RNA–Protein interactions for RNA: YLR066W

SPC3, Transcript of Subunit of signal peptidase complex, yeastyeast

Gene SPC3, Length 555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC3YLR066W MTC1P47018 478 aaKnown RBP13.95□□□□□ -0.18
SPC3YLR066W DRS1P32892 752 aaKnown RBP13.33□□□□□ -0.28
SPC3YLR066W FAP1P53971 965 aa12.91□□□□□ -0.34
SPC3YLR066W PRY3P47033 881 aa12.18□□□□□ -0.46
SPC3YLR066W PRI1P10363 409 aa11.77□□□□□ -0.53
SPC3YLR066W AAD16Q02895 342 aa11.75□□□□□ -0.53
SPC3YLR066W BFR2Q06631 534 aaKnown RBP11.71□□□□□ -0.53
SPC3YLR066W YCK3P39962 524 aa11.61□□□□□ -0.55
SPC3YLR066W ISW2Q08773 1120 aa11.51□□□□□ -0.57
SPC3YLR066W RPG1P38249 964 aaKnown RBP11.42□□□□□ -0.58
SPC3YLR066W HAA1Q12753 694 aaKnown RBP11.4□□□□□ -0.58
SPC3YLR066W DIP2Q12220 943 aaPredicted RBP11.38□□□□□ -0.59
SPC3YLR066W TFA1P36100 482 aa11.28□□□□□ -0.6
SPC3YLR066W AVT3P36062 692 aa11.2□□□□□ -0.62
SPC3YLR066W TSR3Q12094 313 aaKnown RBP11.13□□□□□ -0.63
SPC3YLR066W RSE1Q04693 1361 aaKnown RBP11□□□□□ -0.65
SPC3YLR066W RPL17AP05740 184 aaKnown RBP10.67□□□□□ -0.7
SPC3YLR066W RPL17BP46990 184 aaKnown RBP10.67□□□□□ -0.7
SPC3YLR066W MRPL32P25348 183 aa10.63□□□□□ -0.71
SPC3YLR066W REB1P21538 810 aa10.59□□□□□ -0.71
SPC3YLR066W YGL015CP33199 130 aa10.42□□□□□ -0.74
SPC3YLR066W SPT21P35209 758 aa10.27□□□□□ -0.77
SPC3YLR066W CDC27P38042 758 aa10.19□□□□□ -0.78
SPC3YLR066W YKR023WP36119 530 aaKnown RBP10.15□□□□□ -0.78
SPC3YLR066W RQC2Q12532 1038 aaKnown RBP10.02□□□□□ -0.81
SPC3YLR066W BUD31P25337 157 aaPredicted RBP9.96□□□□□ -0.82
SPC3YLR066W TFC8Q12308 588 aa9.93□□□□□ -0.82
SPC3YLR066W HOP09932 586 aa9.92□□□□□ -0.82
SPC3YLR066W DCD1P06773 312 aa9.9□□□□□ -0.82
SPC3YLR066W RIM101P33400 625 aa9.87□□□□□ -0.83
SPC3YLR066W MAP2P38174 421 aaKnown RBP9.85□□□□□ -0.83
SPC3YLR066W UBP10P53874 792 aaPredicted RBP9.85□□□□□ -0.83
SPC3YLR066W SCY1P53009 804 aa9.63□□□□□ -0.87
SPC3YLR066W BCH2P36122 765 aa9.59□□□□□ -0.87
SPC3YLR066W OXP1P28273 1286 aa9.56□□□□□ -0.88
SPC3YLR066W PTP3P40048 928 aa9.54□□□□□ -0.88
SPC3YLR066W SLX5P32828 619 aaKnown RBP9.49□□□□□ -0.89
SPC3YLR066W SSP1P38871 571 aa9.43□□□□□ -0.9
SPC3YLR066W TIF4632P39936 914 aaKnown RBP9.39□□□□□ -0.91
SPC3YLR066W DMA1P38823 416 aa9.37□□□□□ -0.91
SPC3YLR066W TGL3P40308 642 aa9.37□□□□□ -0.91
SPC3YLR066W EPS1P40557 701 aa9.36□□□□□ -0.91
SPC3YLR066W SIS1P25294 352 aaKnown RBP9.33□□□□□ -0.92
SPC3YLR066W UBP9P39967 754 aa9.32□□□□□ -0.92
SPC3YLR066W BDF1P35817 686 aa9.31□□□□□ -0.92
SPC3YLR066W YIL055CP40523 627 aaKnown RBP9.31□□□□□ -0.92
SPC3YLR066W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.3□□□□□ -0.92not detected
SPC3YLR066W YAH1Q12184 172 aaKnown RBP9.27□□□□□ -0.93
SPC3YLR066W RSM7P47150 247 aa9.23□□□□□ -0.93
SPC3YLR066W YLR271WQ06152 274 aa9.2□□□□□ -0.94
SPC3YLR066W AI2P03876 854 aa9.16□□□□□ -0.94
SPC3YLR066W BBC1P47068 1157 aa9.12□□□□□ -0.95
SPC3YLR066W MGA2P40578 1113 aa9.09□□□□□ -0.95
SPC3YLR066W MST1P07236 462 aa9.02□□□□□ -0.97
SPC3YLR066W NSR1P27476 414 aaKnown RBP RIP-Chip data9□□□□□ -0.97not detected
SPC3YLR066W PSD2P53037 1138 aaKnown RBP8.99□□□□□ -0.97
SPC3YLR066W YOR238WQ08634 303 aa8.95□□□□□ -0.98
SPC3YLR066W CST9Q06032 482 aa8.92□□□□□ -0.98
SPC3YLR066W YAP5P40574 245 aa8.9□□□□□ -0.98
SPC3YLR066W YBL029C-AQ3E756 94 aa8.88□□□□□ -0.99
SPC3YLR066W MRM1P25270 412 aa8.83□□□□□ -1
SPC3YLR066W SAS10Q12136 610 aaPredicted RBP8.83□□□□□ -1
SPC3YLR066W VNX1P42839 908 aa8.77□□□□□ -1.01
SPC3YLR066W LEO1P38439 464 aa8.76□□□□□ -1.01
SPC3YLR066W PIB1Q06651 286 aa8.72□□□□□ -1.01
SPC3YLR066W WSC3Q12215 556 aa8.72□□□□□ -1.01
SPC3YLR066W LEU3P08638 886 aa8.7□□□□□ -1.02
SPC3YLR066W GTT3P39996 337 aa8.68□□□□□ -1.02
SPC3YLR066W TAF7Q05021 590 aa8.68□□□□□ -1.02
SPC3YLR066W RAM2P29703 316 aa8.66□□□□□ -1.02
SPC3YLR066W VPS29P38759 282 aa8.66□□□□□ -1.02
SPC3YLR066W SPP1Q03012 353 aa8.66□□□□□ -1.02
SPC3YLR066W RTG3P38165 486 aa8.61□□□□□ -1.03
SPC3YLR066W TIF11P38912 153 aaKnown RBP8.61□□□□□ -1.03
SPC3YLR066W RCR1P38212 213 aa8.6□□□□□ -1.03
SPC3YLR066W YMR1P47147 688 aaKnown RBP RIP-Chip data8.6□□□□□ -1.03not detected
SPC3YLR066W DBP1P24784 617 aaKnown RBP8.58□□□□□ -1.04
SPC3YLR066W STS1P38637 319 aa8.58□□□□□ -1.04
SPC3YLR066W SET1P38827 1080 aaKnown RBP8.57□□□□□ -1.04
SPC3YLR066W IFH1P39520 1085 aa8.57□□□□□ -1.04
SPC3YLR066W YFR006WP43590 535 aa8.57□□□□□ -1.04
SPC3YLR066W MAK11P20484 414 aaKnown RBP8.55□□□□□ -1.04
SPC3YLR066W YPR148CQ06523 435 aa8.54□□□□□ -1.04
SPC3YLR066W FKH1P40466 484 aa8.53□□□□□ -1.04
SPC3YLR066W AIR2Q12476 344 aaKnown RBP8.53□□□□□ -1.04
SPC3YLR066W CKB1P43639 278 aa8.51□□□□□ -1.05
SPC3YLR066W IOC2Q12072 812 aa8.51□□□□□ -1.05
SPC3YLR066W VMA1P17255 1071 aaKnown RBP8.5□□□□□ -1.05
SPC3YLR066W ULI1P43604 169 aa8.5□□□□□ -1.05
SPC3YLR066W YJL171CP46992 396 aa8.5□□□□□ -1.05
SPC3YLR066W YOL036WQ08206 761 aa8.5□□□□□ -1.05
SPC3YLR066W MSB4Q12317 492 aa8.49□□□□□ -1.05
SPC3YLR066W LDB19Q12502 818 aa8.48□□□□□ -1.05
SPC3YLR066W SET4P42948 560 aa8.47□□□□□ -1.05
SPC3YLR066W VPS70P47161 811 aa8.45□□□□□ -1.06
SPC3YLR066W SAM3Q08986 587 aa8.45□□□□□ -1.06
SPC3YLR066W NOP53Q12080 455 aaKnown RBP8.43□□□□□ -1.06
SPC3YLR066W RPN1P38764 993 aaKnown RBP8.42□□□□□ -1.06
SPC3YLR066W EAP1P36041 632 aaKnown RBP8.41□□□□□ -1.06
SPC3YLR066W TRP5P00931 707 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms