RNA–Protein interactions for RNA: ENST00000641340.1

MFSD8-223, Transcript of major facilitator superfamily domain containing 8, human

Gene MFSD8, Length 2,098 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MFSD8-223	ENST00000641340	AEBP2	Q6ZN18	517 aa	Predicted RBP	20.81	■□□□□ 0.92
MFSD8-223	ENST00000641340	CHIC1	Q5VXU3	224 aa		20.26	■□□□□ 0.83
MFSD8-223	ENST00000641340	PHF23	Q9BUL5	403 aa	Predicted RBP	17.94	■□□□□ 0.46
MFSD8-223	ENST00000641340	SENP3	Q9H4L4	574 aa	Predicted RBP	17.47	■□□□□ 0.39
MFSD8-223	ENST00000641340	PLPPR3	Q6T4P5	718 aa		16.43	■□□□□ 0.22
MFSD8-223	ENST00000641340	FOXD1	Q16676	465 aa		16.33	■□□□□ 0.21
MFSD8-223	ENST00000641340	PPP6R1	Q9UPN7	881 aa		15.85	■□□□□ 0.13
MFSD8-223	ENST00000641340	ADRA2B	P18089	450 aa		15.82	■□□□□ 0.12
MFSD8-223	ENST00000641340	PIAS4	Q8N2W9	510 aa	Predicted RBP	15.37	■□□□□ 0.05
MFSD8-223	ENST00000641340	SLC24A1	O60721	1099 aa		15.06	■□□□□ 0
MFSD8-223	ENST00000641340	MSH5	O43196	834 aa		14.88	□□□□□ -0.03
MFSD8-223	ENST00000641340	PPP4R3CP	Q6ZMV5	832 aa		14.56	□□□□□ -0.08
MFSD8-223	ENST00000641340	EHMT2	Q96KQ7	1210 aa		14.45	□□□□□ -0.1
MFSD8-223	ENST00000641340	MAPK8IP2	Q13387	824 aa	Predicted RBP	14.37	□□□□□ -0.11
MFSD8-223	ENST00000641340	KCNA4	P22459	653 aa		14.37	□□□□□ -0.11
MFSD8-223	ENST00000641340	SCAF1	Q9H7N4	1312 aa	Known RBP	14.26	□□□□□ -0.13
MFSD8-223	ENST00000641340	NISCH	Q9Y2I1	1504 aa		14.09	□□□□□ -0.15
MFSD8-223	ENST00000641340	NCBP3	Q53F19	620 aa	Known RBP	14.08	□□□□□ -0.16
MFSD8-223	ENST00000641340	POTED	Q86YR6	584 aa		14.07	□□□□□ -0.16
MFSD8-223	ENST00000641340	CNKSR2	Q8WXI2	1034 aa		14.07	□□□□□ -0.16
MFSD8-223	ENST00000641340	NPM3	O75607	178 aa	Known RBP	14.01	□□□□□ -0.17
MFSD8-223	ENST00000641340	DMRT2	Q9Y5R5	561 aa		13.99	□□□□□ -0.17
MFSD8-223	ENST00000641340	RTN4	Q9NQC3	1192 aa	Known RBP	13.79	□□□□□ -0.2
MFSD8-223	ENST00000641340	RNF216	Q9NWF9	866 aa	Predicted RBP	13.78	□□□□□ -0.2
MFSD8-223	ENST00000641340	HOXD11	P31277	338 aa	Predicted RBP	13.72	□□□□□ -0.21
MFSD8-223	ENST00000641340	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.61	□□□□□ -0.23
MFSD8-223	ENST00000641340	CSRNP3	Q8WYN3	585 aa		13.52	□□□□□ -0.25
MFSD8-223	ENST00000641340	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.51	□□□□□ -0.25
MFSD8-223	ENST00000641340	DCAF8L1	A6NGE4	600 aa		13.45	□□□□□ -0.26
MFSD8-223	ENST00000641340	DNAJC5B	Q9UF47	199 aa		13.43	□□□□□ -0.26
MFSD8-223	ENST00000641340	DAXX	Q9UER7	740 aa	Predicted RBP	13.41	□□□□□ -0.26
MFSD8-223	ENST00000641340	ZBTB22	O15209	634 aa		13.27	□□□□□ -0.29
MFSD8-223	ENST00000641340	SLC4A2	P04920	1241 aa		13.25	□□□□□ -0.29
MFSD8-223	ENST00000641340	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.09	□□□□□ -0.31	3e-8	■□□□□ 9.4
MFSD8-223	ENST00000641340	FOXD4L1	Q9NU39	408 aa		13.09	□□□□□ -0.31
MFSD8-223	ENST00000641340	PRKCSH	P14314	528 aa	Predicted RBP	13.07	□□□□□ -0.32
MFSD8-223	ENST00000641340		U3KPZ7	1027 aa	Predicted RBP	12.93	□□□□□ -0.34
MFSD8-223	ENST00000641340	MYCN	P04198	464 aa	Predicted RBP	12.85	□□□□□ -0.35
MFSD8-223	ENST00000641340	RNF39	Q9H2S5	420 aa		12.84	□□□□□ -0.35
MFSD8-223	ENST00000641340	ARX	Q96QS3	562 aa		12.79	□□□□□ -0.36
MFSD8-223	ENST00000641340	TIMELESS	Q9UNS1	1208 aa		12.74	□□□□□ -0.37
MFSD8-223	ENST00000641340	TAOK2	Q9UL54	1235 aa		12.71	□□□□□ -0.38
MFSD8-223	ENST00000641340	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.69	□□□□□ -0.38
MFSD8-223	ENST00000641340	SAMD1	Q6SPF0	538 aa	Predicted RBP	12.63	□□□□□ -0.39
MFSD8-223	ENST00000641340	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	12.62	□□□□□ -0.39
MFSD8-223	ENST00000641340	C1QBP	Q07021	282 aa	Known RBP	12.62	□□□□□ -0.39
MFSD8-223	ENST00000641340	HNRNPUL2	Q1KMD3	747 aa	Known RBP	12.62	□□□□□ -0.39
MFSD8-223	ENST00000641340	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.61	□□□□□ -0.39
MFSD8-223	ENST00000641340	BCAN	Q96GW7	911 aa		12.58	□□□□□ -0.39
MFSD8-223	ENST00000641340	TULP1	O00294	542 aa	Predicted RBP	12.56	□□□□□ -0.4
MFSD8-223	ENST00000641340	ATXN8OS	P0DMR3	200 aa		12.56	□□□□□ -0.4
MFSD8-223	ENST00000641340	TPRN	Q4KMQ1	711 aa		12.49	□□□□□ -0.41
MFSD8-223	ENST00000641340	CAPN15	O75808	1086 aa		12.48	□□□□□ -0.41
MFSD8-223	ENST00000641340	TRH	P20396	242 aa	Predicted RBP	12.47	□□□□□ -0.41
MFSD8-223	ENST00000641340	CACNB1	Q02641	598 aa	Predicted RBP	12.46	□□□□□ -0.41
MFSD8-223	ENST00000641340	PLCB2	Q00722	1185 aa		12.45	□□□□□ -0.42
MFSD8-223	ENST00000641340	APLP2	Q06481	763 aa		12.41	□□□□□ -0.42
MFSD8-223	ENST00000641340	HOMEZ	Q8IX15	550 aa		12.39	□□□□□ -0.43
MFSD8-223	ENST00000641340	CCDC180	Q9P1Z9	1646 aa		12.38	□□□□□ -0.43
MFSD8-223	ENST00000641340	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.38	□□□□□ -0.43
MFSD8-223	ENST00000641340	ABCB7	O75027	752 aa		12.32	□□□□□ -0.44
MFSD8-223	ENST00000641340	RANGAP1	P46060	587 aa	Predicted RBP	12.32	□□□□□ -0.44
MFSD8-223	ENST00000641340	HAP1	P54257	671 aa	Predicted RBP	12.31	□□□□□ -0.44
MFSD8-223	ENST00000641340	POLA2	Q14181	598 aa		12.28	□□□□□ -0.44
MFSD8-223	ENST00000641340	DSG3	P32926	999 aa		12.26	□□□□□ -0.45
MFSD8-223	ENST00000641340	TTBK1	Q5TCY1	1321 aa	Predicted RBP	12.25	□□□□□ -0.45
MFSD8-223	ENST00000641340	PELP1	Q8IZL8	1130 aa	Known RBP	12.22	□□□□□ -0.45
MFSD8-223	ENST00000641340	GTF3C3	Q9Y5Q9	886 aa		12.22	□□□□□ -0.45
MFSD8-223	ENST00000641340	ERICH6	Q7L0X2	663 aa		12.13	□□□□□ -0.47
MFSD8-223	ENST00000641340	PODXL2	Q9NZ53	605 aa		12.11	□□□□□ -0.47
MFSD8-223	ENST00000641340	FKBP8	Q14318	412 aa		12.1	□□□□□ -0.47
MFSD8-223	ENST00000641340	MKRN4P	Q13434	485 aa	Predicted RBP	12.09	□□□□□ -0.47
MFSD8-223	ENST00000641340	KLHL34	Q8N239	644 aa		12.06	□□□□□ -0.48
MFSD8-223	ENST00000641340	VSIG10	Q8N0Z9	540 aa		12.04	□□□□□ -0.48
MFSD8-223	ENST00000641340	MYT1	Q01538	1121 aa		12.02	□□□□□ -0.49
MFSD8-223	ENST00000641340	TMEM132A	Q24JP5	1023 aa		11.96	□□□□□ -0.5
MFSD8-223	ENST00000641340	FBLN2	P98095	1184 aa		11.95	□□□□□ -0.5
MFSD8-223	ENST00000641340	KDM2A	Q9Y2K7	1162 aa		11.91	□□□□□ -0.5
MFSD8-223	ENST00000641340	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.9	□□□□□ -0.51
MFSD8-223	ENST00000641340	C14orf37	Q86TY3	774 aa		11.86	□□□□□ -0.51
MFSD8-223	ENST00000641340	OSCAR	Q8IYS5	282 aa		11.86	□□□□□ -0.51
MFSD8-223	ENST00000641340	ZCCHC6	Q5VYS8	1495 aa	Known RBP	11.84	□□□□□ -0.51
MFSD8-223	ENST00000641340	NPM2	Q86SE8	214 aa	Known RBP	11.81	□□□□□ -0.52
MFSD8-223	ENST00000641340	SPDYE4	A6NLX3	237 aa		11.78	□□□□□ -0.52
MFSD8-223	ENST00000641340	ABCC9	O60706	1549 aa		11.71	□□□□□ -0.53
MFSD8-223	ENST00000641340	DCAF8L2	P0C7V8	631 aa		11.69	□□□□□ -0.54
MFSD8-223	ENST00000641340	ZNF692	Q9BU19	519 aa	Predicted RBP	11.69	□□□□□ -0.54
MFSD8-223	ENST00000641340	SPDYE2B	A6NHP3	402 aa		11.66	□□□□□ -0.54
MFSD8-223	ENST00000641340	SPDYE6	P0CI01	402 aa		11.66	□□□□□ -0.54
MFSD8-223	ENST00000641340	SPDYE2	Q495Y8	402 aa		11.66	□□□□□ -0.54
MFSD8-223	ENST00000641340	DCAF1	Q9Y4B6	1507 aa		11.64	□□□□□ -0.55
MFSD8-223	ENST00000641340	SUPT5H	O00267	1087 aa	Known RBP	11.64	□□□□□ -0.55
MFSD8-223	ENST00000641340	TRIM26	Q12899	539 aa	Predicted RBP	11.64	□□□□□ -0.55
MFSD8-223	ENST00000641340	FBXO3	Q9UK99	471 aa		11.63	□□□□□ -0.55
MFSD8-223	ENST00000641340	EIF5B	O60841	1220 aa	Known RBP	11.61	□□□□□ -0.55
MFSD8-223	ENST00000641340	SSUH2	Q9Y2M2	353 aa		11.61	□□□□□ -0.55
MFSD8-223	ENST00000641340	PROM2	Q8N271	834 aa		11.57	□□□□□ -0.56
MFSD8-223	ENST00000641340	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.56	□□□□□ -0.56
MFSD8-223	ENST00000641340	RBM42	Q9BTD8	480 aa	Known RBP	11.55	□□□□□ -0.56
MFSD8-223	ENST00000641340	UBTF	P17480	764 aa	Known RBP	11.53	□□□□□ -0.56

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