHV3-43A0A0B4J1X8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.73■□□□□ 0.91
IGHV3-43A0A0B4J1X8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
IGHV3-43A0A0B4J1X8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
IGHV3-43A0A0B4J1X8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
IGHV3-43A0A0B4J1X8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IGHV3-43A0A0B4J1X8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IGHV3-43A0A0B4J1X8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
IGHV3-43A0A0B4J1X8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.71■□□□□ 0.91
IGHV3-43A0A0B4J1X8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
IGHV3-43A0A0B4J1X8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
IGHV3-43A0A0B4J1X8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
IGHV3-43A0A0B4J1X8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
IGHV3-43A0A0B4J1X8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
IGHV3-43A0A0B4J1X8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
IGHV3-43A0A0B4J1X8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.69■□□□□ 0.9
IGHV3-43A0A0B4J1X8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.69■□□□□ 0.9
IGHV3-43A0A0B4J1X8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
IGHV3-43A0A0B4J1X8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
IGHV3-43A0A0B4J1X8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.68■□□□□ 0.9
IGHV3-43A0A0B4J1X8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
IGHV3-43A0A0B4J1X8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
IGHV3-43A0A0B4J1X8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IGHV3-43A0A0B4J1X8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
IGHV3-43A0A0B4J1X8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IGHV3-43A0A0B4J1X8 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IGHV3-43A0A0B4J1X8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
IGHV3-43A0A0B4J1X8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.67■□□□□ 0.9
IGHV3-43A0A0B4J1X8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
IGHV3-43A0A0B4J1X8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
IGHV3-43A0A0B4J1X8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IGHV3-43A0A0B4J1X8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.66■□□□□ 0.9
IGHV3-43A0A0B4J1X8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.66■□□□□ 0.9
IGHV3-43A0A0B4J1X8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.66■□□□□ 0.9
IGHV3-43A0A0B4J1X8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IGHV3-43A0A0B4J1X8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
IGHV3-43A0A0B4J1X8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IGHV3-43A0A0B4J1X8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IGHV3-43A0A0B4J1X8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IGHV3-43A0A0B4J1X8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
IGHV3-43A0A0B4J1X8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.65■□□□□ 0.9
IGHV3-43A0A0B4J1X8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.64■□□□□ 0.9
IGHV3-43A0A0B4J1X8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
IGHV3-43A0A0B4J1X8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IGHV3-43A0A0B4J1X8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.64■□□□□ 0.89
IGHV3-43A0A0B4J1X8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
IGHV3-43A0A0B4J1X8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IGHV3-43A0A0B4J1X8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
IGHV3-43A0A0B4J1X8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
IGHV3-43A0A0B4J1X8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.64■□□□□ 0.89
IGHV3-43A0A0B4J1X8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IGHV3-43A0A0B4J1X8 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.63■□□□□ 0.89
IGHV3-43A0A0B4J1X8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.63■□□□□ 0.89
IGHV3-43A0A0B4J1X8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.63■□□□□ 0.89
IGHV3-43A0A0B4J1X8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.63■□□□□ 0.89
IGHV3-43A0A0B4J1X8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 194 ms