RNA–Protein interactions for RNA: ENST00000641001.1

CASC19-204, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,055 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-204ENST00000641001 CHIC1Q5VXU3 224 aa15.36■□□□□ 0.05
CASC19-204ENST00000641001 AEBP2Q6ZN18 517 aaPredicted RBP15.13■□□□□ 0.01
CASC19-204ENST00000641001 PHF23Q9BUL5 403 aaPredicted RBP13.65□□□□□ -0.22
CASC19-204ENST00000641001 PLPPR3Q6T4P5 718 aa12.77□□□□□ -0.36
CASC19-204ENST00000641001 SENP3Q9H4L4 574 aaPredicted RBP12.63□□□□□ -0.39
CASC19-204ENST00000641001 ADRA2BP18089 450 aa12.06□□□□□ -0.48
CASC19-204ENST00000641001 EHMT2Q96KQ7 1210 aa12.04□□□□□ -0.48
CASC19-204ENST00000641001 KCNA4P22459 653 aa11.95□□□□□ -0.5
CASC19-204ENST00000641001 PPP6R1Q9UPN7 881 aa11.85□□□□□ -0.51
CASC19-204ENST00000641001 FOXD1Q16676 465 aa11.71□□□□□ -0.53
CASC19-204ENST00000641001 CSRNP3Q8WYN3 585 aa11.5□□□□□ -0.57
CASC19-204ENST00000641001 SLC4A1APQ9BWU0 796 aaKnown RBP11.47□□□□□ -0.57
CASC19-204ENST00000641001 PPP4R3CPQ6ZMV5 832 aa11.38□□□□□ -0.59
CASC19-204ENST00000641001 PIAS4Q8N2W9 510 aaPredicted RBP11.23□□□□□ -0.61
CASC19-204ENST00000641001 NCBP3Q53F19 620 aaKnown RBP11.22□□□□□ -0.61
CASC19-204ENST00000641001 NPM3O75607 178 aaKnown RBP11.13□□□□□ -0.63
CASC19-204ENST00000641001 ZBTB22O15209 634 aa11.02□□□□□ -0.64
CASC19-204ENST00000641001 CNKSR2Q8WXI2 1034 aa10.86□□□□□ -0.67
CASC19-204ENST00000641001 SCAF1Q9H7N4 1312 aaKnown RBP10.74□□□□□ -0.69
CASC19-204ENST00000641001 SLC24A1O60721 1099 aa10.73□□□□□ -0.69
CASC19-204ENST00000641001 FOXD4L1Q9NU39 408 aa10.73□□□□□ -0.69
CASC19-204ENST00000641001 POTEDQ86YR6 584 aa10.72□□□□□ -0.69
CASC19-204ENST00000641001 RTN4Q9NQC3 1192 aaKnown RBP10.69□□□□□ -0.7
CASC19-204ENST00000641001 MAPK8IP2Q13387 824 aaPredicted RBP10.61□□□□□ -0.71
CASC19-204ENST00000641001 AMER1Q5JTC6 1135 aaPredicted RBP10.58□□□□□ -0.72
CASC19-204ENST00000641001 DNAJC5BQ9UF47 199 aa10.51□□□□□ -0.73
CASC19-204ENST00000641001 RNF216Q9NWF9 866 aaPredicted RBP10.47□□□□□ -0.73
CASC19-204ENST00000641001 MSH5O43196 834 aa10.45□□□□□ -0.74
CASC19-204ENST00000641001 FKBP8Q14318 412 aa10.38□□□□□ -0.75
CASC19-204ENST00000641001 SLC4A2P04920 1241 aa10.35□□□□□ -0.75
CASC19-204ENST00000641001 HOXD11P31277 338 aaPredicted RBP10.24□□□□□ -0.77
CASC19-204ENST00000641001 MYCNP04198 464 aaPredicted RBP10.22□□□□□ -0.77
CASC19-204ENST00000641001 ATXN8OSP0DMR3 200 aa10.21□□□□□ -0.77
CASC19-204ENST00000641001 DMRT2Q9Y5R5 561 aa10.19□□□□□ -0.78
CASC19-204ENST00000641001 ATF5Q9Y2D1 282 aaPredicted RBP10□□□□□ -0.81
CASC19-204ENST00000641001 DCAF8L1A6NGE4 600 aa9.86□□□□□ -0.83
CASC19-204ENST00000641001 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.84□□□□□ -0.83
CASC19-204ENST00000641001 SAMD1Q6SPF0 538 aaPredicted RBP9.79□□□□□ -0.84
CASC19-204ENST00000641001 PLCB2Q00722 1185 aa9.78□□□□□ -0.84
CASC19-204ENST00000641001 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.76□□□□□ -0.85
CASC19-204ENST00000641001 HNRNPUL2Q1KMD3 747 aaKnown RBP9.76□□□□□ -0.85
CASC19-204ENST00000641001 U3KPZ7 1027 aaPredicted RBP9.75□□□□□ -0.85
CASC19-204ENST00000641001 HAP1P54257 671 aaPredicted RBP9.71□□□□□ -0.86
CASC19-204ENST00000641001 FBXO3Q9UK99 471 aa9.71□□□□□ -0.86
CASC19-204ENST00000641001 DCAF8L2P0C7V8 631 aa9.7□□□□□ -0.86
CASC19-204ENST00000641001 ZNF219Q9P2Y4 722 aaPredicted RBP9.68□□□□□ -0.86
CASC19-204ENST00000641001 SPDYE4A6NLX3 237 aa9.67□□□□□ -0.86
CASC19-204ENST00000641001 VASPP50552 380 aaPredicted RBP9.62□□□□□ -0.87
CASC19-204ENST00000641001 PRKCSHP14314 528 aaPredicted RBP9.6□□□□□ -0.87
CASC19-204ENST00000641001 NISCHQ9Y2I1 1504 aa9.6□□□□□ -0.87
CASC19-204ENST00000641001 IFNLR1Q8IU57 520 aaPredicted RBP9.57□□□□□ -0.88
CASC19-204ENST00000641001 MKRN4PQ13434 485 aaPredicted RBP9.56□□□□□ -0.88
CASC19-204ENST00000641001 BCANQ96GW7 911 aa9.55□□□□□ -0.88
CASC19-204ENST00000641001 PROM2Q8N271 834 aa9.52□□□□□ -0.89
CASC19-204ENST00000641001 PKD2Q13563 968 aa9.51□□□□□ -0.89
CASC19-204ENST00000641001 TAOK2Q9UL54 1235 aa9.49□□□□□ -0.89
CASC19-204ENST00000641001 APLP2Q06481 763 aa9.47□□□□□ -0.89
CASC19-204ENST00000641001 VSIG10Q8N0Z9 540 aa9.46□□□□□ -0.89
CASC19-204ENST00000641001 FBLN2P98095 1184 aa9.44□□□□□ -0.9
CASC19-204ENST00000641001 KDM2AQ9Y2K7 1162 aa9.39□□□□□ -0.91
CASC19-204ENST00000641001 TRHP20396 242 aaPredicted RBP9.38□□□□□ -0.91
CASC19-204ENST00000641001 TPRNQ4KMQ1 711 aa9.38□□□□□ -0.91
CASC19-204ENST00000641001 PAXIP1Q6ZW49 1069 aaPredicted RBP9.36□□□□□ -0.91
CASC19-204ENST00000641001 CFAP44Q96MT7 982 aa9.36□□□□□ -0.91
CASC19-204ENST00000641001 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.36□□□□□ -0.91
CASC19-204ENST00000641001 POLA2Q14181 598 aa9.35□□□□□ -0.91
CASC19-204ENST00000641001 NPM1P06748 294 aaKnown RBP eCLIP9.34□□□□□ -0.91
CASC19-204ENST00000641001 KLHL34Q8N239 644 aa9.34□□□□□ -0.91
CASC19-204ENST00000641001 ECM2O94769 699 aaPredicted RBP9.33□□□□□ -0.92
CASC19-204ENST00000641001 BBXQ8WY36 941 aaPredicted RBP9.33□□□□□ -0.92
CASC19-204ENST00000641001 SPINK5Q9NQ38 1064 aaPredicted RBP9.33□□□□□ -0.92
CASC19-204ENST00000641001 SPOCK2Q92563 424 aa9.29□□□□□ -0.92
CASC19-204ENST00000641001 RGL2O15211 777 aa9.24□□□□□ -0.93
CASC19-204ENST00000641001 CAPN15O75808 1086 aa9.24□□□□□ -0.93
CASC19-204ENST00000641001 TSHZ2Q9NRE2 1034 aa9.22□□□□□ -0.93
CASC19-204ENST00000641001 SPRYD3Q8NCJ5 442 aa9.2□□□□□ -0.94
CASC19-204ENST00000641001 PLCD3Q8N3E9 789 aa9.18□□□□□ -0.94
CASC19-204ENST00000641001 ABCB7O75027 752 aa9.17□□□□□ -0.94
CASC19-204ENST00000641001 CHGAP10645 457 aaKnown RBP9.14□□□□□ -0.95
CASC19-204ENST00000641001 ZBTB12Q9Y330 459 aaPredicted RBP9.12□□□□□ -0.95
CASC19-204ENST00000641001 ZNF692Q9BU19 519 aaPredicted RBP9.12□□□□□ -0.95
CASC19-204ENST00000641001 MIER1Q8N108 512 aa9.11□□□□□ -0.95
CASC19-204ENST00000641001 STAG3Q9UJ98 1225 aa9.11□□□□□ -0.95
CASC19-204ENST00000641001 CIZ1Q9ULV3 898 aaPredicted RBP9.11□□□□□ -0.95
CASC19-204ENST00000641001 DNAJC5Q9H3Z4 198 aa9.09□□□□□ -0.95
CASC19-204ENST00000641001 ABCC9O60706 1549 aa9.08□□□□□ -0.96
CASC19-204ENST00000641001 NBR1Q14596 966 aa9.07□□□□□ -0.96
CASC19-204ENST00000641001 RNF39Q9H2S5 420 aa9.05□□□□□ -0.96
CASC19-204ENST00000641001 PABPN1Q86U42 306 aaKnown RBP eCLIP9.03□□□□□ -0.96
CASC19-204ENST00000641001 OSCARQ8IYS5 282 aa9.03□□□□□ -0.96
CASC19-204ENST00000641001 SSUH2Q9Y2M2 353 aa8.99□□□□□ -0.97
CASC19-204ENST00000641001 TIMELESSQ9UNS1 1208 aa8.98□□□□□ -0.97
CASC19-204ENST00000641001 SPDYE2BA6NHP3 402 aa8.97□□□□□ -0.97
CASC19-204ENST00000641001 SPDYE6P0CI01 402 aa8.97□□□□□ -0.97
CASC19-204ENST00000641001 SPDYE2Q495Y8 402 aa8.97□□□□□ -0.97
CASC19-204ENST00000641001 TULP1O00294 542 aaPredicted RBP8.96□□□□□ -0.97
CASC19-204ENST00000641001 PLEKHG5O94827 1062 aa8.95□□□□□ -0.98
CASC19-204ENST00000641001 HS6ST3Q8IZP7 471 aa8.95□□□□□ -0.98
CASC19-204ENST00000641001 C1QBPQ07021 282 aaKnown RBP8.94□□□□□ -0.98
CASC19-204ENST00000641001 ZBTB47Q9UFB7 747 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms