RNA–Protein interactions for RNA: YJR112W

NNF1, Transcript of Essential component of the MIND kinetochore complex, yeastyeast

Gene NNF1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NNF1YJR112W DRS1P32892 752 aaKnown RBP10.26□□□□□ -0.77
NNF1YJR112W MTC1P47018 478 aaKnown RBP10.22□□□□□ -0.77
NNF1YJR112W BFR2Q06631 534 aaKnown RBP8.97□□□□□ -0.97
NNF1YJR112W FAP1P53971 965 aa8.81□□□□□ -1
NNF1YJR112W DIP2Q12220 943 aaPredicted RBP8.65□□□□□ -1.02
NNF1YJR112W TFA1P36100 482 aa8.62□□□□□ -1.03
NNF1YJR112W AVT3P36062 692 aa8.61□□□□□ -1.03
NNF1YJR112W PRI1P10363 409 aa8.39□□□□□ -1.07
NNF1YJR112W RPG1P38249 964 aaKnown RBP8.34□□□□□ -1.07
NNF1YJR112W ISW2Q08773 1120 aa8.33□□□□□ -1.08
NNF1YJR112W PRY3P47033 881 aa8.28□□□□□ -1.08
NNF1YJR112W AAD16Q02895 342 aa8.27□□□□□ -1.09
NNF1YJR112W RSE1Q04693 1361 aaKnown RBP8.17□□□□□ -1.1
NNF1YJR112W TSR3Q12094 313 aaKnown RBP8.06□□□□□ -1.12
NNF1YJR112W RPL17AP05740 184 aaKnown RBP7.96□□□□□ -1.14
NNF1YJR112W RPL17BP46990 184 aaKnown RBP7.96□□□□□ -1.14
NNF1YJR112W YCK3P39962 524 aa7.9□□□□□ -1.14
NNF1YJR112W REB1P21538 810 aa7.83□□□□□ -1.16
NNF1YJR112W HAA1Q12753 694 aaKnown RBP7.65□□□□□ -1.18
NNF1YJR112W MRPL32P25348 183 aa7.61□□□□□ -1.19
NNF1YJR112W SPT21P35209 758 aa7.61□□□□□ -1.19
NNF1YJR112W RQC2Q12532 1038 aaKnown RBP7.51□□□□□ -1.21
NNF1YJR112W YKR023WP36119 530 aaKnown RBP7.48□□□□□ -1.21
NNF1YJR112W RIM101P33400 625 aa7.47□□□□□ -1.21
NNF1YJR112W CDC27P38042 758 aa7.42□□□□□ -1.22
NNF1YJR112W DCD1P06773 312 aa7.39□□□□□ -1.23
NNF1YJR112W HOP09932 586 aa7.39□□□□□ -1.23
NNF1YJR112W PTP3P40048 928 aa7.36□□□□□ -1.23
NNF1YJR112W TFC8Q12308 588 aa7.28□□□□□ -1.24
NNF1YJR112W OXP1P28273 1286 aa7.26□□□□□ -1.25
NNF1YJR112W SSP1P38871 571 aa7.24□□□□□ -1.25
NNF1YJR112W DMA1P38823 416 aa7.19□□□□□ -1.26
NNF1YJR112W YAH1Q12184 172 aaKnown RBP7.17□□□□□ -1.26
NNF1YJR112W YGL015CP33199 130 aa7.13□□□□□ -1.27
NNF1YJR112W YIL055CP40523 627 aaKnown RBP7.13□□□□□ -1.27
NNF1YJR112W MAP2P38174 421 aaKnown RBP7.12□□□□□ -1.27
NNF1YJR112W BCH2P36122 765 aa7.09□□□□□ -1.27
NNF1YJR112W YLR271WQ06152 274 aa7.09□□□□□ -1.27
NNF1YJR112W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.09□□□□□ -1.27not detected
NNF1YJR112W SCY1P53009 804 aa7.04□□□□□ -1.28
NNF1YJR112W RSM7P47150 247 aa7.03□□□□□ -1.28
NNF1YJR112W UBP10P53874 792 aaPredicted RBP6.97□□□□□ -1.29
NNF1YJR112W MGA2P40578 1113 aa6.95□□□□□ -1.3
NNF1YJR112W EPS1P40557 701 aa6.93□□□□□ -1.3
NNF1YJR112W AI2P03876 854 aa6.9□□□□□ -1.3
NNF1YJR112W BDF1P35817 686 aa6.89□□□□□ -1.31
NNF1YJR112W CST9Q06032 482 aa6.89□□□□□ -1.31
NNF1YJR112W PSD2P53037 1138 aaKnown RBP6.88□□□□□ -1.31
NNF1YJR112W SLX5P32828 619 aaKnown RBP6.84□□□□□ -1.31
NNF1YJR112W BBC1P47068 1157 aa6.81□□□□□ -1.32
NNF1YJR112W SAS10Q12136 610 aaPredicted RBP6.73□□□□□ -1.33
NNF1YJR112W MRM1P25270 412 aa6.7□□□□□ -1.34
NNF1YJR112W RAM2P29703 316 aa6.68□□□□□ -1.34
NNF1YJR112W TIF4632P39936 914 aaKnown RBP6.67□□□□□ -1.34
NNF1YJR112W TGL3P40308 642 aa6.65□□□□□ -1.34
NNF1YJR112W RCR1P38212 213 aa6.64□□□□□ -1.35
NNF1YJR112W LEO1P38439 464 aa6.62□□□□□ -1.35
NNF1YJR112W RTG3P38165 486 aa6.6□□□□□ -1.35
NNF1YJR112W LEU3P08638 886 aa6.58□□□□□ -1.36
NNF1YJR112W SET1P38827 1080 aaKnown RBP6.57□□□□□ -1.36
NNF1YJR112W PIB1Q06651 286 aa6.57□□□□□ -1.36
NNF1YJR112W MAK11P20484 414 aaKnown RBP6.54□□□□□ -1.36
NNF1YJR112W VPS29P38759 282 aa6.53□□□□□ -1.36
NNF1YJR112W TAF7Q05021 590 aa6.52□□□□□ -1.37
NNF1YJR112W YFR006WP43590 535 aa6.51□□□□□ -1.37
NNF1YJR112W YPR148CQ06523 435 aa6.51□□□□□ -1.37
NNF1YJR112W VPS70P47161 811 aa6.49□□□□□ -1.37
NNF1YJR112W IFH1P39520 1085 aa6.47□□□□□ -1.37
NNF1YJR112W STS1P38637 319 aa6.46□□□□□ -1.38
NNF1YJR112W YMR1P47147 688 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38not detected
NNF1YJR112W YAP5P40574 245 aa6.45□□□□□ -1.38
NNF1YJR112W CKB1P43639 278 aa6.45□□□□□ -1.38
NNF1YJR112W YOR238WQ08634 303 aa6.45□□□□□ -1.38
NNF1YJR112W COQ8P27697 501 aa6.44□□□□□ -1.38
NNF1YJR112W DBP1P24784 617 aaKnown RBP6.43□□□□□ -1.38
NNF1YJR112W SPB4P25808 606 aaPredicted RBP6.42□□□□□ -1.38
NNF1YJR112W MST1P07236 462 aa6.41□□□□□ -1.38
NNF1YJR112W NSR1P27476 414 aaKnown RBP RIP-Chip data6.4□□□□□ -1.38not detected
NNF1YJR112W EDS1P38073 919 aa6.39□□□□□ -1.39
NNF1YJR112W MIF2P35201 549 aa6.38□□□□□ -1.39
NNF1YJR112W RPN1P38764 993 aaKnown RBP6.38□□□□□ -1.39
NNF1YJR112W NOP53Q12080 455 aaKnown RBP6.38□□□□□ -1.39
NNF1YJR112W WSC3Q12215 556 aa6.38□□□□□ -1.39
NNF1YJR112W YBL029C-AQ3E756 94 aa6.38□□□□□ -1.39
NNF1YJR112W BUD31P25337 157 aaPredicted RBP6.37□□□□□ -1.39
NNF1YJR112W DSF2P38213 736 aa6.34□□□□□ -1.39
NNF1YJR112W PBS2P08018 668 aa6.33□□□□□ -1.4
NNF1YJR112W GTT3P39996 337 aa6.32□□□□□ -1.4
NNF1YJR112W PTC3P34221 468 aaKnown RBP6.31□□□□□ -1.4
NNF1YJR112W VMA1P17255 1071 aaKnown RBP6.3□□□□□ -1.4
NNF1YJR112W REF2P42073 533 aaPredicted RBP6.29□□□□□ -1.4
NNF1YJR112W UBP9P39967 754 aa6.28□□□□□ -1.4
NNF1YJR112W VNX1P42839 908 aa6.27□□□□□ -1.41
NNF1YJR112W SET4P42948 560 aa6.26□□□□□ -1.41
NNF1YJR112W MAM3Q12296 706 aa6.25□□□□□ -1.41
NNF1YJR112W YNR021WP53723 404 aaKnown RBP6.23□□□□□ -1.41
NNF1YJR112W DMA2P53924 522 aa6.23□□□□□ -1.41
NNF1YJR112W YOL036WQ08206 761 aa6.23□□□□□ -1.41
NNF1YJR112W IES2P40154 320 aa6.22□□□□□ -1.41
NNF1YJR112W SPP1Q03012 353 aa6.21□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms