RNA–Protein interactions for RNA: YKR002W

PAP1, Transcript of Poly(A) polymerase, yeastyeast

Gene PAP1, Length 1,707 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAP1YKR002W DRS1P32892 752 aaKnown RBP14.55□□□□□ -0.08
PAP1YKR002W MTC1P47018 478 aaKnown RBP13.45□□□□□ -0.26
PAP1YKR002W TFA1P36100 482 aa13.05□□□□□ -0.32
PAP1YKR002W BFR2Q06631 534 aaKnown RBP13.03□□□□□ -0.32
PAP1YKR002W AVT3P36062 692 aa12.24□□□□□ -0.45
PAP1YKR002W DIP2Q12220 943 aaPredicted RBP12.04□□□□□ -0.48
PAP1YKR002W RQC2Q12532 1038 aaKnown RBP11.91□□□□□ -0.5
PAP1YKR002W TAF7Q05021 590 aa11.23□□□□□ -0.61
PAP1YKR002W DMA1P38823 416 aa11.17□□□□□ -0.62
PAP1YKR002W RSE1Q04693 1361 aaKnown RBP11.02□□□□□ -0.65
PAP1YKR002W PTP3P40048 928 aa10.69□□□□□ -0.7
PAP1YKR002W LEO1P38439 464 aa10.67□□□□□ -0.7
PAP1YKR002W ISW2Q08773 1120 aa10.6□□□□□ -0.71
PAP1YKR002W RPL17AP05740 184 aaKnown RBP10.58□□□□□ -0.72
PAP1YKR002W RPL17BP46990 184 aaKnown RBP10.58□□□□□ -0.72
PAP1YKR002W RPG1P38249 964 aaKnown RBP10.52□□□□□ -0.73
PAP1YKR002W RIM101P33400 625 aa10.42□□□□□ -0.74
PAP1YKR002W SSP1P38871 571 aa10.38□□□□□ -0.75
PAP1YKR002W SPT21P35209 758 aa10.37□□□□□ -0.75
PAP1YKR002W REB1P21538 810 aa10.27□□□□□ -0.76
PAP1YKR002W LEU3P08638 886 aa10.25□□□□□ -0.77
PAP1YKR002W SAS10Q12136 610 aaPredicted RBP10.25□□□□□ -0.77
PAP1YKR002W PRI1P10363 409 aa10.21□□□□□ -0.77
PAP1YKR002W OXP1P28273 1286 aa10.19□□□□□ -0.78
PAP1YKR002W YAH1Q12184 172 aaKnown RBP10.07□□□□□ -0.8
PAP1YKR002W YLR271WQ06152 274 aa10.06□□□□□ -0.8
PAP1YKR002W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.01□□□□□ -0.81 RIP-Chip
PAP1YKR002W DMA2P53924 522 aa9.96□□□□□ -0.82
PAP1YKR002W ABP1P15891 592 aaKnown RBP9.89□□□□□ -0.83
PAP1YKR002W MGA2P40578 1113 aa9.89□□□□□ -0.83
PAP1YKR002W YIL055CP40523 627 aaKnown RBP9.85□□□□□ -0.83
PAP1YKR002W RPN1P38764 993 aaKnown RBP9.85□□□□□ -0.83
PAP1YKR002W AAD16Q02895 342 aa9.84□□□□□ -0.83
PAP1YKR002W CST9Q06032 482 aa9.83□□□□□ -0.84
PAP1YKR002W YKR023WP36119 530 aaKnown RBP9.8□□□□□ -0.84
PAP1YKR002W TSR3Q12094 313 aaKnown RBP9.78□□□□□ -0.84
PAP1YKR002W RSM7P47150 247 aa9.77□□□□□ -0.85
PAP1YKR002W FAP1P53971 965 aa9.73□□□□□ -0.85
PAP1YKR002W PSD2P53037 1138 aaKnown RBP9.67□□□□□ -0.86
PAP1YKR002W RLF2Q12495 606 aa9.65□□□□□ -0.87
PAP1YKR002W RAM2P29703 316 aa9.6□□□□□ -0.87
PAP1YKR002W CKB1P43639 278 aa9.6□□□□□ -0.87
PAP1YKR002W YPR148CQ06523 435 aa9.59□□□□□ -0.87
PAP1YKR002W SPB4P25808 606 aaPredicted RBP9.58□□□□□ -0.88
PAP1YKR002W HOP09932 586 aa9.56□□□□□ -0.88
PAP1YKR002W SET1P38827 1080 aaKnown RBP9.56□□□□□ -0.88
PAP1YKR002W TFC8Q12308 588 aa9.56□□□□□ -0.88
PAP1YKR002W VPS70P47161 811 aa9.54□□□□□ -0.88
PAP1YKR002W AI2P03876 854 aa9.53□□□□□ -0.88
PAP1YKR002W DCD1P06773 312 aa9.51□□□□□ -0.89
PAP1YKR002W RCR1P38212 213 aa9.43□□□□□ -0.9
PAP1YKR002W DSF2P38213 736 aa9.43□□□□□ -0.9
PAP1YKR002W KIN1P13185 1064 aa9.4□□□□□ -0.9
PAP1YKR002W IFH1P39520 1085 aa9.37□□□□□ -0.91
PAP1YKR002W PBS2P08018 668 aa9.34□□□□□ -0.91
PAP1YKR002W YNR021WP53723 404 aaKnown RBP9.34□□□□□ -0.91
PAP1YKR002W BCH2P36122 765 aa9.34□□□□□ -0.92
PAP1YKR002W CDC27P38042 758 aa9.34□□□□□ -0.92
PAP1YKR002W MRM1P25270 412 aa9.31□□□□□ -0.92
PAP1YKR002W BBC1P47068 1157 aa9.3□□□□□ -0.92
PAP1YKR002W GLC3P32775 704 aa9.28□□□□□ -0.92
PAP1YKR002W MRPL32P25348 183 aa9.27□□□□□ -0.93
PAP1YKR002W MAK11P20484 414 aaKnown RBP9.26□□□□□ -0.93
PAP1YKR002W AIM7Q12156 149 aa9.24□□□□□ -0.93
PAP1YKR002W GUA1P38625 525 aaKnown RBP9.23□□□□□ -0.93
PAP1YKR002W EPS1P40557 701 aa9.22□□□□□ -0.93
PAP1YKR002W DIT2P21595 489 aa9.22□□□□□ -0.93
PAP1YKR002W RTG3P38165 486 aa9.21□□□□□ -0.94
PAP1YKR002W NUP42P49686 430 aaKnown RBP9.21□□□□□ -0.94
PAP1YKR002W IES2P40154 320 aa9.19□□□□□ -0.94
PAP1YKR002W MAM3Q12296 706 aa9.19□□□□□ -0.94
PAP1YKR002W COQ8P27697 501 aa9.16□□□□□ -0.94
PAP1YKR002W BDF1P35817 686 aa9.14□□□□□ -0.95
PAP1YKR002W YML020WQ03722 664 aa9.14□□□□□ -0.95
PAP1YKR002W VPS29P38759 282 aa9.12□□□□□ -0.95
PAP1YKR002W HGH1P48362 394 aaKnown RBP9.12□□□□□ -0.95
PAP1YKR002W REF2P42073 533 aaPredicted RBP9.11□□□□□ -0.95
PAP1YKR002W NOP8Q08287 484 aaPredicted RBP9.11□□□□□ -0.95
PAP1YKR002W PRY3P47033 881 aa9.1□□□□□ -0.95
PAP1YKR002W HPC2Q01448 625 aa9.07□□□□□ -0.96
PAP1YKR002W EDS1P38073 919 aa9.05□□□□□ -0.96
PAP1YKR002W TFB3Q03290 321 aa9.05□□□□□ -0.96
PAP1YKR002W MAK21Q12176 1025 aaKnown RBP9.05□□□□□ -0.96
PAP1YKR002W NOP53Q12080 455 aaKnown RBP9.04□□□□□ -0.96
PAP1YKR002W ORC1P54784 914 aaPredicted RBP9.01□□□□□ -0.97
PAP1YKR002W SUB2Q07478 446 aaKnown RBP9.01□□□□□ -0.97
PAP1YKR002W COX6P00427 148 aa9□□□□□ -0.97
PAP1YKR002W PKC1P24583 1151 aa9□□□□□ -0.97
PAP1YKR002W SLX8P40072 274 aa9□□□□□ -0.97
PAP1YKR002W ATF2P53296 535 aa9□□□□□ -0.97
PAP1YKR002W GEF1P37020 779 aa8.98□□□□□ -0.97
PAP1YKR002W SSA1P10591 642 aaKnown RBP8.97□□□□□ -0.97
PAP1YKR002W MIF2P35201 549 aa8.96□□□□□ -0.98
PAP1YKR002W STS1P38637 319 aa8.96□□□□□ -0.98
PAP1YKR002W GLN1P32288 370 aaKnown RBP8.94□□□□□ -0.98
PAP1YKR002W SCY1P53009 804 aa8.91□□□□□ -0.98
PAP1YKR002W BIM1P40013 344 aa8.9□□□□□ -0.98
PAP1YKR002W YDR090CQ03193 310 aa8.9□□□□□ -0.98
PAP1YKR002W YCK3P39962 524 aa8.89□□□□□ -0.99
PAP1YKR002W YMR1P47147 688 aaKnown RBP RIP-Chip data8.88□□□□□ -0.99not detected
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms