RNA–Protein interactions for RNA: YOR303W

CPA1, Transcript of Small subunit of carbamoyl phosphate synthetase, yeastyeast

Gene CPA1, Length 1,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPA1YOR303W MTC1P47018 478 aaKnown RBP15.53■□□□□ 0.08
CPA1YOR303W FAP1P53971 965 aa14.6□□□□□ -0.07
CPA1YOR303W DRS1P32892 752 aaKnown RBP13.92□□□□□ -0.18
CPA1YOR303W PRY3P47033 881 aa13.77□□□□□ -0.21
CPA1YOR303W PRI1P10363 409 aa13.43□□□□□ -0.26
CPA1YOR303W AAD16Q02895 342 aa13.41□□□□□ -0.26
CPA1YOR303W YCK3P39962 524 aa13.11□□□□□ -0.31
CPA1YOR303W ISW2Q08773 1120 aa12.94□□□□□ -0.34
CPA1YOR303W RPG1P38249 964 aaKnown RBP12.88□□□□□ -0.35
CPA1YOR303W HAA1Q12753 694 aaKnown RBP12.85□□□□□ -0.35
CPA1YOR303W TSR3Q12094 313 aaKnown RBP12.68□□□□□ -0.38
CPA1YOR303W DIP2Q12220 943 aaPredicted RBP12.42□□□□□ -0.42
CPA1YOR303W RSE1Q04693 1361 aaKnown RBP12.14□□□□□ -0.47
CPA1YOR303W MRPL32P25348 183 aa12.12□□□□□ -0.47
CPA1YOR303W AVT3P36062 692 aa11.83□□□□□ -0.52
CPA1YOR303W RPL17AP05740 184 aaKnown RBP11.82□□□□□ -0.52
CPA1YOR303W RPL17BP46990 184 aaKnown RBP11.82□□□□□ -0.52
CPA1YOR303W YGL015CP33199 130 aa11.78□□□□□ -0.52
CPA1YOR303W REB1P21538 810 aa11.77□□□□□ -0.53
CPA1YOR303W CDC27P38042 758 aa11.51□□□□□ -0.57
CPA1YOR303W YKR023WP36119 530 aaKnown RBP11.33□□□□□ -0.6
CPA1YOR303W SPT21P35209 758 aa11.31□□□□□ -0.6
CPA1YOR303W BFR2Q06631 534 aaKnown RBP11.27□□□□□ -0.61
CPA1YOR303W BUD31P25337 157 aaPredicted RBP11.22□□□□□ -0.61
CPA1YOR303W MAP2P38174 421 aaKnown RBP11.18□□□□□ -0.62
CPA1YOR303W UBP10P53874 792 aaPredicted RBP11.16□□□□□ -0.62
CPA1YOR303W HOP09932 586 aa11.09□□□□□ -0.63
CPA1YOR303W DCD1P06773 312 aa11.08□□□□□ -0.64
CPA1YOR303W TFC8Q12308 588 aa11.07□□□□□ -0.64
CPA1YOR303W SCY1P53009 804 aa10.84□□□□□ -0.67
CPA1YOR303W RIM101P33400 625 aa10.77□□□□□ -0.69
CPA1YOR303W SLX5P32828 619 aaKnown RBP10.7□□□□□ -0.7
CPA1YOR303W BCH2P36122 765 aa10.7□□□□□ -0.7
CPA1YOR303W TGL3P40308 642 aa10.68□□□□□ -0.7
CPA1YOR303W TIF4632P39936 914 aaKnown RBP10.67□□□□□ -0.7
CPA1YOR303W SIS1P25294 352 aaKnown RBP10.56□□□□□ -0.72
CPA1YOR303W UBP9P39967 754 aa10.47□□□□□ -0.73
CPA1YOR303W OXP1P28273 1286 aa10.43□□□□□ -0.74
CPA1YOR303W EPS1P40557 701 aa10.37□□□□□ -0.75
CPA1YOR303W BDF1P35817 686 aa10.35□□□□□ -0.75
CPA1YOR303W MST1P07236 462 aa10.2□□□□□ -0.78
CPA1YOR303W PTP3P40048 928 aa10.2□□□□□ -0.78
CPA1YOR303W YIL055CP40523 627 aaKnown RBP10.17□□□□□ -0.78
CPA1YOR303W YBL029C-AQ3E756 94 aa10.12□□□□□ -0.79
CPA1YOR303W YOR238WQ08634 303 aa10.09□□□□□ -0.79
CPA1YOR303W RSM7P47150 247 aa10.07□□□□□ -0.8
CPA1YOR303W AI2P03876 854 aa10.03□□□□□ -0.8
CPA1YOR303W NSR1P27476 414 aaKnown RBP RIP-Chip data10.03□□□□□ -0.8not detected
CPA1YOR303W BBC1P47068 1157 aa10.01□□□□□ -0.81
CPA1YOR303W YAH1Q12184 172 aaKnown RBP9.99□□□□□ -0.81
CPA1YOR303W VNX1P42839 908 aa9.98□□□□□ -0.81
CPA1YOR303W YAP5P40574 245 aa9.94□□□□□ -0.82
CPA1YOR303W WSC3Q12215 556 aa9.87□□□□□ -0.83
CPA1YOR303W SPP1Q03012 353 aa9.86□□□□□ -0.83
CPA1YOR303W YLR271WQ06152 274 aa9.83□□□□□ -0.84
CPA1YOR303W TIF11P38912 153 aaKnown RBP9.74□□□□□ -0.85
CPA1YOR303W PSD2P53037 1138 aaKnown RBP9.74□□□□□ -0.85
CPA1YOR303W AIR2Q12476 344 aaKnown RBP9.74□□□□□ -0.85
CPA1YOR303W GTT3P39996 337 aa9.71□□□□□ -0.86
CPA1YOR303W FKH1P40466 484 aa9.7□□□□□ -0.86
CPA1YOR303W PIB1Q06651 286 aa9.7□□□□□ -0.86
CPA1YOR303W MRM1P25270 412 aa9.64□□□□□ -0.87
CPA1YOR303W TFA1P36100 482 aa9.61□□□□□ -0.87
CPA1YOR303W IOC2Q12072 812 aa9.61□□□□□ -0.87
CPA1YOR303W ULI1P43604 169 aa9.6□□□□□ -0.87
CPA1YOR303W LDB19Q12502 818 aa9.6□□□□□ -0.87
CPA1YOR303W YJL171CP46992 396 aa9.59□□□□□ -0.87
CPA1YOR303W SSP1P38871 571 aa9.5□□□□□ -0.89
CPA1YOR303W VPS29P38759 282 aa9.47□□□□□ -0.89
CPA1YOR303W CST9Q06032 482 aa9.47□□□□□ -0.89
CPA1YOR303W MSB4Q12317 492 aa9.47□□□□□ -0.89
CPA1YOR303W BMT6Q12291 365 aa9.46□□□□□ -0.9
CPA1YOR303W YOL036WQ08206 761 aa9.45□□□□□ -0.9
CPA1YOR303W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.45□□□□□ -0.9not detected
CPA1YOR303W SET4P42948 560 aa9.44□□□□□ -0.9
CPA1YOR303W DBP1P24784 617 aaKnown RBP9.43□□□□□ -0.9
CPA1YOR303W YMR1P47147 688 aaKnown RBP RIP-Chip data9.42□□□□□ -0.9not detected
CPA1YOR303W YFR006WP43590 535 aa9.41□□□□□ -0.9
CPA1YOR303W TRP5P00931 707 aaKnown RBP9.4□□□□□ -0.9
CPA1YOR303W EAP1P36041 632 aaKnown RBP9.4□□□□□ -0.9
CPA1YOR303W STS1P38637 319 aa9.39□□□□□ -0.91
CPA1YOR303W RTG1P32607 177 aa9.38□□□□□ -0.91
CPA1YOR303W VMA1P17255 1071 aaKnown RBP9.35□□□□□ -0.91
CPA1YOR303W RTG3P38165 486 aa9.35□□□□□ -0.91
CPA1YOR303W MGA2P40578 1113 aa9.34□□□□□ -0.91
CPA1YOR303W NCR1Q12200 1170 aa9.33□□□□□ -0.92
CPA1YOR303W RCR1P38212 213 aa9.32□□□□□ -0.92
CPA1YOR303W SAM3Q08986 587 aa9.31□□□□□ -0.92
CPA1YOR303W YNL035CP53962 389 aaKnown RBP9.29□□□□□ -0.92
CPA1YOR303W SEC61P32915 480 aa9.26□□□□□ -0.93
CPA1YOR303W DAN4P47179 1161 aa9.19□□□□□ -0.94
CPA1YOR303W GYP5Q12344 894 aa9.14□□□□□ -0.95
CPA1YOR303W SAP30P38429 201 aa9.12□□□□□ -0.95
CPA1YOR303W JIP4Q03361 876 aa9.11□□□□□ -0.95
CPA1YOR303W DCW1P36091 449 aa9.1□□□□□ -0.95
CPA1YOR303W TFG1P41895 735 aaPredicted RBP9.1□□□□□ -0.95
CPA1YOR303W ABP1P15891 592 aaKnown RBP9.07□□□□□ -0.96
CPA1YOR303W HTA1P04911 132 aaKnown RBP9.06□□□□□ -0.96
CPA1YOR303W HTA2P04912 132 aa9.06□□□□□ -0.96
CPA1YOR303W YDL129WQ07555 291 aa9.06□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms