RNA–Protein interactions for RNA: ENST00000640368.1

PAX6-270, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PAX6, Length 6,975 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-270ENST00000640368 DCAF8L2P0C7V8 631 aa14.82□□□□□ -0.04
PAX6-270ENST00000640368 EHMT2Q96KQ7 1210 aa14.26□□□□□ -0.13
PAX6-270ENST00000640368 SUPT5HO00267 1087 aaKnown RBP13.77□□□□□ -0.21
PAX6-270ENST00000640368 TTBK1Q5TCY1 1321 aaPredicted RBP13.71□□□□□ -0.22
PAX6-270ENST00000640368 PELP1Q8IZL8 1130 aaKnown RBP13.66□□□□□ -0.22
PAX6-270ENST00000640368 SHROOM4Q9ULL8 1493 aa13.46□□□□□ -0.26
PAX6-270ENST00000640368 RANGAP1P46060 587 aaPredicted RBP13.42□□□□□ -0.26
PAX6-270ENST00000640368 ERICH6Q7L0X2 663 aa13.41□□□□□ -0.26
PAX6-270ENST00000640368 APLP2Q06481 763 aa13.4□□□□□ -0.27
PAX6-270ENST00000640368 MYT1Q01538 1121 aa13.37□□□□□ -0.27
PAX6-270ENST00000640368 FAM9AQ8IZU1 332 aaPredicted RBP13.34□□□□□ -0.27
PAX6-270ENST00000640368 ATP1B4Q9UN42 357 aaPredicted RBP13.23□□□□□ -0.29
PAX6-270ENST00000640368 PCGF6Q9BYE7 350 aa13.14□□□□□ -0.31
PAX6-270ENST00000640368 NISCHQ9Y2I1 1504 aa13.12□□□□□ -0.31
PAX6-270ENST00000640368 CCER1Q8TC90 406 aaPredicted RBP13.1□□□□□ -0.31
PAX6-270ENST00000640368 YTHDC1Q96MU7 727 aaKnown RBP13.1□□□□□ -0.31
PAX6-270ENST00000640368 CNGB1Q14028 1251 aaPredicted RBP13□□□□□ -0.33
PAX6-270ENST00000640368 CHIC1Q5VXU3 224 aa12.99□□□□□ -0.33
PAX6-270ENST00000640368 MYT1LQ9UL68 1186 aa12.94□□□□□ -0.34
PAX6-270ENST00000640368 CENPBP07199 599 aaPredicted RBP12.92□□□□□ -0.34
PAX6-270ENST00000640368 POLR3GLQ9BT43 218 aa12.88□□□□□ -0.35
PAX6-270ENST00000640368 PPARGC1BQ86YN6 1023 aaKnown RBP12.87□□□□□ -0.35
PAX6-270ENST00000640368 NEFLP07196 543 aa12.82□□□□□ -0.36
PAX6-270ENST00000640368 DAXXQ9UER7 740 aaPredicted RBP12.76□□□□□ -0.37
PAX6-270ENST00000640368 SLC4A1APQ9BWU0 796 aaKnown RBP12.73□□□□□ -0.37
PAX6-270ENST00000640368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.63□□□□□ -0.39
PAX6-270ENST00000640368 UBTFP17480 764 aaKnown RBP12.63□□□□□ -0.39
PAX6-270ENST00000640368 HNRNPUL2Q1KMD3 747 aaKnown RBP12.63□□□□□ -0.39
PAX6-270ENST00000640368 BCL11AQ9H165 835 aa12.63□□□□□ -0.39
PAX6-270ENST00000640368 ITGAEP38570 1179 aa12.62□□□□□ -0.39
PAX6-270ENST00000640368 TRIM41Q8WV44 630 aa12.48□□□□□ -0.41
PAX6-270ENST00000640368 ZEB1P37275 1124 aaPredicted RBP12.47□□□□□ -0.41
PAX6-270ENST00000640368 CLSPNQ9HAW4 1339 aa12.45□□□□□ -0.42
PAX6-270ENST00000640368 SLC24A1O60721 1099 aa12.44□□□□□ -0.42
PAX6-270ENST00000640368 ZNF316A6NFI3 1004 aaPredicted RBP12.44□□□□□ -0.42
PAX6-270ENST00000640368 RTL5Q5HYW3 569 aaPredicted RBP12.29□□□□□ -0.44
PAX6-270ENST00000640368 BCANQ96GW7 911 aa12.28□□□□□ -0.44
PAX6-270ENST00000640368 PLPPR3Q6T4P5 718 aa12.21□□□□□ -0.46
PAX6-270ENST00000640368 ZBTB47Q9UFB7 747 aaPredicted RBP12.2□□□□□ -0.46
PAX6-270ENST00000640368 HRCP23327 699 aa12.15□□□□□ -0.46
PAX6-270ENST00000640368 ZNF326Q5BKZ1 582 aaKnown RBP12.1□□□□□ -0.47
PAX6-270ENST00000640368 EIF5BO60841 1220 aaKnown RBP12.08□□□□□ -0.48
PAX6-270ENST00000640368 TRIM52Q96A61 297 aa12.08□□□□□ -0.48
PAX6-270ENST00000640368 NEUROD1Q13562 356 aa12.06□□□□□ -0.48
PAX6-270ENST00000640368 CANXP27824 592 aaKnown RBP12.05□□□□□ -0.48
PAX6-270ENST00000640368 FAM50AQ14320 339 aaKnown RBP12.04□□□□□ -0.48
PAX6-270ENST00000640368 LOC105371045A0A1W2PR82 267 aa12□□□□□ -0.49
PAX6-270ENST00000640368 NPM2Q86SE8 214 aaKnown RBP11.99□□□□□ -0.49
PAX6-270ENST00000640368 GTF3C3Q9Y5Q9 886 aa11.98□□□□□ -0.49
PAX6-270ENST00000640368 ARXQ96QS3 562 aa11.97□□□□□ -0.49
PAX6-270ENST00000640368 PLEKHG5O94827 1062 aa11.97□□□□□ -0.49
PAX6-270ENST00000640368 FBLN2P98095 1184 aa11.95□□□□□ -0.5
PAX6-270ENST00000640368 ARID3CA6NKF2 412 aa11.94□□□□□ -0.5
PAX6-270ENST00000640368 A0A0G2JS52 829 aa11.94□□□□□ -0.5
PAX6-270ENST00000640368 TRIM26Q12899 539 aaPredicted RBP11.93□□□□□ -0.5
PAX6-270ENST00000640368 NEFMP07197 916 aa11.93□□□□□ -0.5
PAX6-270ENST00000640368 SENP3Q9H4L4 574 aaPredicted RBP11.93□□□□□ -0.5
PAX6-270ENST00000640368 SCAF1Q9H7N4 1312 aaKnown RBP11.9□□□□□ -0.5
PAX6-270ENST00000640368 DIEXFQ68CQ4 756 aaKnown RBP11.89□□□□□ -0.51
PAX6-270ENST00000640368 TULP1O00294 542 aaPredicted RBP11.87□□□□□ -0.51
PAX6-270ENST00000640368 CDK11AQ9UQ88 783 aaPredicted RBP11.83□□□□□ -0.52
PAX6-270ENST00000640368 ESF1Q9H501 851 aaKnown RBP11.82□□□□□ -0.52
PAX6-270ENST00000640368 SALL2Q9Y467 1007 aaPredicted RBP11.8□□□□□ -0.52
PAX6-270ENST00000640368 GLIPR1L2Q4G1C9 344 aa11.78□□□□□ -0.52
PAX6-270ENST00000640368 STAG3Q9UJ98 1225 aa11.78□□□□□ -0.52
PAX6-270ENST00000640368 HSP90AA1P07900 732 aaKnown RBP11.77□□□□□ -0.52
PAX6-270ENST00000640368 CHGAP10645 457 aaKnown RBP11.76□□□□□ -0.53
PAX6-270ENST00000640368 CDK11BP21127 795 aaKnown RBP11.76□□□□□ -0.53
PAX6-270ENST00000640368 ZBTB7CA1YPR0 619 aa11.76□□□□□ -0.53
PAX6-270ENST00000640368 NCBP3Q53F19 620 aaKnown RBP11.76□□□□□ -0.53
PAX6-270ENST00000640368 TPRNQ4KMQ1 711 aa11.75□□□□□ -0.53
PAX6-270ENST00000640368 ANP32CO43423 234 aa11.75□□□□□ -0.53
PAX6-270ENST00000640368 ANP32BQ92688 251 aaKnown RBP11.73□□□□□ -0.53
PAX6-270ENST00000640368 ZNF777Q9ULD5 760 aaPredicted RBP11.71□□□□□ -0.54
PAX6-270ENST00000640368 TAOK2Q9UL54 1235 aa11.7□□□□□ -0.54
PAX6-270ENST00000640368 NBR1Q14596 966 aa11.7□□□□□ -0.54
PAX6-270ENST00000640368 P3H3Q8IVL6 736 aa11.68□□□□□ -0.54
PAX6-270ENST00000640368 ANP32AP39687 249 aaKnown RBP11.66□□□□□ -0.54
PAX6-270ENST00000640368 SENP3-EIF4A1A0A087X0R7 540 aa11.64□□□□□ -0.55
PAX6-270ENST00000640368 C14orf37Q86TY3 774 aa11.6□□□□□ -0.55
PAX6-270ENST00000640368 ACIN1Q9UKV3 1341 aaKnown RBP11.6□□□□□ -0.55
PAX6-270ENST00000640368 PABPN1Q86U42 306 aaKnown RBP eCLIP11.58□□□□□ -0.56
PAX6-270ENST00000640368 AMER1Q5JTC6 1135 aaPredicted RBP11.56□□□□□ -0.56
PAX6-270ENST00000640368 DCAF1Q9Y4B6 1507 aa11.56□□□□□ -0.56
PAX6-270ENST00000640368 UPF2Q9HAU5 1272 aaKnown RBP11.54□□□□□ -0.56
PAX6-270ENST00000640368 IRX6P78412 446 aaPredicted RBP11.53□□□□□ -0.56
PAX6-270ENST00000640368 HAP1P54257 671 aaPredicted RBP11.53□□□□□ -0.56
PAX6-270ENST00000640368 FAM9BQ8IZU0 186 aa11.53□□□□□ -0.56
PAX6-270ENST00000640368 FKBP8Q14318 412 aa11.51□□□□□ -0.57
PAX6-270ENST00000640368 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.5□□□□□ -0.57
PAX6-270ENST00000640368 NPHP1O15259 732 aa11.47□□□□□ -0.57
PAX6-270ENST00000640368 NPM1P06748 294 aaKnown RBP eCLIP11.45□□□□□ -0.58
PAX6-270ENST00000640368 RTN4Q9NQC3 1192 aaKnown RBP11.45□□□□□ -0.58
PAX6-270ENST00000640368 CLSTN1O94985 981 aa11.44□□□□□ -0.58
PAX6-270ENST00000640368 MYH16Q9H6N6 1097 aa11.4□□□□□ -0.58
PAX6-270ENST00000640368 HIRIP3Q9BW71 556 aaPredicted RBP11.4□□□□□ -0.58
PAX6-270ENST00000640368 NCLP19338 710 aaKnown RBP11.4□□□□□ -0.59
PAX6-270ENST00000640368 KDM2AQ9Y2K7 1162 aa11.39□□□□□ -0.59
PAX6-270ENST00000640368 HNRNPUQ00839 825 aaKnown RBP eCLIP11.39□□□□□ -0.59
PAX6-270ENST00000640368 WDR43Q15061 677 aaKnown RBP eCLIP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms