RNA–Protein interactions for RNA: YLR351C

NIT3, Transcript of Nit protein, yeastyeast

Gene NIT3, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIT3YLR351C DRS1P32892 752 aaKnown RBP13.97□□□□□ -0.17
NIT3YLR351C MTC1P47018 478 aaKnown RBP13.83□□□□□ -0.2
NIT3YLR351C BFR2Q06631 534 aaKnown RBP12.11□□□□□ -0.47
NIT3YLR351C DIP2Q12220 943 aaPredicted RBP11.88□□□□□ -0.51
NIT3YLR351C AVT3P36062 692 aa11.73□□□□□ -0.53
NIT3YLR351C TFA1P36100 482 aa11.47□□□□□ -0.57
NIT3YLR351C FAP1P53971 965 aa11.26□□□□□ -0.61
NIT3YLR351C ISW2Q08773 1120 aa11.26□□□□□ -0.61
NIT3YLR351C RSE1Q04693 1361 aaKnown RBP11.19□□□□□ -0.62
NIT3YLR351C RPG1P38249 964 aaKnown RBP11.08□□□□□ -0.64
NIT3YLR351C PRI1P10363 409 aa11.06□□□□□ -0.64
NIT3YLR351C AAD16Q02895 342 aa10.88□□□□□ -0.67
NIT3YLR351C RPL17AP05740 184 aaKnown RBP10.75□□□□□ -0.69
NIT3YLR351C RPL17BP46990 184 aaKnown RBP10.75□□□□□ -0.69
NIT3YLR351C REB1P21538 810 aa10.62□□□□□ -0.71
NIT3YLR351C PRY3P47033 881 aa10.52□□□□□ -0.73
NIT3YLR351C TSR3Q12094 313 aaKnown RBP10.5□□□□□ -0.73
NIT3YLR351C SPT21P35209 758 aa10.35□□□□□ -0.75
NIT3YLR351C RIM101P33400 625 aa10.25□□□□□ -0.77
NIT3YLR351C MRPL32P25348 183 aa10.13□□□□□ -0.79
NIT3YLR351C YKR023WP36119 530 aaKnown RBP10.01□□□□□ -0.81
NIT3YLR351C HAA1Q12753 694 aaKnown RBP9.97□□□□□ -0.81
NIT3YLR351C OXP1P28273 1286 aa9.92□□□□□ -0.82
NIT3YLR351C YCK3P39962 524 aa9.92□□□□□ -0.82
NIT3YLR351C PTP3P40048 928 aa9.92□□□□□ -0.82
NIT3YLR351C RQC2Q12532 1038 aaKnown RBP9.87□□□□□ -0.83
NIT3YLR351C SSP1P38871 571 aa9.83□□□□□ -0.84
NIT3YLR351C YIL055CP40523 627 aaKnown RBP9.82□□□□□ -0.84
NIT3YLR351C TFC8Q12308 588 aa9.81□□□□□ -0.84
NIT3YLR351C HOP09932 586 aa9.79□□□□□ -0.84
NIT3YLR351C YAH1Q12184 172 aaKnown RBP9.77□□□□□ -0.85
NIT3YLR351C CDC27P38042 758 aa9.76□□□□□ -0.85
NIT3YLR351C DCD1P06773 312 aa9.7□□□□□ -0.86
NIT3YLR351C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.7□□□□□ -0.86not detected
NIT3YLR351C YLR271WQ06152 274 aa9.67□□□□□ -0.86
NIT3YLR351C RSM7P47150 247 aa9.66□□□□□ -0.86
NIT3YLR351C BCH2P36122 765 aa9.53□□□□□ -0.88
NIT3YLR351C MGA2P40578 1113 aa9.5□□□□□ -0.89
NIT3YLR351C AI2P03876 854 aa9.47□□□□□ -0.89
NIT3YLR351C DMA1P38823 416 aa9.46□□□□□ -0.9
NIT3YLR351C YGL015CP33199 130 aa9.43□□□□□ -0.9
NIT3YLR351C BBC1P47068 1157 aa9.43□□□□□ -0.9
NIT3YLR351C PSD2P53037 1138 aaKnown RBP9.41□□□□□ -0.9
NIT3YLR351C UBP10P53874 792 aaPredicted RBP9.39□□□□□ -0.91
NIT3YLR351C EPS1P40557 701 aa9.37□□□□□ -0.91
NIT3YLR351C SCY1P53009 804 aa9.36□□□□□ -0.91
NIT3YLR351C CST9Q06032 482 aa9.36□□□□□ -0.91
NIT3YLR351C MAP2P38174 421 aaKnown RBP9.34□□□□□ -0.91
NIT3YLR351C BDF1P35817 686 aa9.3□□□□□ -0.92
NIT3YLR351C SLX5P32828 619 aaKnown RBP9.19□□□□□ -0.94
NIT3YLR351C MRM1P25270 412 aa9.17□□□□□ -0.94
NIT3YLR351C RTG3P38165 486 aa9.09□□□□□ -0.95
NIT3YLR351C RAM2P29703 316 aa9.04□□□□□ -0.96
NIT3YLR351C RCR1P38212 213 aa9.03□□□□□ -0.96
NIT3YLR351C TIF4632P39936 914 aaKnown RBP9.02□□□□□ -0.97
NIT3YLR351C VPS29P38759 282 aa8.96□□□□□ -0.98
NIT3YLR351C TGL3P40308 642 aa8.96□□□□□ -0.98
NIT3YLR351C SAS10Q12136 610 aaPredicted RBP8.96□□□□□ -0.98
NIT3YLR351C MAK11P20484 414 aaKnown RBP8.92□□□□□ -0.98
NIT3YLR351C YMR1P47147 688 aaKnown RBP RIP-Chip data8.91□□□□□ -0.98not detected
NIT3YLR351C SET1P38827 1080 aaKnown RBP8.89□□□□□ -0.99
NIT3YLR351C NSR1P27476 414 aaKnown RBP RIP-Chip data8.87□□□□□ -0.99 RIP-Chip
NIT3YLR351C DBP1P24784 617 aaKnown RBP8.83□□□□□ -1
NIT3YLR351C YAP5P40574 245 aa8.83□□□□□ -1
NIT3YLR351C YOR238WQ08634 303 aa8.83□□□□□ -1
NIT3YLR351C STS1P38637 319 aa8.82□□□□□ -1
NIT3YLR351C IFH1P39520 1085 aa8.81□□□□□ -1
NIT3YLR351C COQ8P27697 501 aa8.79□□□□□ -1
NIT3YLR351C YFR006WP43590 535 aa8.78□□□□□ -1
NIT3YLR351C NOP53Q12080 455 aaKnown RBP8.77□□□□□ -1.01
NIT3YLR351C YPR148CQ06523 435 aa8.76□□□□□ -1.01
NIT3YLR351C MIF2P35201 549 aa8.74□□□□□ -1.01
NIT3YLR351C CKB1P43639 278 aa8.72□□□□□ -1.01
NIT3YLR351C VPS70P47161 811 aa8.72□□□□□ -1.01
NIT3YLR351C PIB1Q06651 286 aa8.7□□□□□ -1.02
NIT3YLR351C MST1P07236 462 aa8.69□□□□□ -1.02
NIT3YLR351C LEU3P08638 886 aa8.69□□□□□ -1.02
NIT3YLR351C EDS1P38073 919 aa8.69□□□□□ -1.02
NIT3YLR351C LEO1P38439 464 aa8.66□□□□□ -1.02
NIT3YLR351C VMA1P17255 1071 aaKnown RBP8.65□□□□□ -1.02
NIT3YLR351C PTC3P34221 468 aaKnown RBP8.64□□□□□ -1.03
NIT3YLR351C SPB4P25808 606 aaPredicted RBP8.62□□□□□ -1.03
NIT3YLR351C GTT3P39996 337 aa8.59□□□□□ -1.03
NIT3YLR351C SAM3Q08986 587 aa8.58□□□□□ -1.04
NIT3YLR351C GRE2Q12068 342 aaKnown RBP8.55□□□□□ -1.04
NIT3YLR351C PBS2P08018 668 aa8.53□□□□□ -1.04
NIT3YLR351C REF2P42073 533 aaPredicted RBP8.53□□□□□ -1.04
NIT3YLR351C ATH1P48016 1211 aa8.53□□□□□ -1.04
NIT3YLR351C GUT1P32190 709 aa8.52□□□□□ -1.05
NIT3YLR351C DSF2P38213 736 aa8.51□□□□□ -1.05
NIT3YLR351C GYP5Q12344 894 aa8.51□□□□□ -1.05
NIT3YLR351C RPN1P38764 993 aaKnown RBP8.47□□□□□ -1.05
NIT3YLR351C ABP1P15891 592 aaKnown RBP8.46□□□□□ -1.06
NIT3YLR351C YOL036WQ08206 761 aa8.46□□□□□ -1.06
NIT3YLR351C MAK21Q12176 1025 aaKnown RBP8.45□□□□□ -1.06
NIT3YLR351C MSB4Q12317 492 aa8.44□□□□□ -1.06
NIT3YLR351C SET4P42948 560 aa8.43□□□□□ -1.06
NIT3YLR351C MAM3Q12296 706 aa8.42□□□□□ -1.06
NIT3YLR351C COX6P00427 148 aa8.41□□□□□ -1.06
NIT3YLR351C DCW1P36091 449 aa8.41□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms