RNA–Protein interactions for RNA: ENST00000639968.1

KCNMA1-274, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 4,126 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-274ENST00000639968 NISCHQ9Y2I1 1504 aa26.7■■□□□ 1.86
KCNMA1-274ENST00000639968 DCAF8L2P0C7V8 631 aa26.31■■□□□ 1.8
KCNMA1-274ENST00000639968 SUPT5HO00267 1087 aaKnown RBP25.42■■□□□ 1.66
KCNMA1-274ENST00000639968 SHROOM4Q9ULL8 1493 aa25.36■■□□□ 1.65
KCNMA1-274ENST00000639968 EHMT2Q96KQ7 1210 aa24.42■■□□□ 1.5
KCNMA1-274ENST00000639968 FAM9AQ8IZU1 332 aaPredicted RBP23.9■■□□□ 1.42
KCNMA1-274ENST00000639968 PCGF6Q9BYE7 350 aa23.69■■□□□ 1.38
KCNMA1-274ENST00000639968 TTBK1Q5TCY1 1321 aaPredicted RBP23.52■■□□□ 1.36
KCNMA1-274ENST00000639968 TRIM41Q8WV44 630 aa23.34■■□□□ 1.33
KCNMA1-274ENST00000639968 RANGAP1P46060 587 aaPredicted RBP23.18■■□□□ 1.3
KCNMA1-274ENST00000639968 LOC105371045A0A1W2PR82 267 aa23.13■■□□□ 1.29
KCNMA1-274ENST00000639968 CHIC1Q5VXU3 224 aa23.12■■□□□ 1.29
KCNMA1-274ENST00000639968 PPARGC1BQ86YN6 1023 aaKnown RBP23.1■■□□□ 1.29
KCNMA1-274ENST00000639968 APLP2Q06481 763 aa22.94■■□□□ 1.26
KCNMA1-274ENST00000639968 UBTFP17480 764 aaKnown RBP22.83■■□□□ 1.24
KCNMA1-274ENST00000639968 CCER1Q8TC90 406 aaPredicted RBP22.74■■□□□ 1.23
KCNMA1-274ENST00000639968 ABCC9O60706 1549 aa22.63■■□□□ 1.21
KCNMA1-274ENST00000639968 HRCP23327 699 aa22.59■■□□□ 1.21
KCNMA1-274ENST00000639968 TRIM26Q12899 539 aaPredicted RBP22.56■■□□□ 1.2
KCNMA1-274ENST00000639968 ATP1B4Q9UN42 357 aaPredicted RBP22.54■■□□□ 1.2
KCNMA1-274ENST00000639968 PABPN1Q86U42 306 aaKnown RBP eCLIP22.46■■□□□ 1.19
KCNMA1-274ENST00000639968 ZEB1P37275 1124 aaPredicted RBP22.44■■□□□ 1.18
KCNMA1-274ENST00000639968 YTHDC1Q96MU7 727 aaKnown RBP22.23■■□□□ 1.15
KCNMA1-274ENST00000639968 ZCCHC6Q5VYS8 1495 aaKnown RBP22.2■■□□□ 1.14
KCNMA1-274ENST00000639968 HNRNPUL2Q1KMD3 747 aaKnown RBP22.2■■□□□ 1.14
KCNMA1-274ENST00000639968 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.19■■□□□ 1.14
KCNMA1-274ENST00000639968 ITGAEP38570 1179 aa22.17■■□□□ 1.14
KCNMA1-274ENST00000639968 CENPBP07199 599 aaPredicted RBP22.06■■□□□ 1.12
KCNMA1-274ENST00000639968 SCRIBQ14160 1630 aa21.93■■□□□ 1.1
KCNMA1-274ENST00000639968 PELP1Q8IZL8 1130 aaKnown RBP21.84■■□□□ 1.09
KCNMA1-274ENST00000639968 MYO15BQ96JP2 1530 aa21.81■■□□□ 1.08
KCNMA1-274ENST00000639968 CCDC180Q9P1Z9 1646 aa21.69■■□□□ 1.06
KCNMA1-274ENST00000639968 DIEXFQ68CQ4 756 aaKnown RBP21.64■■□□□ 1.06
KCNMA1-274ENST00000639968 CSRNP3Q8WYN3 585 aa21.64■■□□□ 1.05
KCNMA1-274ENST00000639968 CNGB1Q14028 1251 aaPredicted RBP21.56■■□□□ 1.04
KCNMA1-274ENST00000639968 FAM50AQ14320 339 aaKnown RBP21.53■■□□□ 1.04
KCNMA1-274ENST00000639968 RSF1Q96T23 1441 aaPredicted RBP21.5■■□□□ 1.03
KCNMA1-274ENST00000639968 P3H3Q8IVL6 736 aa21.49■■□□□ 1.03
KCNMA1-274ENST00000639968 POLR3GLQ9BT43 218 aa21.45■■□□□ 1.02
KCNMA1-274ENST00000639968 NEUROD1Q13562 356 aa21.41■■□□□ 1.02
KCNMA1-274ENST00000639968 DCAF1Q9Y4B6 1507 aa21.37■■□□□ 1.01
KCNMA1-274ENST00000639968 NEFLP07196 543 aa21.35■■□□□ 1.01
KCNMA1-274ENST00000639968 ARID3CA6NKF2 412 aa21.34■■□□□ 1.01
KCNMA1-274ENST00000639968 CECR2Q9BXF3 1484 aa21.26■□□□□ 0.99
KCNMA1-274ENST00000639968 GTF3C3Q9Y5Q9 886 aa21.23■□□□□ 0.99
KCNMA1-274ENST00000639968 ZNF316A6NFI3 1004 aaPredicted RBP21.19■□□□□ 0.98
KCNMA1-274ENST00000639968 TRIM52Q96A61 297 aa21.19■□□□□ 0.98
KCNMA1-274ENST00000639968 MYT1LQ9UL68 1186 aa21.19■□□□□ 0.98
KCNMA1-274ENST00000639968 FBLN2P98095 1184 aa21.17■□□□□ 0.98
KCNMA1-274ENST00000639968 ERICH6Q7L0X2 663 aa21.12■□□□□ 0.97
KCNMA1-274ENST00000639968 BCANQ96GW7 911 aa21.03■□□□□ 0.96
KCNMA1-274ENST00000639968 ZNF326Q5BKZ1 582 aaKnown RBP21.01■□□□□ 0.95
KCNMA1-274ENST00000639968 RB1CC1Q8TDY2 1594 aa20.99■□□□□ 0.95
KCNMA1-274ENST00000639968 ACIN1Q9UKV3 1341 aaKnown RBP20.97■□□□□ 0.95
KCNMA1-274ENST00000639968 NACADO15069 1562 aa20.94■□□□□ 0.94
KCNMA1-274ENST00000639968 CEP162Q5TB80 1403 aa20.94■□□□□ 0.94
KCNMA1-274ENST00000639968 CLIP1P30622 1438 aa20.91■□□□□ 0.94
KCNMA1-274ENST00000639968 MROH2BQ7Z745 1585 aa20.91■□□□□ 0.94
KCNMA1-274ENST00000639968 WRNQ14191 1432 aaPredicted RBP eCLIP20.86■□□□□ 0.93
KCNMA1-274ENST00000639968 SOGA1O94964 1423 aa20.85■□□□□ 0.93
KCNMA1-274ENST00000639968 ZNF777Q9ULD5 760 aaPredicted RBP20.85■□□□□ 0.93
KCNMA1-274ENST00000639968 HIRIP3Q9BW71 556 aaPredicted RBP20.82■□□□□ 0.92
KCNMA1-274ENST00000639968 CHIC2Q9UKJ5 165 aa20.81■□□□□ 0.92
KCNMA1-274ENST00000639968 ANP32CO43423 234 aa20.79■□□□□ 0.92
KCNMA1-274ENST00000639968 DDX10Q13206 875 aaKnown RBP20.77■□□□□ 0.92
KCNMA1-274ENST00000639968 MIER1Q8N108 512 aa20.77■□□□□ 0.92
KCNMA1-274ENST00000639968 BAZ1AQ9NRL2 1556 aaPredicted RBP20.74■□□□□ 0.91
KCNMA1-274ENST00000639968 SCAF1Q9H7N4 1312 aaKnown RBP20.74■□□□□ 0.91
KCNMA1-274ENST00000639968 BAZ1BQ9UIG0 1483 aaKnown RBP20.73■□□□□ 0.91
KCNMA1-274ENST00000639968 ABCC8Q09428 1581 aa20.73■□□□□ 0.91
KCNMA1-274ENST00000639968 SLC4A1APQ9BWU0 796 aaKnown RBP20.73■□□□□ 0.91
KCNMA1-274ENST00000639968 GOLGA3Q08378 1498 aa20.72■□□□□ 0.91
KCNMA1-274ENST00000639968 TNIKQ9UKE5 1360 aa20.69■□□□□ 0.9
KCNMA1-274ENST00000639968 CCDC88BA6NC98 1476 aa20.68■□□□□ 0.9
KCNMA1-274ENST00000639968 EEA1Q15075 1411 aa20.62■□□□□ 0.89
KCNMA1-274ENST00000639968 WIZO95785 1651 aa20.61■□□□□ 0.89
KCNMA1-274ENST00000639968 TONSLQ96HA7 1378 aa20.59■□□□□ 0.89
KCNMA1-274ENST00000639968 RRP7BPQ9NSQ0 103 aa20.55■□□□□ 0.88
KCNMA1-274ENST00000639968 MTUS2Q5JR59 1369 aa20.55■□□□□ 0.88
KCNMA1-274ENST00000639968 CEP164Q9UPV0 1460 aa20.53■□□□□ 0.88
KCNMA1-274ENST00000639968 CDK11AQ9UQ88 783 aaPredicted RBP20.5■□□□□ 0.87
KCNMA1-274ENST00000639968 KIF27Q86VH2 1401 aa20.48■□□□□ 0.87
KCNMA1-274ENST00000639968 FKBP8Q14318 412 aa20.47■□□□□ 0.87
KCNMA1-274ENST00000639968 SIN3AQ96ST3 1273 aa20.47■□□□□ 0.87
KCNMA1-274ENST00000639968 KANK4Q5T7N3 995 aaPredicted RBP20.46■□□□□ 0.87
KCNMA1-274ENST00000639968 HNRNPUQ00839 825 aaKnown RBP eCLIP20.44■□□□□ 0.86
KCNMA1-274ENST00000639968 FAM9BQ8IZU0 186 aa20.43■□□□□ 0.86
KCNMA1-274ENST00000639968 RUSC2Q8N2Y8 1516 aa20.42■□□□□ 0.86
KCNMA1-274ENST00000639968 SENP3-EIF4A1A0A087X0R7 540 aa20.4■□□□□ 0.86
KCNMA1-274ENST00000639968 CHMP7Q8WUX9 453 aaPredicted RBP20.38■□□□□ 0.85
KCNMA1-274ENST00000639968 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.38■□□□□ 0.85
KCNMA1-274ENST00000639968 SALL2Q9Y467 1007 aaPredicted RBP20.38■□□□□ 0.85
KCNMA1-274ENST00000639968 KDM2AQ9Y2K7 1162 aa20.37■□□□□ 0.85
KCNMA1-274ENST00000639968 DAXXQ9UER7 740 aaPredicted RBP20.33■□□□□ 0.85
KCNMA1-274ENST00000639968 CUX2O14529 1486 aa20.33■□□□□ 0.85
KCNMA1-274ENST00000639968 IRX6P78412 446 aaPredicted RBP20.32■□□□□ 0.84
KCNMA1-274ENST00000639968 CLSPNQ9HAW4 1339 aa20.29■□□□□ 0.84
KCNMA1-274ENST00000639968 MYT1Q01538 1121 aa20.29■□□□□ 0.84
KCNMA1-274ENST00000639968 CARMIL1Q5VZK9 1371 aa20.29■□□□□ 0.84
KCNMA1-274ENST00000639968 VPS8Q8N3P4 1428 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms