RNA–Protein interactions for RNA: YDL133C-A

RPL41B, Transcript of Ribosomal 60S subunit protein L41B, yeastyeast

Gene RPL41B, Length 78 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL41BYDL133C-A FAP1P53971 965 aa3.41□□□□□ -1.86
RPL41BYDL133C-A PRY3P47033 881 aa3.3□□□□□ -1.88
RPL41BYDL133C-A YCK3P39962 524 aa3.18□□□□□ -1.9
RPL41BYDL133C-A BUD31P25337 157 aaPredicted RBP3.03□□□□□ -1.92
RPL41BYDL133C-A HAA1Q12753 694 aaKnown RBP2.98□□□□□ -1.93
RPL41BYDL133C-A SIS1P25294 352 aaKnown RBP2.68□□□□□ -1.98
RPL41BYDL133C-A AAD16Q02895 342 aa2.59□□□□□ -1.99
RPL41BYDL133C-A RGA2Q06407 1009 aa2.57□□□□□ -2
RPL41BYDL133C-A YGL015CP33199 130 aa2.45□□□□□ -2.02
RPL41BYDL133C-A PRI1P10363 409 aa2.41□□□□□ -2.02
RPL41BYDL133C-A UBP9P39967 754 aa2.21□□□□□ -2.06
RPL41BYDL133C-A TSR3Q12094 313 aaKnown RBP2.19□□□□□ -2.06
RPL41BYDL133C-A RGA1P39083 1007 aa2.1□□□□□ -2.07
RPL41BYDL133C-A MRPL32P25348 183 aa2.06□□□□□ -2.08
RPL41BYDL133C-A AIR2Q12476 344 aaKnown RBP1.86□□□□□ -2.11
RPL41BYDL133C-A YJL171CP46992 396 aa1.85□□□□□ -2.11
RPL41BYDL133C-A MAP2P38174 421 aaKnown RBP1.84□□□□□ -2.11
RPL41BYDL133C-A UBP10P53874 792 aaPredicted RBP1.84□□□□□ -2.11
RPL41BYDL133C-A RPG1P38249 964 aaKnown RBP1.82□□□□□ -2.12
RPL41BYDL133C-A TGL3P40308 642 aa1.8□□□□□ -2.12
RPL41BYDL133C-A YBL029C-AQ3E756 94 aa1.78□□□□□ -2.12
RPL41BYDL133C-A FKH1P40466 484 aa1.75□□□□□ -2.13
RPL41BYDL133C-A ISW2Q08773 1120 aa1.74□□□□□ -2.13
RPL41BYDL133C-A TIF4632P39936 914 aaKnown RBP1.73□□□□□ -2.13
RPL41BYDL133C-A CDC27P38042 758 aa1.72□□□□□ -2.13
RPL41BYDL133C-A MTC1P47018 478 aaKnown RBP1.71□□□□□ -2.14
RPL41BYDL133C-A VNX1P42839 908 aa1.69□□□□□ -2.14
RPL41BYDL133C-A BMT6Q12291 365 aa1.69□□□□□ -2.14
RPL41BYDL133C-A SPP1Q03012 353 aa1.63□□□□□ -2.15
RPL41BYDL133C-A BCK2P33306 851 aa1.57□□□□□ -2.16
RPL41BYDL133C-A MST1P07236 462 aa1.56□□□□□ -2.16
RPL41BYDL133C-A SRC1Q03707 834 aa1.55□□□□□ -2.16
RPL41BYDL133C-A SLX5P32828 619 aaKnown RBP1.54□□□□□ -2.16
RPL41BYDL133C-A SCY1P53009 804 aa1.52□□□□□ -2.17
RPL41BYDL133C-A YPL062WQ02781 134 aa1.52□□□□□ -2.17
RPL41BYDL133C-A TIF11P38912 153 aaKnown RBP1.5□□□□□ -2.17
RPL41BYDL133C-A LDB19Q12502 818 aa1.49□□□□□ -2.17
RPL41BYDL133C-A DPS1P04802 557 aaKnown RBP1.48□□□□□ -2.17
RPL41BYDL133C-A WSC3Q12215 556 aa1.47□□□□□ -2.17
RPL41BYDL133C-A NCR1Q12200 1170 aa1.44□□□□□ -2.18
RPL41BYDL133C-A XDJ1P39102 459 aa1.43□□□□□ -2.18
RPL41BYDL133C-A IOC2Q12072 812 aa1.43□□□□□ -2.18
RPL41BYDL133C-A YOR238WQ08634 303 aa1.41□□□□□ -2.18
RPL41BYDL133C-A AVT3P36062 692 aa1.4□□□□□ -2.19
RPL41BYDL133C-A ULI1P43604 169 aa1.36□□□□□ -2.19
RPL41BYDL133C-A CHL1P22516 861 aaPredicted RBP1.33□□□□□ -2.2
RPL41BYDL133C-A DCD1P06773 312 aa1.32□□□□□ -2.2
RPL41BYDL133C-A VRP1P37370 817 aa1.31□□□□□ -2.2
RPL41BYDL133C-A RTG1P32607 177 aa1.3□□□□□ -2.2
RPL41BYDL133C-A YKR023WP36119 530 aaKnown RBP1.3□□□□□ -2.2
RPL41BYDL133C-A HOP09932 586 aa1.26□□□□□ -2.21
RPL41BYDL133C-A PRE3P38624 215 aa1.26□□□□□ -2.21
RPL41BYDL133C-A TFC8Q12308 588 aa1.25□□□□□ -2.21
RPL41BYDL133C-A MTC5Q03897 1148 aa1.23□□□□□ -2.21
RPL41BYDL133C-A SAP30P38429 201 aa1.22□□□□□ -2.21
RPL41BYDL133C-A NSR1P27476 414 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
RPL41BYDL133C-A SEC61P32915 480 aa1.21□□□□□ -2.22
RPL41BYDL133C-A DAN4P47179 1161 aa1.2□□□□□ -2.22
RPL41BYDL133C-A REB1P21538 810 aa1.17□□□□□ -2.22
RPL41BYDL133C-A YNL035CP53962 389 aaKnown RBP1.17□□□□□ -2.22
RPL41BYDL133C-A GTT3P39996 337 aa1.16□□□□□ -2.22
RPL41BYDL133C-A BCH2P36122 765 aa1.15□□□□□ -2.23
RPL41BYDL133C-A YAP5P40574 245 aa1.15□□□□□ -2.23
RPL41BYDL133C-A TRK1P12685 1235 aa1.14□□□□□ -2.23
RPL41BYDL133C-A TRP5P00931 707 aaKnown RBP1.13□□□□□ -2.23
RPL41BYDL133C-A GAR1P28007 205 aaKnown RBP1.13□□□□□ -2.23
RPL41BYDL133C-A RAS1P01119 309 aa1.12□□□□□ -2.23
RPL41BYDL133C-A EAP1P36041 632 aaKnown RBP1.12□□□□□ -2.23
RPL41BYDL133C-A GBP2P25555 427 aaKnown RBP RIP-Chip data1.11□□□□□ -2.23not detected
RPL41BYDL133C-A TFG1P41895 735 aaPredicted RBP1.11□□□□□ -2.23
RPL41BYDL133C-A YDR344CQ05510 147 aa1.11□□□□□ -2.23
RPL41BYDL133C-A NRD1P53617 575 aaKnown RBP RIP-Chip data1.09□□□□□ -2.23not detected
RPL41BYDL133C-A YDL129WQ07555 291 aa1.09□□□□□ -2.23
RPL41BYDL133C-A MSB4Q12317 492 aa1.09□□□□□ -2.23
RPL41BYDL133C-A RPL17AP05740 184 aaKnown RBP1.08□□□□□ -2.24
RPL41BYDL133C-A RPL17BP46990 184 aaKnown RBP1.08□□□□□ -2.24
RPL41BYDL133C-A SPT21P35209 758 aa1.06□□□□□ -2.24
RPL41BYDL133C-A BDF1P35817 686 aa1.06□□□□□ -2.24
RPL41BYDL133C-A EPS1P40557 701 aa1.02□□□□□ -2.25
RPL41BYDL133C-A RSE1Q04693 1361 aaKnown RBP1.02□□□□□ -2.25
RPL41BYDL133C-A SET4P42948 560 aa1.01□□□□□ -2.25
RPL41BYDL133C-A YOL036WQ08206 761 aa0.99□□□□□ -2.25
RPL41BYDL133C-A ELP4Q02884 456 aaKnown RBP0.98□□□□□ -2.25
RPL41BYDL133C-A PEX29Q03370 554 aa0.97□□□□□ -2.25
RPL41BYDL133C-A PIB1Q06651 286 aa0.96□□□□□ -2.26
RPL41BYDL133C-A OXP1P28273 1286 aa0.93□□□□□ -2.26
RPL41BYDL133C-A BRE2P43132 505 aa0.93□□□□□ -2.26
RPL41BYDL133C-A YDL176WQ12027 708 aa0.93□□□□□ -2.26
RPL41BYDL133C-A JIP4Q03361 876 aa0.92□□□□□ -2.26
RPL41BYDL133C-A LSB3P43603 459 aaKnown RBP0.91□□□□□ -2.26
RPL41BYDL133C-A MET22P32179 357 aa0.9□□□□□ -2.27
RPL41BYDL133C-A AMS1P22855 1083 aa0.89□□□□□ -2.27
RPL41BYDL133C-A ARH1P48360 493 aa0.87□□□□□ -2.27
RPL41BYDL133C-A SDH2P21801 266 aa0.86□□□□□ -2.27
RPL41BYDL133C-A SPT23P35210 1082 aa0.86□□□□□ -2.27
RPL41BYDL133C-A GCR2Q01722 534 aa0.86□□□□□ -2.27
RPL41BYDL133C-A ENV9Q08651 330 aa0.86□□□□□ -2.27
RPL41BYDL133C-A SAM3Q08986 587 aa0.84□□□□□ -2.27
RPL41BYDL133C-A PTC4P38089 393 aa0.82□□□□□ -2.28
RPL41BYDL133C-A PML39Q03760 334 aa0.82□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 352 ms