RNA–Protein interactions for RNA: YOR075W

UFE1, Transcript of t-SNARE protein required for retrograde vesicular traffic, yeastyeast

Gene UFE1, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFE1YOR075W MTC1P47018 478 aaKnown RBP13.82□□□□□ -0.2
UFE1YOR075W DRS1P32892 752 aaKnown RBP13.68□□□□□ -0.22
UFE1YOR075W FAP1P53971 965 aa12.85□□□□□ -0.35
UFE1YOR075W PRY3P47033 881 aa12.15□□□□□ -0.46
UFE1YOR075W BFR2Q06631 534 aaKnown RBP11.77□□□□□ -0.53
UFE1YOR075W DIP2Q12220 943 aaPredicted RBP11.71□□□□□ -0.53
UFE1YOR075W AVT3P36062 692 aa11.52□□□□□ -0.57
UFE1YOR075W AAD16Q02895 342 aa11.5□□□□□ -0.57
UFE1YOR075W PRI1P10363 409 aa11.46□□□□□ -0.57
UFE1YOR075W YCK3P39962 524 aa11.39□□□□□ -0.59
UFE1YOR075W ISW2Q08773 1120 aa11.31□□□□□ -0.6
UFE1YOR075W HAA1Q12753 694 aaKnown RBP11.28□□□□□ -0.6
UFE1YOR075W RSE1Q04693 1361 aaKnown RBP11.13□□□□□ -0.63
UFE1YOR075W RPG1P38249 964 aaKnown RBP11.12□□□□□ -0.63
UFE1YOR075W TFA1P36100 482 aa10.96□□□□□ -0.65
UFE1YOR075W TSR3Q12094 313 aaKnown RBP10.82□□□□□ -0.68
UFE1YOR075W RPL17AP05740 184 aaKnown RBP10.7□□□□□ -0.7
UFE1YOR075W RPL17BP46990 184 aaKnown RBP10.7□□□□□ -0.7
UFE1YOR075W REB1P21538 810 aa10.6□□□□□ -0.71
UFE1YOR075W MRPL32P25348 183 aa10.44□□□□□ -0.74
UFE1YOR075W SPT21P35209 758 aa10.32□□□□□ -0.76
UFE1YOR075W YGL015CP33199 130 aa10.18□□□□□ -0.78
UFE1YOR075W RIM101P33400 625 aa10.12□□□□□ -0.79
UFE1YOR075W BUD31P25337 157 aaPredicted RBP10.01□□□□□ -0.81
UFE1YOR075W YKR023WP36119 530 aaKnown RBP9.99□□□□□ -0.81
UFE1YOR075W CDC27P38042 758 aa9.82□□□□□ -0.84
UFE1YOR075W TFC8Q12308 588 aa9.81□□□□□ -0.84
UFE1YOR075W OXP1P28273 1286 aa9.78□□□□□ -0.84
UFE1YOR075W HOP09932 586 aa9.77□□□□□ -0.85
UFE1YOR075W DCD1P06773 312 aa9.69□□□□□ -0.86
UFE1YOR075W YIL055CP40523 627 aaKnown RBP9.67□□□□□ -0.86
UFE1YOR075W PTP3P40048 928 aa9.63□□□□□ -0.87
UFE1YOR075W YAH1Q12184 172 aaKnown RBP9.6□□□□□ -0.87
UFE1YOR075W SSP1P38871 571 aa9.59□□□□□ -0.87
UFE1YOR075W UBP10P53874 792 aaPredicted RBP9.57□□□□□ -0.88
UFE1YOR075W MAP2P38174 421 aaKnown RBP9.53□□□□□ -0.88
UFE1YOR075W RSM7P47150 247 aa9.51□□□□□ -0.89
UFE1YOR075W BCH2P36122 765 aa9.5□□□□□ -0.89
UFE1YOR075W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.49□□□□□ -0.89not detected
UFE1YOR075W YLR271WQ06152 274 aa9.48□□□□□ -0.89
UFE1YOR075W SCY1P53009 804 aa9.4□□□□□ -0.9
UFE1YOR075W SIS1P25294 352 aaKnown RBP9.39□□□□□ -0.91
UFE1YOR075W AI2P03876 854 aa9.36□□□□□ -0.91
UFE1YOR075W BBC1P47068 1157 aa9.35□□□□□ -0.91
UFE1YOR075W EPS1P40557 701 aa9.34□□□□□ -0.91
UFE1YOR075W MGA2P40578 1113 aa9.29□□□□□ -0.92
UFE1YOR075W PSD2P53037 1138 aaKnown RBP9.28□□□□□ -0.92
UFE1YOR075W BDF1P35817 686 aa9.27□□□□□ -0.93
UFE1YOR075W SLX5P32828 619 aaKnown RBP9.25□□□□□ -0.93
UFE1YOR075W TIF4632P39936 914 aaKnown RBP9.23□□□□□ -0.93
UFE1YOR075W CST9Q06032 482 aa9.18□□□□□ -0.94
UFE1YOR075W TGL3P40308 642 aa9.16□□□□□ -0.94
UFE1YOR075W RQC2Q12532 1038 aaKnown RBP9.13□□□□□ -0.95
UFE1YOR075W UBP9P39967 754 aa9.12□□□□□ -0.95
UFE1YOR075W MRM1P25270 412 aa9.06□□□□□ -0.96
UFE1YOR075W RTG3P38165 486 aa8.94□□□□□ -0.98
UFE1YOR075W NSR1P27476 414 aaKnown RBP RIP-Chip data8.93□□□□□ -0.98not detected
UFE1YOR075W DMA1P38823 416 aa8.9□□□□□ -0.98
UFE1YOR075W RCR1P38212 213 aa8.88□□□□□ -0.99
UFE1YOR075W YAP5P40574 245 aa8.85□□□□□ -0.99
UFE1YOR075W RAM2P29703 316 aa8.84□□□□□ -0.99
UFE1YOR075W VPS29P38759 282 aa8.84□□□□□ -0.99
UFE1YOR075W YMR1P47147 688 aaKnown RBP RIP-Chip data8.81□□□□□ -1not detected
UFE1YOR075W YOR238WQ08634 303 aa8.79□□□□□ -1
UFE1YOR075W MST1P07236 462 aa8.75□□□□□ -1.01
UFE1YOR075W MAK11P20484 414 aaKnown RBP8.75□□□□□ -1.01
UFE1YOR075W STS1P38637 319 aa8.74□□□□□ -1.01
UFE1YOR075W DBP1P24784 617 aaKnown RBP8.73□□□□□ -1.01
UFE1YOR075W YFR006WP43590 535 aa8.69□□□□□ -1.02
UFE1YOR075W PIB1Q06651 286 aa8.67□□□□□ -1.02
UFE1YOR075W YBL029C-AQ3E756 94 aa8.67□□□□□ -1.02
UFE1YOR075W COQ8P27697 501 aa8.61□□□□□ -1.03
UFE1YOR075W SET1P38827 1080 aaKnown RBP8.61□□□□□ -1.03
UFE1YOR075W GTT3P39996 337 aa8.61□□□□□ -1.03
UFE1YOR075W VMA1P17255 1071 aaKnown RBP8.6□□□□□ -1.03
UFE1YOR075W MIF2P35201 549 aa8.58□□□□□ -1.04
UFE1YOR075W NOP53Q12080 455 aaKnown RBP8.58□□□□□ -1.04
UFE1YOR075W EDS1P38073 919 aa8.55□□□□□ -1.04
UFE1YOR075W SAS10Q12136 610 aaPredicted RBP8.55□□□□□ -1.04
UFE1YOR075W IFH1P39520 1085 aa8.54□□□□□ -1.04
UFE1YOR075W SAM3Q08986 587 aa8.54□□□□□ -1.04
UFE1YOR075W VNX1P42839 908 aa8.53□□□□□ -1.04
UFE1YOR075W PTC3P34221 468 aaKnown RBP8.5□□□□□ -1.05
UFE1YOR075W SPP1Q03012 353 aa8.49□□□□□ -1.05
UFE1YOR075W YPR148CQ06523 435 aa8.49□□□□□ -1.05
UFE1YOR075W WSC3Q12215 556 aa8.47□□□□□ -1.05
UFE1YOR075W YOL036WQ08206 761 aa8.46□□□□□ -1.06
UFE1YOR075W GRE2Q12068 342 aaKnown RBP8.46□□□□□ -1.06
UFE1YOR075W MSB4Q12317 492 aa8.46□□□□□ -1.06
UFE1YOR075W ABP1P15891 592 aaKnown RBP8.44□□□□□ -1.06
UFE1YOR075W GYP5Q12344 894 aa8.44□□□□□ -1.06
UFE1YOR075W SET4P42948 560 aa8.42□□□□□ -1.06
UFE1YOR075W ATH1P48016 1211 aa8.42□□□□□ -1.06
UFE1YOR075W GUT1P32190 709 aa8.41□□□□□ -1.06
UFE1YOR075W VPS70P47161 811 aa8.41□□□□□ -1.06
UFE1YOR075W EAP1P36041 632 aaKnown RBP8.38□□□□□ -1.07
UFE1YOR075W CKB1P43639 278 aa8.38□□□□□ -1.07
UFE1YOR075W TIF11P38912 153 aaKnown RBP8.36□□□□□ -1.07
UFE1YOR075W YJL171CP46992 396 aa8.36□□□□□ -1.07
UFE1YOR075W HTA1P04911 132 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms