RNA–Protein interactions for RNA: YBL055C

YBL055C, Transcript of 3'-->5' exonuclease and endonuclease with a possible role in apoptosis, yeastyeast

Gene YBL055C, Length 1,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBL055CYBL055C DRS1P32892 752 aaKnown RBP10.85□□□□□ -0.67
YBL055CYBL055C MTC1P47018 478 aaKnown RBP10.84□□□□□ -0.67
YBL055CYBL055C BFR2Q06631 534 aaKnown RBP9.41□□□□□ -0.9
YBL055CYBL055C DIP2Q12220 943 aaPredicted RBP9.24□□□□□ -0.93
YBL055CYBL055C AVT3P36062 692 aa9.17□□□□□ -0.94
YBL055CYBL055C FAP1P53971 965 aa9.08□□□□□ -0.96
YBL055CYBL055C TFA1P36100 482 aa8.96□□□□□ -0.98
YBL055CYBL055C ISW2Q08773 1120 aa8.81□□□□□ -1
YBL055CYBL055C RSE1Q04693 1361 aaKnown RBP8.73□□□□□ -1.01
YBL055CYBL055C PRI1P10363 409 aa8.68□□□□□ -1.02
YBL055CYBL055C RPG1P38249 964 aaKnown RBP8.62□□□□□ -1.03
YBL055CYBL055C PRY3P47033 881 aa8.54□□□□□ -1.04
YBL055CYBL055C AAD16Q02895 342 aa8.51□□□□□ -1.05
YBL055CYBL055C RPL17AP05740 184 aaKnown RBP8.35□□□□□ -1.07
YBL055CYBL055C RPL17BP46990 184 aaKnown RBP8.35□□□□□ -1.07
YBL055CYBL055C REB1P21538 810 aa8.26□□□□□ -1.09
YBL055CYBL055C TSR3Q12094 313 aaKnown RBP8.16□□□□□ -1.1
YBL055CYBL055C SPT21P35209 758 aa8.13□□□□□ -1.11
YBL055CYBL055C RIM101P33400 625 aa8.02□□□□□ -1.13
YBL055CYBL055C HAA1Q12753 694 aaKnown RBP7.97□□□□□ -1.13
YBL055CYBL055C MRPL32P25348 183 aa7.9□□□□□ -1.14
YBL055CYBL055C YCK3P39962 524 aa7.86□□□□□ -1.15
YBL055CYBL055C YKR023WP36119 530 aaKnown RBP7.81□□□□□ -1.16
YBL055CYBL055C OXP1P28273 1286 aa7.73□□□□□ -1.17
YBL055CYBL055C RQC2Q12532 1038 aaKnown RBP7.7□□□□□ -1.18
YBL055CYBL055C TFC8Q12308 588 aa7.68□□□□□ -1.18
YBL055CYBL055C SSP1P38871 571 aa7.67□□□□□ -1.18
YBL055CYBL055C PTP3P40048 928 aa7.64□□□□□ -1.19
YBL055CYBL055C CDC27P38042 758 aa7.62□□□□□ -1.19
YBL055CYBL055C YIL055CP40523 627 aaKnown RBP7.62□□□□□ -1.19
YBL055CYBL055C HOP09932 586 aa7.58□□□□□ -1.2
YBL055CYBL055C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.58□□□□□ -1.2not detected
YBL055CYBL055C YAH1Q12184 172 aaKnown RBP7.54□□□□□ -1.2
YBL055CYBL055C RSM7P47150 247 aa7.53□□□□□ -1.2
YBL055CYBL055C YLR271WQ06152 274 aa7.53□□□□□ -1.2
YBL055CYBL055C DCD1P06773 312 aa7.49□□□□□ -1.21
YBL055CYBL055C BCH2P36122 765 aa7.43□□□□□ -1.22
YBL055CYBL055C MGA2P40578 1113 aa7.43□□□□□ -1.22
YBL055CYBL055C UBP10P53874 792 aaPredicted RBP7.43□□□□□ -1.22
YBL055CYBL055C YGL015CP33199 130 aa7.39□□□□□ -1.23
YBL055CYBL055C AI2P03876 854 aa7.38□□□□□ -1.23
YBL055CYBL055C PSD2P53037 1138 aaKnown RBP7.38□□□□□ -1.23
YBL055CYBL055C BBC1P47068 1157 aa7.37□□□□□ -1.23
YBL055CYBL055C EPS1P40557 701 aa7.31□□□□□ -1.24
YBL055CYBL055C MAP2P38174 421 aaKnown RBP7.29□□□□□ -1.24
YBL055CYBL055C DMA1P38823 416 aa7.29□□□□□ -1.24
YBL055CYBL055C SCY1P53009 804 aa7.28□□□□□ -1.24
YBL055CYBL055C CST9Q06032 482 aa7.27□□□□□ -1.25
YBL055CYBL055C BDF1P35817 686 aa7.26□□□□□ -1.25
YBL055CYBL055C SLX5P32828 619 aaKnown RBP7.2□□□□□ -1.26
YBL055CYBL055C MRM1P25270 412 aa7.13□□□□□ -1.27
YBL055CYBL055C RTG3P38165 486 aa7.09□□□□□ -1.27
YBL055CYBL055C TIF4632P39936 914 aaKnown RBP7.09□□□□□ -1.27
YBL055CYBL055C NSR1P27476 414 aaKnown RBP RIP-Chip data7.08□□□□□ -1.28not detected
YBL055CYBL055C RAM2P29703 316 aa7.06□□□□□ -1.28
YBL055CYBL055C TGL3P40308 642 aa7.04□□□□□ -1.28
YBL055CYBL055C SAS10Q12136 610 aaPredicted RBP7.04□□□□□ -1.28
YBL055CYBL055C MAK11P20484 414 aaKnown RBP7.01□□□□□ -1.29
YBL055CYBL055C RCR1P38212 213 aa7.01□□□□□ -1.29
YBL055CYBL055C VPS29P38759 282 aa7□□□□□ -1.29
YBL055CYBL055C BUD31P25337 157 aaPredicted RBP6.99□□□□□ -1.29
YBL055CYBL055C YMR1P47147 688 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
YBL055CYBL055C IFH1P39520 1085 aa6.95□□□□□ -1.3
YBL055CYBL055C NOP53Q12080 455 aaKnown RBP6.95□□□□□ -1.3
YBL055CYBL055C YAP5P40574 245 aa6.93□□□□□ -1.3
YBL055CYBL055C SET1P38827 1080 aaKnown RBP6.92□□□□□ -1.3
YBL055CYBL055C YPR148CQ06523 435 aa6.92□□□□□ -1.3
YBL055CYBL055C YOR238WQ08634 303 aa6.91□□□□□ -1.3
YBL055CYBL055C STS1P38637 319 aa6.89□□□□□ -1.31
YBL055CYBL055C MST1P07236 462 aa6.88□□□□□ -1.31
YBL055CYBL055C DBP1P24784 617 aaKnown RBP6.88□□□□□ -1.31
YBL055CYBL055C COQ8P27697 501 aa6.86□□□□□ -1.31
YBL055CYBL055C LEU3P08638 886 aa6.84□□□□□ -1.31
YBL055CYBL055C CKB1P43639 278 aa6.84□□□□□ -1.31
YBL055CYBL055C EDS1P38073 919 aa6.79□□□□□ -1.32
YBL055CYBL055C YFR006WP43590 535 aa6.79□□□□□ -1.32
YBL055CYBL055C VMA1P17255 1071 aaKnown RBP6.78□□□□□ -1.32
YBL055CYBL055C MIF2P35201 549 aa6.78□□□□□ -1.32
YBL055CYBL055C SAM3Q08986 587 aa6.77□□□□□ -1.33
YBL055CYBL055C PTC3P34221 468 aaKnown RBP6.76□□□□□ -1.33
YBL055CYBL055C VPS70P47161 811 aa6.76□□□□□ -1.33
YBL055CYBL055C LEO1P38439 464 aa6.75□□□□□ -1.33
YBL055CYBL055C ABP1P15891 592 aaKnown RBP6.72□□□□□ -1.33
YBL055CYBL055C GTT3P39996 337 aa6.71□□□□□ -1.34
YBL055CYBL055C PIB1Q06651 286 aa6.71□□□□□ -1.34
YBL055CYBL055C GUT1P32190 709 aa6.69□□□□□ -1.34
YBL055CYBL055C DSF2P38213 736 aa6.69□□□□□ -1.34
YBL055CYBL055C GRE2Q12068 342 aaKnown RBP6.69□□□□□ -1.34
YBL055CYBL055C MSB4Q12317 492 aa6.68□□□□□ -1.34
YBL055CYBL055C REF2P42073 533 aaPredicted RBP6.67□□□□□ -1.34
YBL055CYBL055C MAK21Q12176 1025 aaKnown RBP6.67□□□□□ -1.34
YBL055CYBL055C ATH1P48016 1211 aa6.66□□□□□ -1.34
YBL055CYBL055C GYP5Q12344 894 aa6.65□□□□□ -1.34
YBL055CYBL055C PBS2P08018 668 aa6.64□□□□□ -1.35
YBL055CYBL055C SPB4P25808 606 aaPredicted RBP6.64□□□□□ -1.35
YBL055CYBL055C YOL036WQ08206 761 aa6.63□□□□□ -1.35
YBL055CYBL055C SIS1P25294 352 aaKnown RBP6.62□□□□□ -1.35
YBL055CYBL055C RPN1P38764 993 aaKnown RBP6.61□□□□□ -1.35
YBL055CYBL055C COX6P00427 148 aa6.59□□□□□ -1.35
YBL055CYBL055C EAP1P36041 632 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms