RNA–Protein interactions for RNA: YBL050W

SEC17, Transcript of Alpha-SNAP cochaperone, yeastyeast

Gene SEC17, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC17YBL050W DRS1P32892 752 aaKnown RBP11.99□□□□□ -0.49
SEC17YBL050W MTC1P47018 478 aaKnown RBP11.1□□□□□ -0.63
SEC17YBL050W BFR2Q06631 534 aaKnown RBP10.73□□□□□ -0.69
SEC17YBL050W TFA1P36100 482 aa10.54□□□□□ -0.72
SEC17YBL050W RQC2Q12532 1038 aaKnown RBP10.16□□□□□ -0.78
SEC17YBL050W AVT3P36062 692 aa9.93□□□□□ -0.82
SEC17YBL050W DIP2Q12220 943 aaPredicted RBP9.93□□□□□ -0.82
SEC17YBL050W TAF7Q05021 590 aa9.82□□□□□ -0.84
SEC17YBL050W RSE1Q04693 1361 aaKnown RBP9.2□□□□□ -0.94
SEC17YBL050W DMA1P38823 416 aa9.02□□□□□ -0.97
SEC17YBL050W ISW2Q08773 1120 aa8.96□□□□□ -0.98
SEC17YBL050W LEO1P38439 464 aa8.86□□□□□ -0.99
SEC17YBL050W RPL17AP05740 184 aaKnown RBP8.79□□□□□ -1
SEC17YBL050W RPL17BP46990 184 aaKnown RBP8.79□□□□□ -1
SEC17YBL050W PTP3P40048 928 aa8.78□□□□□ -1
SEC17YBL050W RPG1P38249 964 aaKnown RBP8.76□□□□□ -1.01
SEC17YBL050W REB1P21538 810 aa8.67□□□□□ -1.02
SEC17YBL050W SSP1P38871 571 aa8.52□□□□□ -1.05
SEC17YBL050W RIM101P33400 625 aa8.5□□□□□ -1.05
SEC17YBL050W PRI1P10363 409 aa8.47□□□□□ -1.05
SEC17YBL050W SPT21P35209 758 aa8.41□□□□□ -1.06
SEC17YBL050W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.39□□□□□ -1.07not detected
SEC17YBL050W AIM44Q99299 758 aa8.39□□□□□ -1.07
SEC17YBL050W FAP1P53971 965 aa8.37□□□□□ -1.07
SEC17YBL050W YAH1Q12184 172 aaKnown RBP8.33□□□□□ -1.08
SEC17YBL050W LEU3P08638 886 aa8.28□□□□□ -1.08
SEC17YBL050W YIL055CP40523 627 aaKnown RBP8.28□□□□□ -1.08
SEC17YBL050W AAD16Q02895 342 aa8.27□□□□□ -1.09
SEC17YBL050W NAP1P25293 417 aaKnown RBP8.23□□□□□ -1.09
SEC17YBL050W OXP1P28273 1286 aa8.23□□□□□ -1.09
SEC17YBL050W SAS10Q12136 610 aaPredicted RBP8.21□□□□□ -1.1
SEC17YBL050W URN1Q06525 465 aaKnown RBP8.2□□□□□ -1.1
SEC17YBL050W YLR271WQ06152 274 aa8.16□□□□□ -1.1
SEC17YBL050W MGA2P40578 1113 aa8.14□□□□□ -1.11
SEC17YBL050W TSR3Q12094 313 aaKnown RBP8.13□□□□□ -1.11
SEC17YBL050W RSM7P47150 247 aa8.07□□□□□ -1.12
SEC17YBL050W RPN1P38764 993 aaKnown RBP8.05□□□□□ -1.12
SEC17YBL050W IOC4Q04213 475 aa8.03□□□□□ -1.12
SEC17YBL050W IFH1P39520 1085 aa8.02□□□□□ -1.13
SEC17YBL050W DMA2P53924 522 aa8.01□□□□□ -1.13
SEC17YBL050W RLF2Q12495 606 aa8.01□□□□□ -1.13
SEC17YBL050W YKR023WP36119 530 aaKnown RBP7.97□□□□□ -1.13
SEC17YBL050W YRB30P53107 440 aaPredicted RBP7.97□□□□□ -1.13
SEC17YBL050W CST9Q06032 482 aa7.95□□□□□ -1.14
SEC17YBL050W SPB4P25808 606 aaPredicted RBP7.94□□□□□ -1.14
SEC17YBL050W HOP09932 586 aa7.88□□□□□ -1.15
SEC17YBL050W MRPL32P25348 183 aa7.88□□□□□ -1.15
SEC17YBL050W CKB1P43639 278 aa7.88□□□□□ -1.15
SEC17YBL050W AI2P03876 854 aa7.86□□□□□ -1.15
SEC17YBL050W PSD2P53037 1138 aaKnown RBP7.85□□□□□ -1.15
SEC17YBL050W TFC8Q12308 588 aa7.85□□□□□ -1.15
SEC17YBL050W BBC1P47068 1157 aa7.84□□□□□ -1.15
SEC17YBL050W SET1P38827 1080 aaKnown RBP7.83□□□□□ -1.16
SEC17YBL050W VPS70P47161 811 aa7.82□□□□□ -1.16
SEC17YBL050W ORC1P54784 914 aaPredicted RBP7.81□□□□□ -1.16
SEC17YBL050W TOP1P04786 769 aa7.8□□□□□ -1.16
SEC17YBL050W DCD1P06773 312 aa7.77□□□□□ -1.17
SEC17YBL050W RAM2P29703 316 aa7.76□□□□□ -1.17
SEC17YBL050W ABP1P15891 592 aaKnown RBP7.75□□□□□ -1.17
SEC17YBL050W PRY3P47033 881 aa7.75□□□□□ -1.17
SEC17YBL050W HGH1P48362 394 aaKnown RBP7.74□□□□□ -1.17
SEC17YBL050W YPR148CQ06523 435 aa7.74□□□□□ -1.17
SEC17YBL050W SNU71P53207 620 aaKnown RBP7.68□□□□□ -1.18
SEC17YBL050W MRM1P25270 412 aa7.67□□□□□ -1.18
SEC17YBL050W PBS2P08018 668 aa7.65□□□□□ -1.18
SEC17YBL050W BCH2P36122 765 aa7.64□□□□□ -1.19
SEC17YBL050W RTG3P38165 486 aa7.64□□□□□ -1.19
SEC17YBL050W DSF2P38213 736 aa7.64□□□□□ -1.19
SEC17YBL050W KIN1P13185 1064 aa7.63□□□□□ -1.19
SEC17YBL050W CDC27P38042 758 aa7.63□□□□□ -1.19
SEC17YBL050W YNR021WP53723 404 aaKnown RBP7.63□□□□□ -1.19
SEC17YBL050W MAK11P20484 414 aaKnown RBP7.61□□□□□ -1.19
SEC17YBL050W NOP7P53261 605 aaKnown RBP7.61□□□□□ -1.19
SEC17YBL050W EPS1P40557 701 aa7.6□□□□□ -1.19
SEC17YBL050W YML020WQ03722 664 aa7.6□□□□□ -1.19
SEC17YBL050W RCR1P38212 213 aa7.58□□□□□ -1.2
SEC17YBL050W BRL1P38770 471 aa7.57□□□□□ -1.2
SEC17YBL050W MAM3Q12296 706 aa7.57□□□□□ -1.2
SEC17YBL050W GLC3P32775 704 aa7.54□□□□□ -1.2
SEC17YBL050W NOP8Q08287 484 aaPredicted RBP7.54□□□□□ -1.2
SEC17YBL050W AIM7Q12156 149 aa7.54□□□□□ -1.2
SEC17YBL050W MNN4P36044 1178 aa7.52□□□□□ -1.21
SEC17YBL050W BDF1P35817 686 aa7.51□□□□□ -1.21
SEC17YBL050W COQ8P27697 501 aa7.5□□□□□ -1.21
SEC17YBL050W IES2P40154 320 aa7.5□□□□□ -1.21
SEC17YBL050W REF2P42073 533 aaPredicted RBP7.5□□□□□ -1.21
SEC17YBL050W SLX8P40072 274 aa7.48□□□□□ -1.21
SEC17YBL050W ATF2P53296 535 aa7.48□□□□□ -1.21
SEC17YBL050W SUB1P54000 292 aaKnown RBP7.48□□□□□ -1.21
SEC17YBL050W NOP53Q12080 455 aaKnown RBP7.48□□□□□ -1.21
SEC17YBL050W MAK21Q12176 1025 aaKnown RBP7.47□□□□□ -1.21
SEC17YBL050W MIF2P35201 549 aa7.45□□□□□ -1.22
SEC17YBL050W DIT2P21595 489 aa7.43□□□□□ -1.22
SEC17YBL050W ASF1P32447 279 aa7.43□□□□□ -1.22
SEC17YBL050W VPS72Q03388 795 aa7.43□□□□□ -1.22
SEC17YBL050W GUA1P38625 525 aaKnown RBP7.42□□□□□ -1.22
SEC17YBL050W NUG1P40010 520 aaKnown RBP7.42□□□□□ -1.22
SEC17YBL050W SCY1P53009 804 aa7.42□□□□□ -1.22
SEC17YBL050W NUP42P49686 430 aaKnown RBP7.41□□□□□ -1.22
SEC17YBL050W VPS29P38759 282 aa7.4□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms