RNA–Protein interactions for RNA: YLR276C

DBP9, Transcript of DEAD-box protein required for 27S rRNA processing, yeastyeast

Gene DBP9, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DBP9YLR276C DRS1P32892 752 aaKnown RBP12.45□□□□□ -0.42
DBP9YLR276C MTC1P47018 478 aaKnown RBP11.51□□□□□ -0.57
DBP9YLR276C TFA1P36100 482 aa11.21□□□□□ -0.62
DBP9YLR276C BFR2Q06631 534 aaKnown RBP11.16□□□□□ -0.62
DBP9YLR276C AVT3P36062 692 aa10.48□□□□□ -0.73
DBP9YLR276C RQC2Q12532 1038 aaKnown RBP10.32□□□□□ -0.76
DBP9YLR276C DIP2Q12220 943 aaPredicted RBP10.31□□□□□ -0.76
DBP9YLR276C FAP1P53971 965 aa9.7□□□□□ -0.86
DBP9YLR276C TAF7Q05021 590 aa9.69□□□□□ -0.86
DBP9YLR276C DMA1P38823 416 aa9.56□□□□□ -0.88
DBP9YLR276C RSE1Q04693 1361 aaKnown RBP9.44□□□□□ -0.9
DBP9YLR276C LEO1P38439 464 aa9.21□□□□□ -0.94
DBP9YLR276C PRY3P47033 881 aa9.15□□□□□ -0.94
DBP9YLR276C PTP3P40048 928 aa9.13□□□□□ -0.95
DBP9YLR276C ISW2Q08773 1120 aa9.09□□□□□ -0.95
DBP9YLR276C RPL17AP05740 184 aaKnown RBP9.03□□□□□ -0.96
DBP9YLR276C RPL17BP46990 184 aaKnown RBP9.03□□□□□ -0.96
DBP9YLR276C RPG1P38249 964 aaKnown RBP8.98□□□□□ -0.97
DBP9YLR276C RIM101P33400 625 aa8.92□□□□□ -0.98
DBP9YLR276C SSP1P38871 571 aa8.89□□□□□ -0.99
DBP9YLR276C SPT21P35209 758 aa8.87□□□□□ -0.99
DBP9YLR276C LEU3P08638 886 aa8.84□□□□□ -0.99
DBP9YLR276C AAD16Q02895 342 aa8.83□□□□□ -1
DBP9YLR276C SAS10Q12136 610 aaPredicted RBP8.82□□□□□ -1
DBP9YLR276C REB1P21538 810 aa8.8□□□□□ -1
DBP9YLR276C PRI1P10363 409 aa8.78□□□□□ -1
DBP9YLR276C OXP1P28273 1286 aa8.7□□□□□ -1.02
DBP9YLR276C YCK3P39962 524 aa8.63□□□□□ -1.03
DBP9YLR276C HAA1Q12753 694 aaKnown RBP8.61□□□□□ -1.03
DBP9YLR276C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
DBP9YLR276C YLR271WQ06152 274 aa8.6□□□□□ -1.03
DBP9YLR276C YAH1Q12184 172 aaKnown RBP8.59□□□□□ -1.03
DBP9YLR276C DMA2P53924 522 aa8.52□□□□□ -1.05
DBP9YLR276C MGA2P40578 1113 aa8.5□□□□□ -1.05
DBP9YLR276C RPN1P38764 993 aaKnown RBP8.48□□□□□ -1.05
DBP9YLR276C YIL055CP40523 627 aaKnown RBP8.45□□□□□ -1.06
DBP9YLR276C ABP1P15891 592 aaKnown RBP8.43□□□□□ -1.06
DBP9YLR276C CST9Q06032 482 aa8.39□□□□□ -1.07
DBP9YLR276C RSM7P47150 247 aa8.37□□□□□ -1.07
DBP9YLR276C YKR023WP36119 530 aaKnown RBP8.36□□□□□ -1.07
DBP9YLR276C TSR3Q12094 313 aaKnown RBP8.32□□□□□ -1.08
DBP9YLR276C RLF2Q12495 606 aa8.32□□□□□ -1.08
DBP9YLR276C CKB1P43639 278 aa8.28□□□□□ -1.08
DBP9YLR276C PSD2P53037 1138 aaKnown RBP8.28□□□□□ -1.08
DBP9YLR276C SPB4P25808 606 aaPredicted RBP8.23□□□□□ -1.09
DBP9YLR276C YPR148CQ06523 435 aa8.23□□□□□ -1.09
DBP9YLR276C NOP2P40991 618 aaKnown RBP8.22□□□□□ -1.09
DBP9YLR276C RAM2P29703 316 aa8.21□□□□□ -1.1
DBP9YLR276C SET1P38827 1080 aaKnown RBP8.2□□□□□ -1.1
DBP9YLR276C VPS70P47161 811 aa8.17□□□□□ -1.1
DBP9YLR276C TFC8Q12308 588 aa8.17□□□□□ -1.1
DBP9YLR276C AI2P03876 854 aa8.16□□□□□ -1.1
DBP9YLR276C HOP09932 586 aa8.15□□□□□ -1.11
DBP9YLR276C DSF2P38213 736 aa8.11□□□□□ -1.11
DBP9YLR276C IFH1P39520 1085 aa8.1□□□□□ -1.11
DBP9YLR276C DCD1P06773 312 aa8.08□□□□□ -1.12
DBP9YLR276C KIN1P13185 1064 aa8.07□□□□□ -1.12
DBP9YLR276C RCR1P38212 213 aa8.05□□□□□ -1.12
DBP9YLR276C YNR021WP53723 404 aaKnown RBP8.05□□□□□ -1.12
DBP9YLR276C PBS2P08018 668 aa8.02□□□□□ -1.13
DBP9YLR276C NSR1P27476 414 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13not detected
DBP9YLR276C BBC1P47068 1157 aa7.99□□□□□ -1.13
DBP9YLR276C BCH2P36122 765 aa7.98□□□□□ -1.13
DBP9YLR276C AIM7Q12156 149 aa7.97□□□□□ -1.13
DBP9YLR276C MAK11P20484 414 aaKnown RBP7.96□□□□□ -1.14
DBP9YLR276C MRM1P25270 412 aa7.95□□□□□ -1.14
DBP9YLR276C GLC3P32775 704 aa7.95□□□□□ -1.14
DBP9YLR276C CDC27P38042 758 aa7.95□□□□□ -1.14
DBP9YLR276C MRPL32P25348 183 aa7.94□□□□□ -1.14
DBP9YLR276C EBP2P36049 427 aaKnown RBP7.94□□□□□ -1.14
DBP9YLR276C SPA2P23201 1466 aaKnown RBP7.92□□□□□ -1.14
DBP9YLR276C GUA1P38625 525 aaKnown RBP7.92□□□□□ -1.14
DBP9YLR276C HGH1P48362 394 aaKnown RBP7.92□□□□□ -1.14
DBP9YLR276C NUP42P49686 430 aaKnown RBP7.9□□□□□ -1.14
DBP9YLR276C RTG3P38165 486 aa7.89□□□□□ -1.15
DBP9YLR276C MAM3Q12296 706 aa7.89□□□□□ -1.15
DBP9YLR276C DIT2P21595 489 aa7.89□□□□□ -1.15
DBP9YLR276C EPS1P40557 701 aa7.88□□□□□ -1.15
DBP9YLR276C CAB3P36076 571 aa7.87□□□□□ -1.15
DBP9YLR276C IES2P40154 320 aa7.87□□□□□ -1.15
DBP9YLR276C SKI3P17883 1432 aaKnown RBP7.85□□□□□ -1.15
DBP9YLR276C YML020WQ03722 664 aa7.85□□□□□ -1.15
DBP9YLR276C COQ8P27697 501 aa7.84□□□□□ -1.15
DBP9YLR276C YGL015CP33199 130 aa7.84□□□□□ -1.15
DBP9YLR276C NOP8Q08287 484 aaPredicted RBP7.84□□□□□ -1.15
DBP9YLR276C REF2P42073 533 aaPredicted RBP7.82□□□□□ -1.16
DBP9YLR276C BDF1P35817 686 aa7.82□□□□□ -1.16
DBP9YLR276C HPC2Q01448 625 aa7.82□□□□□ -1.16
DBP9YLR276C NOP53Q12080 455 aaKnown RBP7.82□□□□□ -1.16
DBP9YLR276C MAK21Q12176 1025 aaKnown RBP7.81□□□□□ -1.16
DBP9YLR276C VPS29P38759 282 aa7.79□□□□□ -1.16
DBP9YLR276C URN1Q06525 465 aaKnown RBP7.79□□□□□ -1.16
DBP9YLR276C TFB3Q03290 321 aa7.76□□□□□ -1.17
DBP9YLR276C ORC1P54784 914 aaPredicted RBP7.76□□□□□ -1.17
DBP9YLR276C SSA1P10591 642 aaKnown RBP7.75□□□□□ -1.17
DBP9YLR276C SSN2P38931 1420 aa7.74□□□□□ -1.17
DBP9YLR276C COX6P00427 148 aa7.74□□□□□ -1.17
DBP9YLR276C GEF1P37020 779 aa7.74□□□□□ -1.17
DBP9YLR276C SLX8P40072 274 aa7.74□□□□□ -1.17
DBP9YLR276C SUB2Q07478 446 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms