RNA–Protein interactions for RNA: snR58

snR58, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR58, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR58snR58 FAP1P53971 965 aa3.03□□□□□ -1.92
snR58snR58 PRY3P47033 881 aa2.94□□□□□ -1.94
snR58snR58 YCK3P39962 524 aa2.81□□□□□ -1.96
snR58snR58 BUD31P25337 157 aaPredicted RBP2.62□□□□□ -1.99
snR58snR58 HAA1Q12753 694 aaKnown RBP2.57□□□□□ -2
snR58snR58 SIS1P25294 352 aaKnown RBP2.34□□□□□ -2.03
snR58snR58 AAD16Q02895 342 aa2.23□□□□□ -2.05
snR58snR58 RGA2Q06407 1009 aa2.17□□□□□ -2.06
snR58snR58 PRI1P10363 409 aa2.08□□□□□ -2.08
snR58snR58 YGL015CP33199 130 aa2.08□□□□□ -2.08
snR58snR58 TSR3Q12094 313 aaKnown RBP1.95□□□□□ -2.1
snR58snR58 UBP9P39967 754 aa1.87□□□□□ -2.11
snR58snR58 MRPL32P25348 183 aa1.77□□□□□ -2.13
snR58snR58 RGA1P39083 1007 aa1.77□□□□□ -2.13
snR58snR58 MAP2P38174 421 aaKnown RBP1.63□□□□□ -2.15
snR58snR58 RPG1P38249 964 aaKnown RBP1.6□□□□□ -2.15
snR58snR58 YJL171CP46992 396 aa1.59□□□□□ -2.15
snR58snR58 AIR2Q12476 344 aaKnown RBP1.59□□□□□ -2.15
snR58snR58 YBL029C-AQ3E756 94 aa1.59□□□□□ -2.15
snR58snR58 UBP10P53874 792 aaPredicted RBP1.56□□□□□ -2.16
snR58snR58 CDC27P38042 758 aa1.53□□□□□ -2.16
snR58snR58 TGL3P40308 642 aa1.5□□□□□ -2.17
snR58snR58 FKH1P40466 484 aa1.5□□□□□ -2.17
snR58snR58 ISW2Q08773 1120 aa1.49□□□□□ -2.17
snR58snR58 MTC1P47018 478 aaKnown RBP1.48□□□□□ -2.17
snR58snR58 TIF4632P39936 914 aaKnown RBP1.47□□□□□ -2.17
snR58snR58 BMT6Q12291 365 aa1.45□□□□□ -2.18
snR58snR58 VNX1P42839 908 aa1.44□□□□□ -2.18
snR58snR58 SPP1Q03012 353 aa1.41□□□□□ -2.18
snR58snR58 SRC1Q03707 834 aa1.34□□□□□ -2.19
snR58snR58 SLX5P32828 619 aaKnown RBP1.33□□□□□ -2.2
snR58snR58 BCK2P33306 851 aa1.33□□□□□ -2.2
snR58snR58 SCY1P53009 804 aa1.32□□□□□ -2.2
snR58snR58 WSC3Q12215 556 aa1.32□□□□□ -2.2
snR58snR58 LDB19Q12502 818 aa1.31□□□□□ -2.2
snR58snR58 MST1P07236 462 aa1.28□□□□□ -2.2
snR58snR58 DPS1P04802 557 aaKnown RBP1.27□□□□□ -2.21
snR58snR58 TIF11P38912 153 aaKnown RBP1.27□□□□□ -2.21
snR58snR58 YPL062WQ02781 134 aa1.26□□□□□ -2.21
snR58snR58 DCD1P06773 312 aa1.24□□□□□ -2.21
snR58snR58 AVT3P36062 692 aa1.21□□□□□ -2.22
snR58snR58 IOC2Q12072 812 aa1.21□□□□□ -2.22
snR58snR58 YOR238WQ08634 303 aa1.19□□□□□ -2.22
snR58snR58 NCR1Q12200 1170 aa1.19□□□□□ -2.22
snR58snR58 XDJ1P39102 459 aa1.17□□□□□ -2.22
snR58snR58 ULI1P43604 169 aa1.17□□□□□ -2.22
snR58snR58 HOP09932 586 aa1.15□□□□□ -2.23
snR58snR58 YKR023WP36119 530 aaKnown RBP1.15□□□□□ -2.23
snR58snR58 RTG1P32607 177 aa1.12□□□□□ -2.23
snR58snR58 VRP1P37370 817 aa1.12□□□□□ -2.23
snR58snR58 CHL1P22516 861 aaPredicted RBP1.09□□□□□ -2.23
snR58snR58 TFC8Q12308 588 aa1.08□□□□□ -2.24
snR58snR58 SAP30P38429 201 aa1.06□□□□□ -2.24
snR58snR58 PRE3P38624 215 aa1.05□□□□□ -2.24
snR58snR58 REB1P21538 810 aa1.03□□□□□ -2.24
snR58snR58 DAN4P47179 1161 aa1.03□□□□□ -2.24
snR58snR58 BCH2P36122 765 aa1.01□□□□□ -2.25
snR58snR58 GTT3P39996 337 aa1.01□□□□□ -2.25
snR58snR58 YDR344CQ05510 147 aa1□□□□□ -2.25
snR58snR58 TRP5P00931 707 aaKnown RBP0.98□□□□□ -2.25
snR58snR58 SEC61P32915 480 aa0.98□□□□□ -2.25
snR58snR58 RAS1P01119 309 aa0.97□□□□□ -2.25
snR58snR58 NSR1P27476 414 aaKnown RBP RIP-Chip data0.97□□□□□ -2.25not detected
snR58snR58 GAR1P28007 205 aaKnown RBP0.97□□□□□ -2.25
snR58snR58 YAP5P40574 245 aa0.97□□□□□ -2.25
snR58snR58 YNL035CP53962 389 aaKnown RBP0.97□□□□□ -2.25
snR58snR58 MTC5Q03897 1148 aa0.97□□□□□ -2.25
snR58snR58 TRK1P12685 1235 aa0.95□□□□□ -2.26
snR58snR58 RPL17AP05740 184 aaKnown RBP0.94□□□□□ -2.26
snR58snR58 GBP2P25555 427 aaKnown RBP RIP-Chip data0.94□□□□□ -2.26not detected
snR58snR58 RPL17BP46990 184 aaKnown RBP0.94□□□□□ -2.26
snR58snR58 TFG1P41895 735 aaPredicted RBP0.92□□□□□ -2.26
snR58snR58 EAP1P36041 632 aaKnown RBP0.91□□□□□ -2.26
snR58snR58 YDL129WQ07555 291 aa0.91□□□□□ -2.26
snR58snR58 BDF1P35817 686 aa0.9□□□□□ -2.27
snR58snR58 NRD1P53617 575 aaKnown RBP RIP-Chip data0.9□□□□□ -2.27not detected
snR58snR58 SET4P42948 560 aa0.89□□□□□ -2.27
snR58snR58 PIB1Q06651 286 aa0.89□□□□□ -2.27
snR58snR58 MSB4Q12317 492 aa0.88□□□□□ -2.27
snR58snR58 EPS1P40557 701 aa0.87□□□□□ -2.27
snR58snR58 YOL036WQ08206 761 aa0.86□□□□□ -2.27
snR58snR58 ELP4Q02884 456 aaKnown RBP0.84□□□□□ -2.27
snR58snR58 RSE1Q04693 1361 aaKnown RBP0.83□□□□□ -2.28
snR58snR58 SPT21P35209 758 aa0.8□□□□□ -2.28
snR58snR58 PEX29Q03370 554 aa0.8□□□□□ -2.28
snR58snR58 BRE2P43132 505 aa0.77□□□□□ -2.29
snR58snR58 YDL176WQ12027 708 aa0.77□□□□□ -2.29
snR58snR58 LSB3P43603 459 aaKnown RBP0.75□□□□□ -2.29
snR58snR58 AMS1P22855 1083 aa0.74□□□□□ -2.29
snR58snR58 OXP1P28273 1286 aa0.73□□□□□ -2.29
snR58snR58 MET22P32179 357 aa0.73□□□□□ -2.29
snR58snR58 JIP4Q03361 876 aa0.73□□□□□ -2.29
snR58snR58 ARH1P48360 493 aa0.7□□□□□ -2.3
snR58snR58 SPT23P35210 1082 aa0.69□□□□□ -2.3
snR58snR58 PML39Q03760 334 aa0.69□□□□□ -2.3
snR58snR58 AIR1P40507 360 aaKnown RBP0.68□□□□□ -2.3
snR58snR58 ENV9Q08651 330 aa0.68□□□□□ -2.3
snR58snR58 SDH2P21801 266 aa0.67□□□□□ -2.3
snR58snR58 GCR2Q01722 534 aa0.66□□□□□ -2.3
snR58snR58 PTC4P38089 393 aa0.65□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms