RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeastyeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAL1YDR348C MTC1P47018 478 aaKnown RBP11.13□□□□□ -0.63
PAL1YDR348C DRS1P32892 752 aaKnown RBP10.8□□□□□ -0.68
PAL1YDR348C FAP1P53971 965 aa9.98□□□□□ -0.81
PAL1YDR348C PRY3P47033 881 aa9.37□□□□□ -0.91
PAL1YDR348C PRI1P10363 409 aa9.35□□□□□ -0.91
PAL1YDR348C BFR2Q06631 534 aaKnown RBP9.34□□□□□ -0.91
PAL1YDR348C AAD16Q02895 342 aa9.3□□□□□ -0.92
PAL1YDR348C ISW2Q08773 1120 aa9.21□□□□□ -0.93
PAL1YDR348C DIP2Q12220 943 aaPredicted RBP9.19□□□□□ -0.94
PAL1YDR348C RPG1P38249 964 aaKnown RBP9.13□□□□□ -0.95
PAL1YDR348C AVT3P36062 692 aa9.1□□□□□ -0.95
PAL1YDR348C TSR3Q12094 313 aaKnown RBP8.86□□□□□ -0.99
PAL1YDR348C YCK3P39962 524 aa8.84□□□□□ -0.99
PAL1YDR348C RSE1Q04693 1361 aaKnown RBP8.83□□□□□ -1
PAL1YDR348C TFA1P36100 482 aa8.81□□□□□ -1
PAL1YDR348C HAA1Q12753 694 aaKnown RBP8.78□□□□□ -1
PAL1YDR348C RPL17AP05740 184 aaKnown RBP8.56□□□□□ -1.04
PAL1YDR348C RPL17BP46990 184 aaKnown RBP8.56□□□□□ -1.04
PAL1YDR348C REB1P21538 810 aa8.51□□□□□ -1.05
PAL1YDR348C MRPL32P25348 183 aa8.51□□□□□ -1.05
PAL1YDR348C SPT21P35209 758 aa8.17□□□□□ -1.1
PAL1YDR348C YGL015CP33199 130 aa8.13□□□□□ -1.11
PAL1YDR348C CDC27P38042 758 aa8.09□□□□□ -1.11
PAL1YDR348C YKR023WP36119 530 aaKnown RBP8.08□□□□□ -1.12
PAL1YDR348C RIM101P33400 625 aa7.94□□□□□ -1.14
PAL1YDR348C HOP09932 586 aa7.93□□□□□ -1.14
PAL1YDR348C TFC8Q12308 588 aa7.91□□□□□ -1.14
PAL1YDR348C DCD1P06773 312 aa7.9□□□□□ -1.14
PAL1YDR348C MAP2P38174 421 aaKnown RBP7.83□□□□□ -1.16
PAL1YDR348C UBP10P53874 792 aaPredicted RBP7.83□□□□□ -1.16
PAL1YDR348C OXP1P28273 1286 aa7.74□□□□□ -1.17
PAL1YDR348C PTP3P40048 928 aa7.69□□□□□ -1.18
PAL1YDR348C SCY1P53009 804 aa7.69□□□□□ -1.18
PAL1YDR348C SPA2P23201 1466 aaKnown RBP7.69□□□□□ -1.18
PAL1YDR348C BCH2P36122 765 aa7.66□□□□□ -1.18
PAL1YDR348C SGS1P35187 1447 aa7.63□□□□□ -1.19
PAL1YDR348C YAH1Q12184 172 aaKnown RBP7.59□□□□□ -1.19
PAL1YDR348C SLX5P32828 619 aaKnown RBP7.58□□□□□ -1.2
PAL1YDR348C SSP1P38871 571 aa7.57□□□□□ -1.2
PAL1YDR348C SSN2P38931 1420 aa7.56□□□□□ -1.2
PAL1YDR348C YIL055CP40523 627 aaKnown RBP7.55□□□□□ -1.2
PAL1YDR348C TIF4632P39936 914 aaKnown RBP7.52□□□□□ -1.2
PAL1YDR348C YLR271WQ06152 274 aa7.51□□□□□ -1.21
PAL1YDR348C TGL3P40308 642 aa7.48□□□□□ -1.21
PAL1YDR348C EPS1P40557 701 aa7.47□□□□□ -1.21
PAL1YDR348C RSM7P47150 247 aa7.45□□□□□ -1.22
PAL1YDR348C BDF1P35817 686 aa7.44□□□□□ -1.22
PAL1YDR348C BUD31P25337 157 aaPredicted RBP7.42□□□□□ -1.22
PAL1YDR348C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.39□□□□□ -1.23not detected
PAL1YDR348C AI2P03876 854 aa7.36□□□□□ -1.23
PAL1YDR348C BBC1P47068 1157 aa7.36□□□□□ -1.23
PAL1YDR348C SKI3P17883 1432 aaKnown RBP7.35□□□□□ -1.23
PAL1YDR348C RQC2Q12532 1038 aaKnown RBP7.32□□□□□ -1.24
PAL1YDR348C CST9Q06032 482 aa7.31□□□□□ -1.24
PAL1YDR348C INO80P53115 1489 aa7.31□□□□□ -1.24
PAL1YDR348C PSD2P53037 1138 aaKnown RBP7.3□□□□□ -1.24
PAL1YDR348C DMA1P38823 416 aa7.29□□□□□ -1.24
PAL1YDR348C MGA2P40578 1113 aa7.29□□□□□ -1.24
PAL1YDR348C NOP2P40991 618 aaKnown RBP7.25□□□□□ -1.25
PAL1YDR348C UBP9P39967 754 aa7.24□□□□□ -1.25
PAL1YDR348C YOR238WQ08634 303 aa7.17□□□□□ -1.26
PAL1YDR348C MST1P07236 462 aa7.17□□□□□ -1.26
PAL1YDR348C NSR1P27476 414 aaKnown RBP RIP-Chip data7.15□□□□□ -1.27not detected
PAL1YDR348C YAP5P40574 245 aa7.12□□□□□ -1.27
PAL1YDR348C MRM1P25270 412 aa7.11□□□□□ -1.27
PAL1YDR348C SIS1P25294 352 aaKnown RBP7.09□□□□□ -1.27
PAL1YDR348C RCR1P38212 213 aa7.07□□□□□ -1.28
PAL1YDR348C YBL029C-AQ3E756 94 aa7.06□□□□□ -1.28
PAL1YDR348C MMS22Q06164 1454 aa7.05□□□□□ -1.28
PAL1YDR348C RAM2P29703 316 aa7.03□□□□□ -1.28
PAL1YDR348C CHD1P32657 1468 aa7.02□□□□□ -1.28
PAL1YDR348C TCB3Q03640 1545 aaKnown RBP7.01□□□□□ -1.29
PAL1YDR348C VNX1P42839 908 aa6.99□□□□□ -1.29
PAL1YDR348C PIB1Q06651 286 aa6.99□□□□□ -1.29
PAL1YDR348C RTG3P38165 486 aa6.98□□□□□ -1.29
PAL1YDR348C WSC3Q12215 556 aa6.98□□□□□ -1.29
PAL1YDR348C GTT3P39996 337 aa6.97□□□□□ -1.29
PAL1YDR348C VPS29P38759 282 aa6.96□□□□□ -1.29
PAL1YDR348C XRN1P22147 1528 aaKnown RBP6.93□□□□□ -1.3
PAL1YDR348C SPP1Q03012 353 aa6.93□□□□□ -1.3
PAL1YDR348C UFD4P33202 1483 aa6.92□□□□□ -1.3
PAL1YDR348C HSL1P34244 1518 aa6.91□□□□□ -1.3
PAL1YDR348C YMR1P47147 688 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
PAL1YDR348C TY1B-DR4Q07793 1604 aa6.89□□□□□ -1.31
PAL1YDR348C DBP1P24784 617 aaKnown RBP6.89□□□□□ -1.31
PAL1YDR348C YFR006WP43590 535 aa6.88□□□□□ -1.31
PAL1YDR348C STS1P38637 319 aa6.87□□□□□ -1.31
PAL1YDR348C TIF11P38912 153 aaKnown RBP6.87□□□□□ -1.31
PAL1YDR348C SAS10Q12136 610 aaPredicted RBP6.87□□□□□ -1.31
PAL1YDR348C MAK11P20484 414 aaKnown RBP6.86□□□□□ -1.31
PAL1YDR348C SPT6P23615 1451 aaKnown RBP6.85□□□□□ -1.31
PAL1YDR348C SET1P38827 1080 aaKnown RBP6.83□□□□□ -1.32
PAL1YDR348C TRM732Q03496 1420 aa6.83□□□□□ -1.32
PAL1YDR348C ULI1P43604 169 aa6.81□□□□□ -1.32
PAL1YDR348C HIR3P47171 1648 aa6.8□□□□□ -1.32
PAL1YDR348C VMA1P17255 1071 aaKnown RBP6.8□□□□□ -1.32
PAL1YDR348C REV3P14284 1504 aa6.79□□□□□ -1.32
PAL1YDR348C ENP1P38333 483 aaKnown RBP6.79□□□□□ -1.32
PAL1YDR348C SET4P42948 560 aa6.79□□□□□ -1.32
PAL1YDR348C YOL036WQ08206 761 aa6.79□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms