RNA–Protein interactions for RNA: YDR111C

ALT2, Transcript of Catalytically inactive alanine transaminase, yeastyeast

Gene ALT2, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ALT2YDR111C MTC1P47018 478 aaKnown RBP10.58□□□□□ -0.72
ALT2YDR111C RQC2Q12532 1038 aaKnown RBP10.1□□□□□ -0.79
ALT2YDR111C DRS1P32892 752 aaKnown RBP10.01□□□□□ -0.81
ALT2YDR111C BFR2Q06631 534 aaKnown RBP9.78□□□□□ -0.84
ALT2YDR111C FAP1P53971 965 aa9.36□□□□□ -0.91
ALT2YDR111C TAF7Q05021 590 aa9.36□□□□□ -0.91
ALT2YDR111C URN1Q06525 465 aaKnown RBP9.05□□□□□ -0.96
ALT2YDR111C PRI1P10363 409 aa8.85□□□□□ -0.99
ALT2YDR111C AAD16Q02895 342 aa8.8□□□□□ -1
ALT2YDR111C PRY3P47033 881 aa8.78□□□□□ -1
ALT2YDR111C ISW2Q08773 1120 aa8.76□□□□□ -1.01
ALT2YDR111C DIP2Q12220 943 aaPredicted RBP8.75□□□□□ -1.01
ALT2YDR111C TFA1P36100 482 aa8.73□□□□□ -1.01
ALT2YDR111C EBP2P36049 427 aaKnown RBP8.66□□□□□ -1.02
ALT2YDR111C SIS2P36024 562 aa8.65□□□□□ -1.02
ALT2YDR111C RPG1P38249 964 aaKnown RBP8.65□□□□□ -1.02
ALT2YDR111C CAB3P36076 571 aa8.64□□□□□ -1.03
ALT2YDR111C NOP2P40991 618 aaKnown RBP8.54□□□□□ -1.04
ALT2YDR111C AVT3P36062 692 aa8.46□□□□□ -1.05
ALT2YDR111C YRB30P53107 440 aaPredicted RBP8.44□□□□□ -1.06
ALT2YDR111C RSE1Q04693 1361 aaKnown RBP8.42□□□□□ -1.06
ALT2YDR111C YFR016CP43597 1233 aaKnown RBP8.37□□□□□ -1.07
ALT2YDR111C TSR3Q12094 313 aaKnown RBP8.36□□□□□ -1.07
ALT2YDR111C RPS0BP46654 252 aaKnown RBP8.32□□□□□ -1.08
ALT2YDR111C YCK3P39962 524 aa8.29□□□□□ -1.08
ALT2YDR111C HAA1Q12753 694 aaKnown RBP8.29□□□□□ -1.08
ALT2YDR111C NAP1P25293 417 aaKnown RBP8.23□□□□□ -1.09
ALT2YDR111C AIM44Q99299 758 aa8.23□□□□□ -1.09
ALT2YDR111C MNN4P36044 1178 aa8.16□□□□□ -1.1
ALT2YDR111C RPL17AP05740 184 aaKnown RBP8.13□□□□□ -1.11
ALT2YDR111C KRI1P42846 591 aaKnown RBP8.13□□□□□ -1.11
ALT2YDR111C RPL17BP46990 184 aaKnown RBP8.13□□□□□ -1.11
ALT2YDR111C REB1P21538 810 aa8.08□□□□□ -1.12
ALT2YDR111C LEO1P38439 464 aa8.08□□□□□ -1.12
ALT2YDR111C IOC4Q04213 475 aa8.08□□□□□ -1.12
ALT2YDR111C MRPL32P25348 183 aa8.06□□□□□ -1.12
ALT2YDR111C NSR1P27476 414 aaKnown RBP RIP-Chip data7.94□□□□□ -1.14not detected
ALT2YDR111C YPR148CQ06523 435 aa7.93□□□□□ -1.14
ALT2YDR111C DEF1P35732 738 aaKnown RBP7.92□□□□□ -1.14
ALT2YDR111C RLF2Q12495 606 aa7.89□□□□□ -1.15
ALT2YDR111C TCB2P48231 1178 aa7.88□□□□□ -1.15
ALT2YDR111C DMA1P38823 416 aa7.88□□□□□ -1.15
ALT2YDR111C SNU71P53207 620 aaKnown RBP7.87□□□□□ -1.15
ALT2YDR111C CWC22P53333 577 aaKnown RBP7.87□□□□□ -1.15
ALT2YDR111C TOP1P04786 769 aa7.86□□□□□ -1.15
ALT2YDR111C NOP53Q12080 455 aaKnown RBP7.83□□□□□ -1.16
ALT2YDR111C PLP2Q12017 286 aa7.82□□□□□ -1.16
ALT2YDR111C HSP82P02829 709 aaKnown RBP7.78□□□□□ -1.16
ALT2YDR111C NUG1P40010 520 aaKnown RBP7.78□□□□□ -1.16
ALT2YDR111C SPT21P35209 758 aa7.78□□□□□ -1.16
ALT2YDR111C QCR6P00127 147 aa7.76□□□□□ -1.17
ALT2YDR111C FPR3P38911 411 aaKnown RBP7.76□□□□□ -1.17
ALT2YDR111C ENV11P53246 860 aa7.73□□□□□ -1.17
ALT2YDR111C RIX1P38883 763 aaPredicted RBP7.73□□□□□ -1.17
ALT2YDR111C YGL015CP33199 130 aa7.71□□□□□ -1.18
ALT2YDR111C SAS10Q12136 610 aaPredicted RBP7.71□□□□□ -1.18
ALT2YDR111C MDG1P53885 366 aa7.7□□□□□ -1.18
ALT2YDR111C PSH1Q12161 406 aa7.7□□□□□ -1.18
ALT2YDR111C ENP1P38333 483 aaKnown RBP7.69□□□□□ -1.18
ALT2YDR111C YKR023WP36119 530 aaKnown RBP7.68□□□□□ -1.18
ALT2YDR111C SPT2P06843 333 aaPredicted RBP7.66□□□□□ -1.18
ALT2YDR111C CDC27P38042 758 aa7.65□□□□□ -1.18
ALT2YDR111C IFH1P39520 1085 aa7.65□□□□□ -1.18
ALT2YDR111C SKI3P17883 1432 aaKnown RBP7.65□□□□□ -1.19
ALT2YDR111C RPS0AP32905 252 aaKnown RBP7.63□□□□□ -1.19
ALT2YDR111C RPN1P38764 993 aaKnown RBP7.62□□□□□ -1.19
ALT2YDR111C HIF1Q12373 385 aa7.62□□□□□ -1.19
ALT2YDR111C SPT7P35177 1332 aa7.61□□□□□ -1.19
ALT2YDR111C RLP24Q07915 199 aaKnown RBP7.61□□□□□ -1.19
ALT2YDR111C YGR130CP53278 816 aa7.59□□□□□ -1.19
ALT2YDR111C RIM101P33400 625 aa7.57□□□□□ -1.2
ALT2YDR111C GIN4Q12263 1142 aa7.57□□□□□ -1.2
ALT2YDR111C TOA1P32773 286 aa7.56□□□□□ -1.2
ALT2YDR111C BRL1P38770 471 aa7.56□□□□□ -1.2
ALT2YDR111C FUN12P39730 1002 aaKnown RBP7.56□□□□□ -1.2
ALT2YDR111C SUB1P54000 292 aaKnown RBP7.55□□□□□ -1.2
ALT2YDR111C INO80P53115 1489 aa7.55□□□□□ -1.2
ALT2YDR111C PIL1P53252 339 aaKnown RBP7.54□□□□□ -1.2
ALT2YDR111C YTA7P40340 1379 aa7.54□□□□□ -1.2
ALT2YDR111C VPS72Q03388 795 aa7.53□□□□□ -1.2
ALT2YDR111C FPR4Q06205 392 aaPredicted RBP7.53□□□□□ -1.2
ALT2YDR111C RNA1P11745 407 aaKnown RBP7.52□□□□□ -1.2
ALT2YDR111C SPT16P32558 1035 aaKnown RBP7.52□□□□□ -1.2
ALT2YDR111C NMD2P38798 1089 aaKnown RBP7.52□□□□□ -1.2
ALT2YDR111C ORC1P54784 914 aaPredicted RBP7.52□□□□□ -1.21
ALT2YDR111C TLG1Q03322 224 aa7.52□□□□□ -1.21
ALT2YDR111C TFC8Q12308 588 aa7.52□□□□□ -1.21
ALT2YDR111C HOP09932 586 aa7.51□□□□□ -1.21
ALT2YDR111C TIF4632P39936 914 aaKnown RBP7.51□□□□□ -1.21
ALT2YDR111C NHA1Q99271 985 aa7.51□□□□□ -1.21
ALT2YDR111C SPC110P32380 944 aa7.5□□□□□ -1.21
ALT2YDR111C YNL011CP53980 444 aa7.47□□□□□ -1.21
ALT2YDR111C VPS4P52917 437 aa7.47□□□□□ -1.21
ALT2YDR111C MPP10P47083 593 aaKnown RBP7.46□□□□□ -1.22
ALT2YDR111C DCD1P06773 312 aa7.45□□□□□ -1.22
ALT2YDR111C ASF1P32447 279 aa7.44□□□□□ -1.22
ALT2YDR111C CLC1P17891 233 aa7.43□□□□□ -1.22
ALT2YDR111C UBP10P53874 792 aaPredicted RBP7.43□□□□□ -1.22
ALT2YDR111C TCB3Q03640 1545 aaKnown RBP7.43□□□□□ -1.22
ALT2YDR111C PET111P08468 800 aa7.42□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms