RNA–Protein interactions for RNA: YNL039W

BDP1, Transcript of Essential subunit of RNA polymerase III transcription factor (TFIIIB), yeastyeast

Gene BDP1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDP1YNL039W DRS1P32892 752 aaKnown RBP11.69□□□□□ -0.54
BDP1YNL039W MTC1P47018 478 aaKnown RBP10.85□□□□□ -0.67
BDP1YNL039W BFR2Q06631 534 aaKnown RBP10.46□□□□□ -0.74
BDP1YNL039W TFA1P36100 482 aa10.39□□□□□ -0.75
BDP1YNL039W AVT3P36062 692 aa9.78□□□□□ -0.84
BDP1YNL039W DIP2Q12220 943 aaPredicted RBP9.68□□□□□ -0.86
BDP1YNL039W RQC2Q12532 1038 aaKnown RBP9.66□□□□□ -0.86
BDP1YNL039W RSE1Q04693 1361 aaKnown RBP8.92□□□□□ -0.98
BDP1YNL039W TAF7Q05021 590 aa8.89□□□□□ -0.99
BDP1YNL039W DMA1P38823 416 aa8.86□□□□□ -0.99
BDP1YNL039W ISW2Q08773 1120 aa8.65□□□□□ -1.02
BDP1YNL039W FAP1P53971 965 aa8.61□□□□□ -1.03
BDP1YNL039W PTP3P40048 928 aa8.54□□□□□ -1.04
BDP1YNL039W RPL17AP05740 184 aaKnown RBP8.53□□□□□ -1.04
BDP1YNL039W RPL17BP46990 184 aaKnown RBP8.53□□□□□ -1.04
BDP1YNL039W LEO1P38439 464 aa8.51□□□□□ -1.05
BDP1YNL039W RPG1P38249 964 aaKnown RBP8.5□□□□□ -1.05
BDP1YNL039W REB1P21538 810 aa8.36□□□□□ -1.07
BDP1YNL039W RIM101P33400 625 aa8.35□□□□□ -1.07
BDP1YNL039W SSP1P38871 571 aa8.34□□□□□ -1.07
BDP1YNL039W SPT21P35209 758 aa8.29□□□□□ -1.08
BDP1YNL039W PRI1P10363 409 aa8.27□□□□□ -1.09
BDP1YNL039W LEU3P08638 886 aa8.18□□□□□ -1.1
BDP1YNL039W SAS10Q12136 610 aaPredicted RBP8.15□□□□□ -1.1
BDP1YNL039W PRY3P47033 881 aa8.13□□□□□ -1.11
BDP1YNL039W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.12□□□□□ -1.11not detected
BDP1YNL039W OXP1P28273 1286 aa8.12□□□□□ -1.11
BDP1YNL039W YAH1Q12184 172 aaKnown RBP8.08□□□□□ -1.12
BDP1YNL039W YLR271WQ06152 274 aa8.02□□□□□ -1.13
BDP1YNL039W AAD16Q02895 342 aa8.01□□□□□ -1.13
BDP1YNL039W YIL055CP40523 627 aaKnown RBP7.99□□□□□ -1.13
BDP1YNL039W MGA2P40578 1113 aa7.96□□□□□ -1.14
BDP1YNL039W RPN1P38764 993 aaKnown RBP7.89□□□□□ -1.15
BDP1YNL039W TSR3Q12094 313 aaKnown RBP7.88□□□□□ -1.15
BDP1YNL039W RSM7P47150 247 aa7.87□□□□□ -1.15
BDP1YNL039W DMA2P53924 522 aa7.87□□□□□ -1.15
BDP1YNL039W YKR023WP36119 530 aaKnown RBP7.84□□□□□ -1.15
BDP1YNL039W CST9Q06032 482 aa7.82□□□□□ -1.16
BDP1YNL039W PSD2P53037 1138 aaKnown RBP7.73□□□□□ -1.17
BDP1YNL039W SPB4P25808 606 aaPredicted RBP7.71□□□□□ -1.18
BDP1YNL039W CKB1P43639 278 aa7.7□□□□□ -1.18
BDP1YNL039W RLF2Q12495 606 aa7.7□□□□□ -1.18
BDP1YNL039W TFC8Q12308 588 aa7.69□□□□□ -1.18
BDP1YNL039W AI2P03876 854 aa7.67□□□□□ -1.18
BDP1YNL039W HOP09932 586 aa7.67□□□□□ -1.18
BDP1YNL039W ABP1P15891 592 aaKnown RBP7.66□□□□□ -1.18
BDP1YNL039W SET1P38827 1080 aaKnown RBP7.66□□□□□ -1.18
BDP1YNL039W YPR148CQ06523 435 aa7.66□□□□□ -1.18
BDP1YNL039W RAM2P29703 316 aa7.64□□□□□ -1.19
BDP1YNL039W YCK3P39962 524 aa7.64□□□□□ -1.19
BDP1YNL039W VPS70P47161 811 aa7.64□□□□□ -1.19
BDP1YNL039W IFH1P39520 1085 aa7.61□□□□□ -1.19
BDP1YNL039W DCD1P06773 312 aa7.59□□□□□ -1.2
BDP1YNL039W MRPL32P25348 183 aa7.57□□□□□ -1.2
BDP1YNL039W BBC1P47068 1157 aa7.57□□□□□ -1.2
BDP1YNL039W DSF2P38213 736 aa7.54□□□□□ -1.2
BDP1YNL039W HAA1Q12753 694 aaKnown RBP7.54□□□□□ -1.2
BDP1YNL039W KIN1P13185 1064 aa7.5□□□□□ -1.21
BDP1YNL039W YNR021WP53723 404 aaKnown RBP7.5□□□□□ -1.21
BDP1YNL039W PBS2P08018 668 aa7.49□□□□□ -1.21
BDP1YNL039W BCH2P36122 765 aa7.49□□□□□ -1.21
BDP1YNL039W RCR1P38212 213 aa7.48□□□□□ -1.21
BDP1YNL039W MRM1P25270 412 aa7.48□□□□□ -1.21
BDP1YNL039W CDC27P38042 758 aa7.48□□□□□ -1.21
BDP1YNL039W MAK11P20484 414 aaKnown RBP7.46□□□□□ -1.21
BDP1YNL039W HGH1P48362 394 aaKnown RBP7.46□□□□□ -1.21
BDP1YNL039W RTG3P38165 486 aa7.43□□□□□ -1.22
BDP1YNL039W EPS1P40557 701 aa7.42□□□□□ -1.22
BDP1YNL039W AIM7Q12156 149 aa7.42□□□□□ -1.22
BDP1YNL039W GLC3P32775 704 aa7.4□□□□□ -1.23
BDP1YNL039W MAM3Q12296 706 aa7.39□□□□□ -1.23
BDP1YNL039W COQ8P27697 501 aa7.35□□□□□ -1.23
BDP1YNL039W BDF1P35817 686 aa7.35□□□□□ -1.23
BDP1YNL039W IES2P40154 320 aa7.35□□□□□ -1.23
BDP1YNL039W REF2P42073 533 aaPredicted RBP7.33□□□□□ -1.24
BDP1YNL039W NOP53Q12080 455 aaKnown RBP7.33□□□□□ -1.24
BDP1YNL039W GUA1P38625 525 aaKnown RBP7.33□□□□□ -1.24
BDP1YNL039W NUP42P49686 430 aaKnown RBP7.33□□□□□ -1.24
BDP1YNL039W DIT2P21595 489 aa7.32□□□□□ -1.24
BDP1YNL039W MAK21Q12176 1025 aaKnown RBP7.31□□□□□ -1.24
BDP1YNL039W VPS29P38759 282 aa7.28□□□□□ -1.24
BDP1YNL039W ATF2P53296 535 aa7.26□□□□□ -1.25
BDP1YNL039W HPC2Q01448 625 aa7.26□□□□□ -1.25
BDP1YNL039W COX6P00427 148 aa7.24□□□□□ -1.25
BDP1YNL039W MIF2P35201 549 aa7.23□□□□□ -1.25
BDP1YNL039W EDS1P38073 919 aa7.21□□□□□ -1.25
BDP1YNL039W YML020WQ03722 664 aa7.21□□□□□ -1.25
BDP1YNL039W TFB3Q03290 321 aa7.2□□□□□ -1.26
BDP1YNL039W SCY1P53009 804 aa7.2□□□□□ -1.26
BDP1YNL039W YMR1P47147 688 aaKnown RBP RIP-Chip data7.18□□□□□ -1.26not detected
BDP1YNL039W SSA1P10591 642 aaKnown RBP7.18□□□□□ -1.26
BDP1YNL039W NOP8Q08287 484 aaPredicted RBP7.18□□□□□ -1.26
BDP1YNL039W BRL1P38770 471 aa7.17□□□□□ -1.26
BDP1YNL039W GEF1P37020 779 aa7.16□□□□□ -1.26
BDP1YNL039W STS1P38637 319 aa7.16□□□□□ -1.26
BDP1YNL039W SLX8P40072 274 aa7.15□□□□□ -1.26
BDP1YNL039W SUB2Q07478 446 aaKnown RBP7.15□□□□□ -1.27
BDP1YNL039W AIM44Q99299 758 aa7.14□□□□□ -1.27
BDP1YNL039W SSA2P10592 639 aaKnown RBP7.13□□□□□ -1.27
BDP1YNL039W PKC1P24583 1151 aa7.12□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms