RNA–Protein interactions for RNA: YHR185C

PFS1, Transcript of Sporulation protein required for prospore membrane formation, yeastyeast

Gene PFS1, Length 714 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFS1YHR185C MTC1P47018 478 aaKnown RBP14.96□□□□□ -0.01
PFS1YHR185C FAP1P53971 965 aa14.84□□□□□ -0.03
PFS1YHR185C DRS1P32892 752 aaKnown RBP14.41□□□□□ -0.1
PFS1YHR185C PRY3P47033 881 aa14.03□□□□□ -0.16
PFS1YHR185C YCK3P39962 524 aa13.18□□□□□ -0.3
PFS1YHR185C AAD16Q02895 342 aa13.08□□□□□ -0.32
PFS1YHR185C HAA1Q12753 694 aaKnown RBP13.07□□□□□ -0.32
PFS1YHR185C PRI1P10363 409 aa12.89□□□□□ -0.35
PFS1YHR185C DIP2Q12220 943 aaPredicted RBP12.47□□□□□ -0.41
PFS1YHR185C ISW2Q08773 1120 aa12.36□□□□□ -0.43
PFS1YHR185C RPG1P38249 964 aaKnown RBP12.19□□□□□ -0.46
PFS1YHR185C BFR2Q06631 534 aaKnown RBP12.15□□□□□ -0.46
PFS1YHR185C AVT3P36062 692 aa12.12□□□□□ -0.47
PFS1YHR185C TSR3Q12094 313 aaKnown RBP12.06□□□□□ -0.48
PFS1YHR185C RSE1Q04693 1361 aaKnown RBP11.92□□□□□ -0.5
PFS1YHR185C YGL015CP33199 130 aa11.73□□□□□ -0.53
PFS1YHR185C BUD31P25337 157 aaPredicted RBP11.65□□□□□ -0.54
PFS1YHR185C MRPL32P25348 183 aa11.62□□□□□ -0.55
PFS1YHR185C RPL17AP05740 184 aaKnown RBP11.55□□□□□ -0.56
PFS1YHR185C RPL17BP46990 184 aaKnown RBP11.55□□□□□ -0.56
PFS1YHR185C REB1P21538 810 aa11.44□□□□□ -0.58
PFS1YHR185C SPT21P35209 758 aa11.07□□□□□ -0.64
PFS1YHR185C TFA1P36100 482 aa10.96□□□□□ -0.65
PFS1YHR185C SIS1P25294 352 aaKnown RBP10.89□□□□□ -0.67
PFS1YHR185C YKR023WP36119 530 aaKnown RBP10.88□□□□□ -0.67
PFS1YHR185C CDC27P38042 758 aa10.82□□□□□ -0.68
PFS1YHR185C RIM101P33400 625 aa10.76□□□□□ -0.69
PFS1YHR185C HOP09932 586 aa10.68□□□□□ -0.7
PFS1YHR185C DCD1P06773 312 aa10.65□□□□□ -0.7
PFS1YHR185C TFC8Q12308 588 aa10.64□□□□□ -0.71
PFS1YHR185C UBP10P53874 792 aaPredicted RBP10.63□□□□□ -0.71
PFS1YHR185C MAP2P38174 421 aaKnown RBP10.55□□□□□ -0.72
PFS1YHR185C UBP9P39967 754 aa10.54□□□□□ -0.72
PFS1YHR185C OXP1P28273 1286 aa10.46□□□□□ -0.73
PFS1YHR185C BCH2P36122 765 aa10.32□□□□□ -0.76
PFS1YHR185C SCY1P53009 804 aa10.28□□□□□ -0.76
PFS1YHR185C PTP3P40048 928 aa10.25□□□□□ -0.77
PFS1YHR185C YIL055CP40523 627 aaKnown RBP10.25□□□□□ -0.77
PFS1YHR185C TIF4632P39936 914 aaKnown RBP10.22□□□□□ -0.77
PFS1YHR185C TGL3P40308 642 aa10.22□□□□□ -0.77
PFS1YHR185C YAH1Q12184 172 aaKnown RBP10.22□□□□□ -0.77
PFS1YHR185C SLX5P32828 619 aaKnown RBP10.16□□□□□ -0.78
PFS1YHR185C RSM7P47150 247 aa10.1□□□□□ -0.79
PFS1YHR185C EPS1P40557 701 aa10.08□□□□□ -0.8
PFS1YHR185C YLR271WQ06152 274 aa10.04□□□□□ -0.8
PFS1YHR185C BDF1P35817 686 aa10.03□□□□□ -0.8
PFS1YHR185C AI2P03876 854 aa9.99□□□□□ -0.81
PFS1YHR185C SSP1P38871 571 aa9.99□□□□□ -0.81
PFS1YHR185C BBC1P47068 1157 aa9.93□□□□□ -0.82
PFS1YHR185C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.85□□□□□ -0.83not detected
PFS1YHR185C PSD2P53037 1138 aaKnown RBP9.83□□□□□ -0.84
PFS1YHR185C CST9Q06032 482 aa9.73□□□□□ -0.85
PFS1YHR185C YBL029C-AQ3E756 94 aa9.7□□□□□ -0.86
PFS1YHR185C MGA2P40578 1113 aa9.68□□□□□ -0.86
PFS1YHR185C MRM1P25270 412 aa9.67□□□□□ -0.86
PFS1YHR185C NSR1P27476 414 aaKnown RBP RIP-Chip data9.66□□□□□ -0.86not detected
PFS1YHR185C MST1P07236 462 aa9.64□□□□□ -0.87
PFS1YHR185C YOR238WQ08634 303 aa9.63□□□□□ -0.87
PFS1YHR185C YAP5P40574 245 aa9.57□□□□□ -0.88
PFS1YHR185C VNX1P42839 908 aa9.51□□□□□ -0.89
PFS1YHR185C YJL171CP46992 396 aa9.51□□□□□ -0.89
PFS1YHR185C RCR1P38212 213 aa9.48□□□□□ -0.89
PFS1YHR185C AIR2Q12476 344 aaKnown RBP9.47□□□□□ -0.89
PFS1YHR185C PIB1Q06651 286 aa9.46□□□□□ -0.9
PFS1YHR185C RTG3P38165 486 aa9.45□□□□□ -0.9
PFS1YHR185C VPS29P38759 282 aa9.44□□□□□ -0.9
PFS1YHR185C SPP1Q03012 353 aa9.42□□□□□ -0.9
PFS1YHR185C YMR1P47147 688 aaKnown RBP RIP-Chip data9.37□□□□□ -0.91not detected
PFS1YHR185C GTT3P39996 337 aa9.36□□□□□ -0.91
PFS1YHR185C YFR006WP43590 535 aa9.36□□□□□ -0.91
PFS1YHR185C DBP1P24784 617 aaKnown RBP9.35□□□□□ -0.91
PFS1YHR185C STS1P38637 319 aa9.34□□□□□ -0.91
PFS1YHR185C FKH1P40466 484 aa9.34□□□□□ -0.91
PFS1YHR185C WSC3Q12215 556 aa9.31□□□□□ -0.92
PFS1YHR185C RAM2P29703 316 aa9.26□□□□□ -0.93
PFS1YHR185C TIF11P38912 153 aaKnown RBP9.24□□□□□ -0.93
PFS1YHR185C VMA1P17255 1071 aaKnown RBP9.2□□□□□ -0.94
PFS1YHR185C BMT6Q12291 365 aa9.18□□□□□ -0.94
PFS1YHR185C MSB4Q12317 492 aa9.17□□□□□ -0.94
PFS1YHR185C MAK11P20484 414 aaKnown RBP9.13□□□□□ -0.95
PFS1YHR185C EAP1P36041 632 aaKnown RBP9.12□□□□□ -0.95
PFS1YHR185C SET4P42948 560 aa9.12□□□□□ -0.95
PFS1YHR185C ULI1P43604 169 aa9.12□□□□□ -0.95
PFS1YHR185C YOL036WQ08206 761 aa9.12□□□□□ -0.95
PFS1YHR185C SAM3Q08986 587 aa9.1□□□□□ -0.95
PFS1YHR185C MIF2P35201 549 aa9.07□□□□□ -0.96
PFS1YHR185C IOC2Q12072 812 aa9.07□□□□□ -0.96
PFS1YHR185C LDB19Q12502 818 aa9.07□□□□□ -0.96
PFS1YHR185C EDS1P38073 919 aa9.05□□□□□ -0.96
PFS1YHR185C COQ8P27697 501 aa9.03□□□□□ -0.96
PFS1YHR185C GYP5Q12344 894 aa9.01□□□□□ -0.97
PFS1YHR185C TRP5P00931 707 aaKnown RBP8.99□□□□□ -0.97
PFS1YHR185C PTC3P34221 468 aaKnown RBP8.98□□□□□ -0.97
PFS1YHR185C ABP1P15891 592 aaKnown RBP8.96□□□□□ -0.98
PFS1YHR185C DCW1P36091 449 aa8.96□□□□□ -0.98
PFS1YHR185C GRE2Q12068 342 aaKnown RBP8.93□□□□□ -0.98
PFS1YHR185C RTG1P32607 177 aa8.92□□□□□ -0.98
PFS1YHR185C YNL035CP53962 389 aaKnown RBP8.92□□□□□ -0.98
PFS1YHR185C RGA2Q06407 1009 aa8.91□□□□□ -0.98
PFS1YHR185C SEC61P32915 480 aa8.9□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 10 ms