RNA–Protein interactions for RNA: ENST00000640934.1

KCNMA1-292, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-292ENST00000640934 NISCHQ9Y2I1 1504 aa20.18■□□□□ 0.82
KCNMA1-292ENST00000640934 SHROOM4Q9ULL8 1493 aa17.47■□□□□ 0.39
KCNMA1-292ENST00000640934 SUPT5HO00267 1087 aaKnown RBP17.2■□□□□ 0.34
KCNMA1-292ENST00000640934 DCAF8L2P0C7V8 631 aa17.14■□□□□ 0.34
KCNMA1-292ENST00000640934 CCDC180Q9P1Z9 1646 aa17.05■□□□□ 0.32
KCNMA1-292ENST00000640934 ZCCHC6Q5VYS8 1495 aaKnown RBP17.03■□□□□ 0.32
KCNMA1-292ENST00000640934 CHIC1Q5VXU3 224 aa16.57■□□□□ 0.24
KCNMA1-292ENST00000640934 DCAF1Q9Y4B6 1507 aa16.47■□□□□ 0.23
KCNMA1-292ENST00000640934 MYO15BQ96JP2 1530 aa16.37■□□□□ 0.21
KCNMA1-292ENST00000640934 HRCP23327 699 aa16.21■□□□□ 0.19
KCNMA1-292ENST00000640934 PCGF6Q9BYE7 350 aa16.21■□□□□ 0.19
KCNMA1-292ENST00000640934 PELP1Q8IZL8 1130 aaKnown RBP16.17■□□□□ 0.18
KCNMA1-292ENST00000640934 LOC105371045A0A1W2PR82 267 aa16.15■□□□□ 0.18
KCNMA1-292ENST00000640934 PPARGC1BQ86YN6 1023 aaKnown RBP16.14■□□□□ 0.17
KCNMA1-292ENST00000640934 SCRIBQ14160 1630 aa16.13■□□□□ 0.17
KCNMA1-292ENST00000640934 ABCC9O60706 1549 aa16.05■□□□□ 0.16
KCNMA1-292ENST00000640934 RSF1Q96T23 1441 aaPredicted RBP16.01■□□□□ 0.15
KCNMA1-292ENST00000640934 TRIM41Q8WV44 630 aa16■□□□□ 0.15
KCNMA1-292ENST00000640934 FAM9AQ8IZU1 332 aaPredicted RBP15.93■□□□□ 0.14
KCNMA1-292ENST00000640934 EHMT2Q96KQ7 1210 aa15.86■□□□□ 0.13
KCNMA1-292ENST00000640934 NACADO15069 1562 aa15.85■□□□□ 0.13
KCNMA1-292ENST00000640934 TRIM26Q12899 539 aaPredicted RBP15.85■□□□□ 0.13
KCNMA1-292ENST00000640934 RB1CC1Q8TDY2 1594 aa15.8■□□□□ 0.12
KCNMA1-292ENST00000640934 CECR2Q9BXF3 1484 aa15.77■□□□□ 0.11
KCNMA1-292ENST00000640934 MROH2BQ7Z745 1585 aa15.69■□□□□ 0.1
KCNMA1-292ENST00000640934 SCAF1Q9H7N4 1312 aaKnown RBP15.66■□□□□ 0.1
KCNMA1-292ENST00000640934 MYT1Q01538 1121 aa15.61■□□□□ 0.09
KCNMA1-292ENST00000640934 WIZO95785 1651 aa15.59■□□□□ 0.09
KCNMA1-292ENST00000640934 ZEB1P37275 1124 aaPredicted RBP15.56■□□□□ 0.08
KCNMA1-292ENST00000640934 BAZ1AQ9NRL2 1556 aaPredicted RBP15.52■□□□□ 0.08
KCNMA1-292ENST00000640934 PABPN1Q86U42 306 aaKnown RBP eCLIP15.41■□□□□ 0.06
KCNMA1-292ENST00000640934 TOP2AP11388 1531 aaKnown RBP15.36■□□□□ 0.05
KCNMA1-292ENST00000640934 TTBK1Q5TCY1 1321 aaPredicted RBP15.35■□□□□ 0.05
KCNMA1-292ENST00000640934 SMARCA4P51532 1647 aa15.34■□□□□ 0.05
KCNMA1-292ENST00000640934 CCDC88BA6NC98 1476 aa15.34■□□□□ 0.05
KCNMA1-292ENST00000640934 ABCC8Q09428 1581 aa15.31■□□□□ 0.04
KCNMA1-292ENST00000640934 UBTFP17480 764 aaKnown RBP15.3■□□□□ 0.04
KCNMA1-292ENST00000640934 CCER1Q8TC90 406 aaPredicted RBP15.29■□□□□ 0.04
KCNMA1-292ENST00000640934 SMARCA2P51531 1590 aa15.25■□□□□ 0.03
KCNMA1-292ENST00000640934 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.25■□□□□ 0.03
KCNMA1-292ENST00000640934 EIF4G1Q04637 1599 aaKnown RBP15.23■□□□□ 0.03
KCNMA1-292ENST00000640934 CSRNP3Q8WYN3 585 aa15.23■□□□□ 0.03
KCNMA1-292ENST00000640934 SOGA1O94964 1423 aa15.2■□□□□ 0.02
KCNMA1-292ENST00000640934 UNC13AQ9UPW8 1703 aa15.19■□□□□ 0.02
KCNMA1-292ENST00000640934 CEP162Q5TB80 1403 aa15.17■□□□□ 0.02
KCNMA1-292ENST00000640934 EEA1Q15075 1411 aa15.15■□□□□ 0.02
KCNMA1-292ENST00000640934 GTF3C3Q9Y5Q9 886 aa15.14■□□□□ 0.01
KCNMA1-292ENST00000640934 TNIKQ9UKE5 1360 aa15.13■□□□□ 0.01
KCNMA1-292ENST00000640934 NEUROD1Q13562 356 aa15.13■□□□□ 0.01
KCNMA1-292ENST00000640934 WRNQ14191 1432 aaPredicted RBP eCLIP15.11■□□□□ 0.01
KCNMA1-292ENST00000640934 ACIN1Q9UKV3 1341 aaKnown RBP15.11■□□□□ 0.01
KCNMA1-292ENST00000640934 RUSC2Q8N2Y8 1516 aa15.09■□□□□ 0.01
KCNMA1-292ENST00000640934 BICRAQ9NZM4 1560 aa15.07■□□□□ 0
KCNMA1-292ENST00000640934 GOLGA3Q08378 1498 aa15.06■□□□□ 0
KCNMA1-292ENST00000640934 RANGAP1P46060 587 aaPredicted RBP15.06■□□□□ 0
KCNMA1-292ENST00000640934 APLP2Q06481 763 aa15.04■□□□□ -0
KCNMA1-292ENST00000640934 BAZ1BQ9UIG0 1483 aaKnown RBP15.03■□□□□ -0
KCNMA1-292ENST00000640934 ATAD2BQ9ULI0 1458 aa15□□□□□ -0.01
KCNMA1-292ENST00000640934 CEP164Q9UPV0 1460 aa14.97□□□□□ -0.01
KCNMA1-292ENST00000640934 PEG3Q9GZU2 1588 aa14.96□□□□□ -0.02
KCNMA1-292ENST00000640934 HNRNPUL2Q1KMD3 747 aaKnown RBP14.95□□□□□ -0.02
KCNMA1-292ENST00000640934 CLIP1P30622 1438 aa14.93□□□□□ -0.02
KCNMA1-292ENST00000640934 DIEXFQ68CQ4 756 aaKnown RBP14.92□□□□□ -0.02
KCNMA1-292ENST00000640934 CENPBP07199 599 aaPredicted RBP14.92□□□□□ -0.02
KCNMA1-292ENST00000640934 SYNJ1O43426 1573 aa14.91□□□□□ -0.02
KCNMA1-292ENST00000640934 KIF21BO75037 1637 aa14.82□□□□□ -0.04
KCNMA1-292ENST00000640934 RAPGEF2Q9Y4G8 1499 aa14.82□□□□□ -0.04
KCNMA1-292ENST00000640934 VPS8Q8N3P4 1428 aa14.81□□□□□ -0.04
KCNMA1-292ENST00000640934 BCL11AQ9H165 835 aa14.8□□□□□ -0.04
KCNMA1-292ENST00000640934 YTHDC1Q96MU7 727 aaKnown RBP14.8□□□□□ -0.04
KCNMA1-292ENST00000640934 ZNF316A6NFI3 1004 aaPredicted RBP14.79□□□□□ -0.04
KCNMA1-292ENST00000640934 TOP2BQ02880 1626 aa14.72□□□□□ -0.05
KCNMA1-292ENST00000640934 NCAPD3P42695 1498 aa14.68□□□□□ -0.06
KCNMA1-292ENST00000640934 KIF27Q86VH2 1401 aa14.68□□□□□ -0.06
KCNMA1-292ENST00000640934 HMGXB3Q12766 1538 aa14.64□□□□□ -0.07
KCNMA1-292ENST00000640934 BIVM-ERCC5R4GMW8 1640 aa14.62□□□□□ -0.07
KCNMA1-292ENST00000640934 PRXQ9BXM0 1461 aa14.62□□□□□ -0.07
KCNMA1-292ENST00000640934 ITGAEP38570 1179 aa14.61□□□□□ -0.07
KCNMA1-292ENST00000640934 ERICH3Q5RHP9 1530 aa14.61□□□□□ -0.07
KCNMA1-292ENST00000640934 CUX1P39880 1505 aa14.6□□□□□ -0.07
KCNMA1-292ENST00000640934 KANK4Q5T7N3 995 aaPredicted RBP14.6□□□□□ -0.07
KCNMA1-292ENST00000640934 CFTRP13569 1480 aa14.57□□□□□ -0.08
KCNMA1-292ENST00000640934 ARAP1Q96P48 1450 aa14.56□□□□□ -0.08
KCNMA1-292ENST00000640934 MIER1Q8N108 512 aa14.55□□□□□ -0.08
KCNMA1-292ENST00000640934 ATP1B4Q9UN42 357 aaPredicted RBP14.55□□□□□ -0.08
KCNMA1-292ENST00000640934 CUX2O14529 1486 aa14.53□□□□□ -0.08
KCNMA1-292ENST00000640934 CLSPNQ9HAW4 1339 aa14.49□□□□□ -0.09
KCNMA1-292ENST00000640934 CADPSQ9ULU8 1353 aa14.49□□□□□ -0.09
KCNMA1-292ENST00000640934 PRKCSHP14314 528 aaPredicted RBP14.48□□□□□ -0.09
KCNMA1-292ENST00000640934 ANP32EQ9BTT0 268 aa14.47□□□□□ -0.09
KCNMA1-292ENST00000640934 DHX57Q6P158 1386 aaKnown RBP14.47□□□□□ -0.09
KCNMA1-292ENST00000640934 P3H3Q8IVL6 736 aa14.46□□□□□ -0.09
KCNMA1-292ENST00000640934 CARMIL1Q5VZK9 1371 aa14.46□□□□□ -0.09
KCNMA1-292ENST00000640934 CCNB3Q8WWL7 1395 aa14.46□□□□□ -0.09
KCNMA1-292ENST00000640934 IGF1RP08069 1367 aa14.46□□□□□ -0.1
KCNMA1-292ENST00000640934 ARHGAP35Q9NRY4 1499 aa14.45□□□□□ -0.1
KCNMA1-292ENST00000640934 FAM50AQ14320 339 aaKnown RBP14.43□□□□□ -0.1
KCNMA1-292ENST00000640934 RRBP1Q9P2E9 1410 aaKnown RBP14.41□□□□□ -0.1
KCNMA1-292ENST00000640934 FGD5Q6ZNL6 1462 aa14.41□□□□□ -0.1
KCNMA1-292ENST00000640934 FANCD2Q9BXW9 1451 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms