RNA–Protein interactions for RNA: ENST00000640834.1

KCNMA1-291, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-291ENST00000640834 NISCHQ9Y2I1 1504 aa28.09■■■□□ 2.09
KCNMA1-291ENST00000640834 CCDC180Q9P1Z9 1646 aa23.98■■□□□ 1.43
KCNMA1-291ENST00000640834 ZCCHC6Q5VYS8 1495 aaKnown RBP23.8■■□□□ 1.4
KCNMA1-291ENST00000640834 SHROOM4Q9ULL8 1493 aa23.74■■□□□ 1.39
KCNMA1-291ENST00000640834 SUPT5HO00267 1087 aaKnown RBP23.39■■□□□ 1.34
KCNMA1-291ENST00000640834 DCAF1Q9Y4B6 1507 aa23.21■■□□□ 1.31
KCNMA1-291ENST00000640834 DCAF8L2P0C7V8 631 aa23.01■■□□□ 1.27
KCNMA1-291ENST00000640834 CHIC1Q5VXU3 224 aa22.9■■□□□ 1.26
KCNMA1-291ENST00000640834 MYO15BQ96JP2 1530 aa22.72■■□□□ 1.23
KCNMA1-291ENST00000640834 ABCC9O60706 1549 aa22.49■■□□□ 1.19
KCNMA1-291ENST00000640834 HRCP23327 699 aa22.44■■□□□ 1.18
KCNMA1-291ENST00000640834 SCRIBQ14160 1630 aa22.25■■□□□ 1.15
KCNMA1-291ENST00000640834 PCGF6Q9BYE7 350 aa22.22■■□□□ 1.15
KCNMA1-291ENST00000640834 RSF1Q96T23 1441 aaPredicted RBP22.21■■□□□ 1.15
KCNMA1-291ENST00000640834 NACADO15069 1562 aa22.12■■□□□ 1.13
KCNMA1-291ENST00000640834 RB1CC1Q8TDY2 1594 aa22.09■■□□□ 1.13
KCNMA1-291ENST00000640834 LOC105371045A0A1W2PR82 267 aa22.07■■□□□ 1.12
KCNMA1-291ENST00000640834 TRIM26Q12899 539 aaPredicted RBP21.96■■□□□ 1.11
KCNMA1-291ENST00000640834 TRIM41Q8WV44 630 aa21.92■■□□□ 1.1
KCNMA1-291ENST00000640834 CECR2Q9BXF3 1484 aa21.75■■□□□ 1.07
KCNMA1-291ENST00000640834 MROH2BQ7Z745 1585 aa21.75■■□□□ 1.07
KCNMA1-291ENST00000640834 ZEB1P37275 1124 aaPredicted RBP21.7■■□□□ 1.06
KCNMA1-291ENST00000640834 PPARGC1BQ86YN6 1023 aaKnown RBP21.69■■□□□ 1.06
KCNMA1-291ENST00000640834 BAZ1AQ9NRL2 1556 aaPredicted RBP21.65■■□□□ 1.06
KCNMA1-291ENST00000640834 WIZO95785 1651 aa21.63■■□□□ 1.05
KCNMA1-291ENST00000640834 FAM9AQ8IZU1 332 aaPredicted RBP21.56■■□□□ 1.04
KCNMA1-291ENST00000640834 EIF4G1Q04637 1599 aaKnown RBP21.47■■□□□ 1.03
KCNMA1-291ENST00000640834 TOP2AP11388 1531 aaKnown RBP21.44■■□□□ 1.02
KCNMA1-291ENST00000640834 SMARCA4P51532 1647 aa21.37■■□□□ 1.01
KCNMA1-291ENST00000640834 SMARCA2P51531 1590 aa21.26■□□□□ 0.99
KCNMA1-291ENST00000640834 CCDC88BA6NC98 1476 aa21.24■□□□□ 0.99
KCNMA1-291ENST00000640834 UNC13AQ9UPW8 1703 aa21.23■□□□□ 0.99
KCNMA1-291ENST00000640834 EHMT2Q96KQ7 1210 aa21.23■□□□□ 0.99
KCNMA1-291ENST00000640834 EEA1Q15075 1411 aa21.19■□□□□ 0.98
KCNMA1-291ENST00000640834 WRNQ14191 1432 aaPredicted RBP eCLIP21.14■□□□□ 0.98
KCNMA1-291ENST00000640834 ABCC8Q09428 1581 aa21.13■□□□□ 0.97
KCNMA1-291ENST00000640834 TNIKQ9UKE5 1360 aa21.07■□□□□ 0.96
KCNMA1-291ENST00000640834 PEG3Q9GZU2 1588 aa21.04■□□□□ 0.96
KCNMA1-291ENST00000640834 CEP162Q5TB80 1403 aa21.02■□□□□ 0.96
KCNMA1-291ENST00000640834 BICRAQ9NZM4 1560 aa20.98■□□□□ 0.95
KCNMA1-291ENST00000640834 CSRNP3Q8WYN3 585 aa20.98■□□□□ 0.95
KCNMA1-291ENST00000640834 SOGA1O94964 1423 aa20.97■□□□□ 0.95
KCNMA1-291ENST00000640834 CCER1Q8TC90 406 aaPredicted RBP20.95■□□□□ 0.94
KCNMA1-291ENST00000640834 GOLGA3Q08378 1498 aa20.94■□□□□ 0.94
KCNMA1-291ENST00000640834 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.86■□□□□ 0.93
KCNMA1-291ENST00000640834 UBTFP17480 764 aaKnown RBP20.85■□□□□ 0.93
KCNMA1-291ENST00000640834 CEP164Q9UPV0 1460 aa20.82■□□□□ 0.92
KCNMA1-291ENST00000640834 PABPN1Q86U42 306 aaKnown RBP eCLIP20.82■□□□□ 0.92
KCNMA1-291ENST00000640834 RUSC2Q8N2Y8 1516 aa20.81■□□□□ 0.92
KCNMA1-291ENST00000640834 KIF21BO75037 1637 aa20.81■□□□□ 0.92
KCNMA1-291ENST00000640834 ATAD2BQ9ULI0 1458 aa20.77■□□□□ 0.92
KCNMA1-291ENST00000640834 BAZ1BQ9UIG0 1483 aaKnown RBP20.75■□□□□ 0.91
KCNMA1-291ENST00000640834 SYNJ1O43426 1573 aa20.73■□□□□ 0.91
KCNMA1-291ENST00000640834 PELP1Q8IZL8 1130 aaKnown RBP20.7■□□□□ 0.9
KCNMA1-291ENST00000640834 CLIP1P30622 1438 aa20.64■□□□□ 0.9
KCNMA1-291ENST00000640834 TTBK1Q5TCY1 1321 aaPredicted RBP20.62■□□□□ 0.89
KCNMA1-291ENST00000640834 SCAF1Q9H7N4 1312 aaKnown RBP20.61■□□□□ 0.89
KCNMA1-291ENST00000640834 VPS8Q8N3P4 1428 aa20.6■□□□□ 0.89
KCNMA1-291ENST00000640834 DIEXFQ68CQ4 756 aaKnown RBP20.6■□□□□ 0.89
KCNMA1-291ENST00000640834 TOP2BQ02880 1626 aa20.57■□□□□ 0.88
KCNMA1-291ENST00000640834 APLP2Q06481 763 aa20.55■□□□□ 0.88
KCNMA1-291ENST00000640834 CENPBP07199 599 aaPredicted RBP20.53■□□□□ 0.88
KCNMA1-291ENST00000640834 ACIN1Q9UKV3 1341 aaKnown RBP20.52■□□□□ 0.88
KCNMA1-291ENST00000640834 BIVM-ERCC5R4GMW8 1640 aa20.52■□□□□ 0.88
KCNMA1-291ENST00000640834 RAPGEF2Q9Y4G8 1499 aa20.49■□□□□ 0.87
KCNMA1-291ENST00000640834 ZNF316A6NFI3 1004 aaPredicted RBP20.48■□□□□ 0.87
KCNMA1-291ENST00000640834 ERICH3Q5RHP9 1530 aa20.48■□□□□ 0.87
KCNMA1-291ENST00000640834 HMGXB3Q12766 1538 aa20.47■□□□□ 0.87
KCNMA1-291ENST00000640834 NCAPD3P42695 1498 aa20.41■□□□□ 0.86
KCNMA1-291ENST00000640834 PRXQ9BXM0 1461 aa20.38■□□□□ 0.85
KCNMA1-291ENST00000640834 HNRNPUL2Q1KMD3 747 aaKnown RBP20.37■□□□□ 0.85
KCNMA1-291ENST00000640834 NEUROD1Q13562 356 aa20.36■□□□□ 0.85
KCNMA1-291ENST00000640834 CLSPNQ9HAW4 1339 aa20.31■□□□□ 0.84
KCNMA1-291ENST00000640834 KIF27Q86VH2 1401 aa20.31■□□□□ 0.84
KCNMA1-291ENST00000640834 CUX1P39880 1505 aa20.26■□□□□ 0.83
KCNMA1-291ENST00000640834 ARAP1Q96P48 1450 aa20.26■□□□□ 0.83
KCNMA1-291ENST00000640834 CFTRP13569 1480 aa20.25■□□□□ 0.83
KCNMA1-291ENST00000640834 GTF3C3Q9Y5Q9 886 aa20.2■□□□□ 0.82
KCNMA1-291ENST00000640834 RANGAP1P46060 587 aaPredicted RBP20.19■□□□□ 0.82
KCNMA1-291ENST00000640834 PRDM2Q13029 1718 aa20.18■□□□□ 0.82
KCNMA1-291ENST00000640834 RRBP1Q9P2E9 1410 aaKnown RBP20.14■□□□□ 0.82
KCNMA1-291ENST00000640834 DHX57Q6P158 1386 aaKnown RBP20.1■□□□□ 0.81
KCNMA1-291ENST00000640834 CUX2O14529 1486 aa20.08■□□□□ 0.8
KCNMA1-291ENST00000640834 ARHGAP35Q9NRY4 1499 aa20.07■□□□□ 0.8
KCNMA1-291ENST00000640834 MIER1Q8N108 512 aa20.06■□□□□ 0.8
KCNMA1-291ENST00000640834 KANK4Q5T7N3 995 aaPredicted RBP20.05■□□□□ 0.8
KCNMA1-291ENST00000640834 MAP3K1Q13233 1512 aa20.04■□□□□ 0.8
KCNMA1-291ENST00000640834 CCNB3Q8WWL7 1395 aa20.03■□□□□ 0.8
KCNMA1-291ENST00000640834 CADPSQ9ULU8 1353 aa20■□□□□ 0.79
KCNMA1-291ENST00000640834 IGF1RP08069 1367 aa19.98■□□□□ 0.79
KCNMA1-291ENST00000640834 YTHDC1Q96MU7 727 aaKnown RBP19.97■□□□□ 0.79
KCNMA1-291ENST00000640834 TIAM1Q13009 1591 aa19.93■□□□□ 0.78
KCNMA1-291ENST00000640834 CARMIL1Q5VZK9 1371 aa19.93■□□□□ 0.78
KCNMA1-291ENST00000640834 FGD5Q6ZNL6 1462 aa19.91■□□□□ 0.78
KCNMA1-291ENST00000640834 FHAD1B1AJZ9 1412 aa19.91■□□□□ 0.78
KCNMA1-291ENST00000640834 LRRC9Q6ZRR7 1453 aa19.84■□□□□ 0.77
KCNMA1-291ENST00000640834 CFAP43Q8NDM7 1665 aa19.81■□□□□ 0.76
KCNMA1-291ENST00000640834 RAB3GAP2Q9H2M9 1393 aa19.8■□□□□ 0.76
KCNMA1-291ENST00000640834 SETD5Q9C0A6 1442 aa19.79■□□□□ 0.76
KCNMA1-291ENST00000640834 EFCAB5A4FU69 1503 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 224.1 ms