RNA–Protein interactions for RNA: YLR330W

CHS5, Transcript of Component of the exomer complex, yeastyeast

Gene CHS5, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHS5YLR330W DRS1P32892 752 aaKnown RBP13.52□□□□□ -0.25
CHS5YLR330W TFA1P36100 482 aa12.57□□□□□ -0.4
CHS5YLR330W BFR2Q06631 534 aaKnown RBP12.3□□□□□ -0.44
CHS5YLR330W MTC1P47018 478 aaKnown RBP12.06□□□□□ -0.48
CHS5YLR330W RQC2Q12532 1038 aaKnown RBP12.03□□□□□ -0.48
CHS5YLR330W TAF7Q05021 590 aa11.6□□□□□ -0.55
CHS5YLR330W AVT3P36062 692 aa11.31□□□□□ -0.6
CHS5YLR330W DIP2Q12220 943 aaPredicted RBP11.04□□□□□ -0.64
CHS5YLR330W DMA1P38823 416 aa10.89□□□□□ -0.67
CHS5YLR330W LEO1P38439 464 aa10.68□□□□□ -0.7
CHS5YLR330W LEU3P08638 886 aa10.07□□□□□ -0.8
CHS5YLR330W PTP3P40048 928 aa10.06□□□□□ -0.8
CHS5YLR330W RSE1Q04693 1361 aaKnown RBP10.01□□□□□ -0.81
CHS5YLR330W SAS10Q12136 610 aaPredicted RBP9.89□□□□□ -0.83
CHS5YLR330W DMA2P53924 522 aa9.84□□□□□ -0.83
CHS5YLR330W ABP1P15891 592 aaKnown RBP9.74□□□□□ -0.85
CHS5YLR330W SSP1P38871 571 aa9.7□□□□□ -0.86
CHS5YLR330W RPN1P38764 993 aaKnown RBP9.66□□□□□ -0.86
CHS5YLR330W RLF2Q12495 606 aa9.65□□□□□ -0.86
CHS5YLR330W IFH1P39520 1085 aa9.63□□□□□ -0.87
CHS5YLR330W RPL17AP05740 184 aaKnown RBP9.56□□□□□ -0.88
CHS5YLR330W RPL17BP46990 184 aaKnown RBP9.56□□□□□ -0.88
CHS5YLR330W RIM101P33400 625 aa9.53□□□□□ -0.88
CHS5YLR330W AIM44Q99299 758 aa9.51□□□□□ -0.89
CHS5YLR330W NAP1P25293 417 aaKnown RBP9.48□□□□□ -0.89
CHS5YLR330W ISW2Q08773 1120 aa9.45□□□□□ -0.9
CHS5YLR330W IOC4Q04213 475 aa9.41□□□□□ -0.9
CHS5YLR330W CKB1P43639 278 aa9.41□□□□□ -0.9
CHS5YLR330W SPT21P35209 758 aa9.38□□□□□ -0.91
CHS5YLR330W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.37□□□□□ -0.91not detected
CHS5YLR330W ORC1P54784 914 aaPredicted RBP9.36□□□□□ -0.91
CHS5YLR330W RPG1P38249 964 aaKnown RBP9.32□□□□□ -0.92
CHS5YLR330W OXP1P28273 1286 aa9.31□□□□□ -0.92
CHS5YLR330W YAH1Q12184 172 aaKnown RBP9.3□□□□□ -0.92
CHS5YLR330W YLR271WQ06152 274 aa9.28□□□□□ -0.92
CHS5YLR330W REB1P21538 810 aa9.27□□□□□ -0.92
CHS5YLR330W SPB4P25808 606 aaPredicted RBP9.24□□□□□ -0.93
CHS5YLR330W MGA2P40578 1113 aa9.21□□□□□ -0.93
CHS5YLR330W YML020WQ03722 664 aa9.21□□□□□ -0.94
CHS5YLR330W NOP8Q08287 484 aaPredicted RBP9.16□□□□□ -0.94
CHS5YLR330W KIN1P13185 1064 aa9.1□□□□□ -0.95
CHS5YLR330W YPR148CQ06523 435 aa9.09□□□□□ -0.95
CHS5YLR330W YIL055CP40523 627 aaKnown RBP9.07□□□□□ -0.96
CHS5YLR330W VPS70P47161 811 aa9.07□□□□□ -0.96
CHS5YLR330W CST9Q06032 482 aa9.07□□□□□ -0.96
CHS5YLR330W HGH1P48362 394 aaKnown RBP9.04□□□□□ -0.96
CHS5YLR330W SLX8P40072 274 aa9.02□□□□□ -0.97
CHS5YLR330W SET1P38827 1080 aaKnown RBP9.02□□□□□ -0.97
CHS5YLR330W DSF2P38213 736 aa9□□□□□ -0.97
CHS5YLR330W YNR021WP53723 404 aaKnown RBP9□□□□□ -0.97
CHS5YLR330W RSM7P47150 247 aa8.97□□□□□ -0.97
CHS5YLR330W GEF1P37020 779 aa8.95□□□□□ -0.98
CHS5YLR330W URN1Q06525 465 aaKnown RBP8.95□□□□□ -0.98
CHS5YLR330W SSA1P10591 642 aaKnown RBP8.94□□□□□ -0.98
CHS5YLR330W RAM2P29703 316 aa8.93□□□□□ -0.98
CHS5YLR330W GLC3P32775 704 aa8.91□□□□□ -0.98
CHS5YLR330W NOP7P53261 605 aaKnown RBP8.91□□□□□ -0.98
CHS5YLR330W AIM7Q12156 149 aa8.91□□□□□ -0.98
CHS5YLR330W PRI1P10363 409 aa8.9□□□□□ -0.98
CHS5YLR330W GUA1P38625 525 aaKnown RBP8.9□□□□□ -0.99
CHS5YLR330W PBS2P08018 668 aa8.89□□□□□ -0.99
CHS5YLR330W PSD2P53037 1138 aaKnown RBP8.88□□□□□ -0.99
CHS5YLR330W SUB2Q07478 446 aaKnown RBP8.88□□□□□ -0.99
CHS5YLR330W MAM3Q12296 706 aa8.87□□□□□ -0.99
CHS5YLR330W MRX12P47084 519 aa8.85□□□□□ -0.99
CHS5YLR330W TOP1P04786 769 aa8.83□□□□□ -1
CHS5YLR330W HPC2Q01448 625 aa8.8□□□□□ -1
CHS5YLR330W SNU71P53207 620 aaKnown RBP8.78□□□□□ -1
CHS5YLR330W YKR023WP36119 530 aaKnown RBP8.76□□□□□ -1.01
CHS5YLR330W TFB3Q03290 321 aa8.76□□□□□ -1.01
CHS5YLR330W DIT2P21595 489 aa8.75□□□□□ -1.01
CHS5YLR330W IES2P40154 320 aa8.75□□□□□ -1.01
CHS5YLR330W PAM1P37304 830 aaKnown RBP8.74□□□□□ -1.01
CHS5YLR330W NUP42P49686 430 aaKnown RBP8.74□□□□□ -1.01
CHS5YLR330W MET10P39692 1035 aa8.72□□□□□ -1.01
CHS5YLR330W MAK21Q12176 1025 aaKnown RBP8.72□□□□□ -1.01
CHS5YLR330W AI2P03876 854 aa8.71□□□□□ -1.01
CHS5YLR330W SLD2P34252 453 aa8.71□□□□□ -1.02
CHS5YLR330W BRL1P38770 471 aa8.7□□□□□ -1.02
CHS5YLR330W YRB30P53107 440 aaPredicted RBP8.67□□□□□ -1.02
CHS5YLR330W PKC1P24583 1151 aa8.66□□□□□ -1.02
CHS5YLR330W RCR1P38212 213 aa8.65□□□□□ -1.02
CHS5YLR330W YTA7P40340 1379 aa8.65□□□□□ -1.03
CHS5YLR330W SSA4P22202 642 aaKnown RBP8.64□□□□□ -1.03
CHS5YLR330W RRN6P32786 894 aa8.64□□□□□ -1.03
CHS5YLR330W BRN1P38170 754 aa8.63□□□□□ -1.03
CHS5YLR330W ATF2P53296 535 aa8.63□□□□□ -1.03
CHS5YLR330W GLN1P32288 370 aaKnown RBP8.63□□□□□ -1.03
CHS5YLR330W BIM1P40013 344 aa8.63□□□□□ -1.03
CHS5YLR330W MAK11P20484 414 aaKnown RBP8.61□□□□□ -1.03
CHS5YLR330W REF2P42073 533 aaPredicted RBP8.6□□□□□ -1.03
CHS5YLR330W SEN54Q02825 467 aaPredicted RBP8.6□□□□□ -1.03
CHS5YLR330W HEM3P28789 327 aa8.59□□□□□ -1.03
CHS5YLR330W ATG32P40458 529 aa8.59□□□□□ -1.03
CHS5YLR330W SPC42P36094 363 aa8.58□□□□□ -1.04
CHS5YLR330W SSF1P38789 453 aaPredicted RBP8.58□□□□□ -1.04
CHS5YLR330W FAR11P53917 953 aa8.58□□□□□ -1.04
CHS5YLR330W YJL007CP47080 104 aa8.57□□□□□ -1.04
CHS5YLR330W DOS2P54858 310 aa8.57□□□□□ -1.04
CHS5YLR330W ATG36P46983 293 aa8.56□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms