RNA–Protein interactions for RNA: YMR224C

MRE11, Transcript of Nuclease subunit of the MRX complex with Rad50p and Xrs2p, yeastyeast

Gene MRE11, Length 2,079 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRE11YMR224C DRS1P32892 752 aaKnown RBP12.68□□□□□ -0.38
MRE11YMR224C MTC1P47018 478 aaKnown RBP11.73□□□□□ -0.53
MRE11YMR224C BFR2Q06631 534 aaKnown RBP11.37□□□□□ -0.59
MRE11YMR224C TFA1P36100 482 aa11.35□□□□□ -0.59
MRE11YMR224C AVT3P36062 692 aa10.63□□□□□ -0.71
MRE11YMR224C RQC2Q12532 1038 aaKnown RBP10.55□□□□□ -0.72
MRE11YMR224C DIP2Q12220 943 aaPredicted RBP10.49□□□□□ -0.73
MRE11YMR224C TAF7Q05021 590 aa9.79□□□□□ -0.84
MRE11YMR224C DMA1P38823 416 aa9.68□□□□□ -0.86
MRE11YMR224C RSE1Q04693 1361 aaKnown RBP9.63□□□□□ -0.87
MRE11YMR224C LEO1P38439 464 aa9.33□□□□□ -0.92
MRE11YMR224C ISW2Q08773 1120 aa9.32□□□□□ -0.92
MRE11YMR224C PTP3P40048 928 aa9.29□□□□□ -0.92
MRE11YMR224C RPL17AP05740 184 aaKnown RBP9.23□□□□□ -0.93
MRE11YMR224C RPL17BP46990 184 aaKnown RBP9.23□□□□□ -0.93
MRE11YMR224C RPG1P38249 964 aaKnown RBP9.17□□□□□ -0.94
MRE11YMR224C RIM101P33400 625 aa9.06□□□□□ -0.96
MRE11YMR224C SSP1P38871 571 aa9.06□□□□□ -0.96
MRE11YMR224C REB1P21538 810 aa9.01□□□□□ -0.97
MRE11YMR224C SPT21P35209 758 aa8.98□□□□□ -0.97
MRE11YMR224C LEU3P08638 886 aa8.95□□□□□ -0.98
MRE11YMR224C PRI1P10363 409 aa8.91□□□□□ -0.98
MRE11YMR224C SAS10Q12136 610 aaPredicted RBP8.91□□□□□ -0.98
MRE11YMR224C OXP1P28273 1286 aa8.81□□□□□ -1
MRE11YMR224C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.8□□□□□ -1not detected
MRE11YMR224C YAH1Q12184 172 aaKnown RBP8.76□□□□□ -1.01
MRE11YMR224C YLR271WQ06152 274 aa8.73□□□□□ -1.01
MRE11YMR224C YIL055CP40523 627 aaKnown RBP8.65□□□□□ -1.02
MRE11YMR224C MGA2P40578 1113 aa8.64□□□□□ -1.03
MRE11YMR224C RPN1P38764 993 aaKnown RBP8.63□□□□□ -1.03
MRE11YMR224C DMA2P53924 522 aa8.62□□□□□ -1.03
MRE11YMR224C AAD16Q02895 342 aa8.61□□□□□ -1.03
MRE11YMR224C FAP1P53971 965 aa8.55□□□□□ -1.04
MRE11YMR224C RSM7P47150 247 aa8.52□□□□□ -1.05
MRE11YMR224C CST9Q06032 482 aa8.5□□□□□ -1.05
MRE11YMR224C TSR3Q12094 313 aaKnown RBP8.5□□□□□ -1.05
MRE11YMR224C YKR023WP36119 530 aaKnown RBP8.49□□□□□ -1.05
MRE11YMR224C ABP1P15891 592 aaKnown RBP8.44□□□□□ -1.06
MRE11YMR224C RLF2Q12495 606 aa8.43□□□□□ -1.06
MRE11YMR224C CKB1P43639 278 aa8.4□□□□□ -1.06
MRE11YMR224C SPB4P25808 606 aaPredicted RBP8.39□□□□□ -1.07
MRE11YMR224C PSD2P53037 1138 aaKnown RBP8.39□□□□□ -1.07
MRE11YMR224C SET1P38827 1080 aaKnown RBP8.34□□□□□ -1.07
MRE11YMR224C YPR148CQ06523 435 aa8.34□□□□□ -1.07
MRE11YMR224C RAM2P29703 316 aa8.32□□□□□ -1.08
MRE11YMR224C VPS70P47161 811 aa8.31□□□□□ -1.08
MRE11YMR224C TFC8Q12308 588 aa8.31□□□□□ -1.08
MRE11YMR224C AI2P03876 854 aa8.31□□□□□ -1.08
MRE11YMR224C HOP09932 586 aa8.3□□□□□ -1.08
MRE11YMR224C IFH1P39520 1085 aa8.27□□□□□ -1.09
MRE11YMR224C DSF2P38213 736 aa8.22□□□□□ -1.09
MRE11YMR224C DCD1P06773 312 aa8.21□□□□□ -1.1
MRE11YMR224C KIN1P13185 1064 aa8.18□□□□□ -1.1
MRE11YMR224C BBC1P47068 1157 aa8.18□□□□□ -1.1
MRE11YMR224C YNR021WP53723 404 aaKnown RBP8.17□□□□□ -1.1
MRE11YMR224C PBS2P08018 668 aa8.15□□□□□ -1.1
MRE11YMR224C MRPL32P25348 183 aa8.14□□□□□ -1.11
MRE11YMR224C RCR1P38212 213 aa8.13□□□□□ -1.11
MRE11YMR224C HGH1P48362 394 aaKnown RBP8.12□□□□□ -1.11
MRE11YMR224C BCH2P36122 765 aa8.11□□□□□ -1.11
MRE11YMR224C MAK11P20484 414 aaKnown RBP8.1□□□□□ -1.11
MRE11YMR224C MRM1P25270 412 aa8.1□□□□□ -1.11
MRE11YMR224C AIM7Q12156 149 aa8.09□□□□□ -1.11
MRE11YMR224C CDC27P38042 758 aa8.07□□□□□ -1.12
MRE11YMR224C GLC3P32775 704 aa8.07□□□□□ -1.12
MRE11YMR224C RTG3P38165 486 aa8.06□□□□□ -1.12
MRE11YMR224C MAM3Q12296 706 aa8.03□□□□□ -1.12
MRE11YMR224C EPS1P40557 701 aa8.02□□□□□ -1.12
MRE11YMR224C GUA1P38625 525 aaKnown RBP8.01□□□□□ -1.13
MRE11YMR224C IES2P40154 320 aa8□□□□□ -1.13
MRE11YMR224C NUP42P49686 430 aaKnown RBP7.99□□□□□ -1.13
MRE11YMR224C DIT2P21595 489 aa7.99□□□□□ -1.13
MRE11YMR224C COQ8P27697 501 aa7.98□□□□□ -1.13
MRE11YMR224C REF2P42073 533 aaPredicted RBP7.97□□□□□ -1.13
MRE11YMR224C NOP53Q12080 455 aaKnown RBP7.96□□□□□ -1.14
MRE11YMR224C MAK21Q12176 1025 aaKnown RBP7.96□□□□□ -1.14
MRE11YMR224C BDF1P35817 686 aa7.95□□□□□ -1.14
MRE11YMR224C PRY3P47033 881 aa7.95□□□□□ -1.14
MRE11YMR224C HPC2Q01448 625 aa7.93□□□□□ -1.14
MRE11YMR224C YML020WQ03722 664 aa7.93□□□□□ -1.14
MRE11YMR224C VPS29P38759 282 aa7.91□□□□□ -1.14
MRE11YMR224C ATF2P53296 535 aa7.9□□□□□ -1.15
MRE11YMR224C NOP8Q08287 484 aaPredicted RBP7.9□□□□□ -1.15
MRE11YMR224C COX6P00427 148 aa7.87□□□□□ -1.15
MRE11YMR224C TFB3Q03290 321 aa7.87□□□□□ -1.15
MRE11YMR224C AIM44Q99299 758 aa7.87□□□□□ -1.15
MRE11YMR224C SSA1P10591 642 aaKnown RBP7.85□□□□□ -1.15
MRE11YMR224C SLX8P40072 274 aa7.85□□□□□ -1.15
MRE11YMR224C GEF1P37020 779 aa7.84□□□□□ -1.15
MRE11YMR224C MIF2P35201 549 aa7.83□□□□□ -1.16
MRE11YMR224C EDS1P38073 919 aa7.83□□□□□ -1.16
MRE11YMR224C SUB2Q07478 446 aaKnown RBP7.83□□□□□ -1.16
MRE11YMR224C BRL1P38770 471 aa7.8□□□□□ -1.16
MRE11YMR224C PKC1P24583 1151 aa7.78□□□□□ -1.16
MRE11YMR224C YMR1P47147 688 aaKnown RBP RIP-Chip data7.77□□□□□ -1.17not detected
MRE11YMR224C SCY1P53009 804 aa7.77□□□□□ -1.17
MRE11YMR224C STS1P38637 319 aa7.76□□□□□ -1.17
MRE11YMR224C ORC1P54784 914 aaPredicted RBP7.75□□□□□ -1.17
MRE11YMR224C SSA2P10592 639 aaKnown RBP7.75□□□□□ -1.17
MRE11YMR224C BIM1P40013 344 aa7.74□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms