RNA–Protein interactions for RNA: YHR206W

SKN7, Transcript of Nuclear response regulator and transcription factor, yeastyeast

Gene SKN7, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN7YHR206W MTC1P47018 478 aaKnown RBP10.23□□□□□ -0.77
SKN7YHR206W DRS1P32892 752 aaKnown RBP9.88□□□□□ -0.83
SKN7YHR206W FAP1P53971 965 aa9.47□□□□□ -0.89
SKN7YHR206W PRY3P47033 881 aa8.95□□□□□ -0.98
SKN7YHR206W PRI1P10363 409 aa8.58□□□□□ -1.04
SKN7YHR206W AAD16Q02895 342 aa8.57□□□□□ -1.04
SKN7YHR206W YCK3P39962 524 aa8.57□□□□□ -1.04
SKN7YHR206W DIP2Q12220 943 aaPredicted RBP8.55□□□□□ -1.04
SKN7YHR206W AVT3P36062 692 aa8.36□□□□□ -1.07
SKN7YHR206W ISW2Q08773 1120 aa8.36□□□□□ -1.07
SKN7YHR206W BFR2Q06631 534 aaKnown RBP8.35□□□□□ -1.07
SKN7YHR206W RPG1P38249 964 aaKnown RBP8.31□□□□□ -1.08
SKN7YHR206W HAA1Q12753 694 aaKnown RBP8.3□□□□□ -1.08
SKN7YHR206W RSE1Q04693 1361 aaKnown RBP8.13□□□□□ -1.11
SKN7YHR206W TSR3Q12094 313 aaKnown RBP8.1□□□□□ -1.11
SKN7YHR206W RPL17AP05740 184 aaKnown RBP7.88□□□□□ -1.15
SKN7YHR206W RPL17BP46990 184 aaKnown RBP7.88□□□□□ -1.15
SKN7YHR206W REB1P21538 810 aa7.79□□□□□ -1.16
SKN7YHR206W MRPL32P25348 183 aa7.7□□□□□ -1.18
SKN7YHR206W SPT21P35209 758 aa7.62□□□□□ -1.19
SKN7YHR206W TFA1P36100 482 aa7.6□□□□□ -1.19
SKN7YHR206W YGL015CP33199 130 aa7.55□□□□□ -1.2
SKN7YHR206W YKR023WP36119 530 aaKnown RBP7.45□□□□□ -1.22
SKN7YHR206W CDC27P38042 758 aa7.41□□□□□ -1.22
SKN7YHR206W RIM101P33400 625 aa7.39□□□□□ -1.23
SKN7YHR206W HOP09932 586 aa7.3□□□□□ -1.24
SKN7YHR206W DCD1P06773 312 aa7.29□□□□□ -1.24
SKN7YHR206W TFC8Q12308 588 aa7.28□□□□□ -1.24
SKN7YHR206W BUD31P25337 157 aaPredicted RBP7.26□□□□□ -1.25
SKN7YHR206W OXP1P28273 1286 aa7.19□□□□□ -1.26
SKN7YHR206W MAP2P38174 421 aaKnown RBP7.13□□□□□ -1.27
SKN7YHR206W UBP10P53874 792 aaPredicted RBP7.09□□□□□ -1.27
SKN7YHR206W BCH2P36122 765 aa7.07□□□□□ -1.28
SKN7YHR206W SCY1P53009 804 aa7.02□□□□□ -1.29
SKN7YHR206W PTP3P40048 928 aa7□□□□□ -1.29
SKN7YHR206W YAH1Q12184 172 aaKnown RBP7□□□□□ -1.29
SKN7YHR206W YIL055CP40523 627 aaKnown RBP6.99□□□□□ -1.29
SKN7YHR206W RSM7P47150 247 aa6.92□□□□□ -1.3
SKN7YHR206W YLR271WQ06152 274 aa6.91□□□□□ -1.3
SKN7YHR206W EPS1P40557 701 aa6.9□□□□□ -1.3
SKN7YHR206W SLX5P32828 619 aaKnown RBP6.87□□□□□ -1.31
SKN7YHR206W BDF1P35817 686 aa6.87□□□□□ -1.31
SKN7YHR206W SSP1P38871 571 aa6.86□□□□□ -1.31
SKN7YHR206W AI2P03876 854 aa6.84□□□□□ -1.31
SKN7YHR206W SIS1P25294 352 aaKnown RBP6.81□□□□□ -1.32
SKN7YHR206W BBC1P47068 1157 aa6.78□□□□□ -1.32
SKN7YHR206W TGL3P40308 642 aa6.77□□□□□ -1.33
SKN7YHR206W PSD2P53037 1138 aaKnown RBP6.77□□□□□ -1.33
SKN7YHR206W TIF4632P39936 914 aaKnown RBP6.75□□□□□ -1.33
SKN7YHR206W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.74□□□□□ -1.33not detected
SKN7YHR206W UBP9P39967 754 aa6.7□□□□□ -1.34
SKN7YHR206W CST9Q06032 482 aa6.7□□□□□ -1.34
SKN7YHR206W MGA2P40578 1113 aa6.66□□□□□ -1.34
SKN7YHR206W MRM1P25270 412 aa6.62□□□□□ -1.35
SKN7YHR206W NSR1P27476 414 aaKnown RBP RIP-Chip data6.53□□□□□ -1.36not detected
SKN7YHR206W RCR1P38212 213 aa6.53□□□□□ -1.36
SKN7YHR206W MST1P07236 462 aa6.51□□□□□ -1.37
SKN7YHR206W YAP5P40574 245 aa6.5□□□□□ -1.37
SKN7YHR206W YOR238WQ08634 303 aa6.49□□□□□ -1.37
SKN7YHR206W VPS29P38759 282 aa6.48□□□□□ -1.37
SKN7YHR206W YBL029C-AQ3E756 94 aa6.47□□□□□ -1.37
SKN7YHR206W RTG3P38165 486 aa6.47□□□□□ -1.37
SKN7YHR206W PIB1Q06651 286 aa6.45□□□□□ -1.38
SKN7YHR206W STS1P38637 319 aa6.42□□□□□ -1.38
SKN7YHR206W YMR1P47147 688 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
SKN7YHR206W YFR006WP43590 535 aa6.41□□□□□ -1.38
SKN7YHR206W DBP1P24784 617 aaKnown RBP6.39□□□□□ -1.39
SKN7YHR206W RAM2P29703 316 aa6.39□□□□□ -1.39
SKN7YHR206W VNX1P42839 908 aa6.35□□□□□ -1.39
SKN7YHR206W WSC3Q12215 556 aa6.33□□□□□ -1.4
SKN7YHR206W GTT3P39996 337 aa6.31□□□□□ -1.4
SKN7YHR206W VMA1P17255 1071 aaKnown RBP6.3□□□□□ -1.4
SKN7YHR206W MAK11P20484 414 aaKnown RBP6.28□□□□□ -1.4
SKN7YHR206W SPP1Q03012 353 aa6.26□□□□□ -1.41
SKN7YHR206W AIR2Q12476 344 aaKnown RBP6.24□□□□□ -1.41
SKN7YHR206W YOL036WQ08206 761 aa6.24□□□□□ -1.41
SKN7YHR206W SAM3Q08986 587 aa6.24□□□□□ -1.41
SKN7YHR206W EDS1P38073 919 aa6.23□□□□□ -1.41
SKN7YHR206W SET4P42948 560 aa6.22□□□□□ -1.41
SKN7YHR206W COQ8P27697 501 aa6.21□□□□□ -1.42
SKN7YHR206W MIF2P35201 549 aa6.21□□□□□ -1.42
SKN7YHR206W TIF11P38912 153 aaKnown RBP6.2□□□□□ -1.42
SKN7YHR206W FKH1P40466 484 aa6.2□□□□□ -1.42
SKN7YHR206W MSB4Q12317 492 aa6.18□□□□□ -1.42
SKN7YHR206W IOC2Q12072 812 aa6.17□□□□□ -1.42
SKN7YHR206W PTC3P34221 468 aaKnown RBP6.16□□□□□ -1.42
SKN7YHR206W ULI1P43604 169 aa6.16□□□□□ -1.42
SKN7YHR206W GYP5Q12344 894 aa6.15□□□□□ -1.43
SKN7YHR206W TRP5P00931 707 aaKnown RBP6.14□□□□□ -1.43
SKN7YHR206W DMA1P38823 416 aa6.13□□□□□ -1.43
SKN7YHR206W LDB19Q12502 818 aa6.13□□□□□ -1.43
SKN7YHR206W SET1P38827 1080 aaKnown RBP6.12□□□□□ -1.43
SKN7YHR206W EAP1P36041 632 aaKnown RBP6.11□□□□□ -1.43
SKN7YHR206W DCW1P36091 449 aa6.11□□□□□ -1.43
SKN7YHR206W YJL171CP46992 396 aa6.11□□□□□ -1.43
SKN7YHR206W RQC2Q12532 1038 aaKnown RBP6.11□□□□□ -1.43
SKN7YHR206W GRE2Q12068 342 aaKnown RBP6.11□□□□□ -1.43
SKN7YHR206W ATH1P48016 1211 aa6.07□□□□□ -1.44
SKN7YHR206W HTA1P04911 132 aaKnown RBP6.07□□□□□ -1.44
SKN7YHR206W HTA2P04912 132 aa6.07□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms