RNA–Protein interactions for RNA: ENST00000639913.1

KCNMA1-273, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 12,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-273ENST00000639913 DCAF8L2P0C7V8 631 aa14.89□□□□□ -0.03
KCNMA1-273ENST00000639913 SUPT5HO00267 1087 aaKnown RBP14.45□□□□□ -0.1
KCNMA1-273ENST00000639913 EHMT2Q96KQ7 1210 aa14.29□□□□□ -0.12
KCNMA1-273ENST00000639913 SHROOM4Q9ULL8 1493 aa14.21□□□□□ -0.13
KCNMA1-273ENST00000639913 TTBK1Q5TCY1 1321 aaPredicted RBP13.83□□□□□ -0.2
KCNMA1-273ENST00000639913 PCGF6Q9BYE7 350 aa13.8□□□□□ -0.2
KCNMA1-273ENST00000639913 NISCHQ9Y2I1 1504 aa13.73□□□□□ -0.21
KCNMA1-273ENST00000639913 FAM9AQ8IZU1 332 aaPredicted RBP13.73□□□□□ -0.21
KCNMA1-273ENST00000639913 PELP1Q8IZL8 1130 aaKnown RBP13.61□□□□□ -0.23
KCNMA1-273ENST00000639913 RANGAP1P46060 587 aaPredicted RBP13.46□□□□□ -0.25
KCNMA1-273ENST00000639913 APLP2Q06481 763 aa13.42□□□□□ -0.26
KCNMA1-273ENST00000639913 YTHDC1Q96MU7 727 aaKnown RBP13.42□□□□□ -0.26
KCNMA1-273ENST00000639913 PPARGC1BQ86YN6 1023 aaKnown RBP13.34□□□□□ -0.27
KCNMA1-273ENST00000639913 CENPBP07199 599 aaPredicted RBP13.33□□□□□ -0.28
KCNMA1-273ENST00000639913 CCER1Q8TC90 406 aaPredicted RBP13.3□□□□□ -0.28
KCNMA1-273ENST00000639913 ERICH6Q7L0X2 663 aa13.29□□□□□ -0.28
KCNMA1-273ENST00000639913 ZEB1P37275 1124 aaPredicted RBP13.19□□□□□ -0.3
KCNMA1-273ENST00000639913 TRIM41Q8WV44 630 aa13.16□□□□□ -0.3
KCNMA1-273ENST00000639913 HRCP23327 699 aa13.09□□□□□ -0.31
KCNMA1-273ENST00000639913 ATP1B4Q9UN42 357 aaPredicted RBP13.09□□□□□ -0.31
KCNMA1-273ENST00000639913 UBTFP17480 764 aaKnown RBP13.05□□□□□ -0.32
KCNMA1-273ENST00000639913 NEFLP07196 543 aa13.02□□□□□ -0.33
KCNMA1-273ENST00000639913 LOC105371045A0A1W2PR82 267 aa12.99□□□□□ -0.33
KCNMA1-273ENST00000639913 MYT1Q01538 1121 aa12.96□□□□□ -0.34
KCNMA1-273ENST00000639913 TRIM26Q12899 539 aaPredicted RBP12.91□□□□□ -0.34
KCNMA1-273ENST00000639913 ITGAEP38570 1179 aa12.86□□□□□ -0.35
KCNMA1-273ENST00000639913 CNGB1Q14028 1251 aaPredicted RBP12.84□□□□□ -0.35
KCNMA1-273ENST00000639913 HNRNPUL2Q1KMD3 747 aaKnown RBP12.82□□□□□ -0.36
KCNMA1-273ENST00000639913 CHIC1Q5VXU3 224 aa12.8□□□□□ -0.36
KCNMA1-273ENST00000639913 POLR3GLQ9BT43 218 aa12.8□□□□□ -0.36
KCNMA1-273ENST00000639913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.78□□□□□ -0.36
KCNMA1-273ENST00000639913 BCANQ96GW7 911 aa12.71□□□□□ -0.37
KCNMA1-273ENST00000639913 DIEXFQ68CQ4 756 aaKnown RBP12.62□□□□□ -0.39
KCNMA1-273ENST00000639913 GTF3C3Q9Y5Q9 886 aa12.6□□□□□ -0.39
KCNMA1-273ENST00000639913 DAXXQ9UER7 740 aaPredicted RBP12.57□□□□□ -0.4
KCNMA1-273ENST00000639913 RTL5Q5HYW3 569 aaPredicted RBP12.44□□□□□ -0.42
KCNMA1-273ENST00000639913 NEUROD1Q13562 356 aa12.43□□□□□ -0.42
KCNMA1-273ENST00000639913 MYT1LQ9UL68 1186 aa12.4□□□□□ -0.42
KCNMA1-273ENST00000639913 ZNF316A6NFI3 1004 aaPredicted RBP12.37□□□□□ -0.43
KCNMA1-273ENST00000639913 FAM50AQ14320 339 aaKnown RBP12.37□□□□□ -0.43
KCNMA1-273ENST00000639913 ACIN1Q9UKV3 1341 aaKnown RBP12.37□□□□□ -0.43
KCNMA1-273ENST00000639913 SLC4A1APQ9BWU0 796 aaKnown RBP12.35□□□□□ -0.43
KCNMA1-273ENST00000639913 CLSPNQ9HAW4 1339 aa12.33□□□□□ -0.43
KCNMA1-273ENST00000639913 ZNF326Q5BKZ1 582 aaKnown RBP12.29□□□□□ -0.44
KCNMA1-273ENST00000639913 TRIM52Q96A61 297 aa12.28□□□□□ -0.44
KCNMA1-273ENST00000639913 BCL11AQ9H165 835 aa12.23□□□□□ -0.45
KCNMA1-273ENST00000639913 CDK11AQ9UQ88 783 aaPredicted RBP12.21□□□□□ -0.45
KCNMA1-273ENST00000639913 ANP32CO43423 234 aa12.21□□□□□ -0.46
KCNMA1-273ENST00000639913 NPM2Q86SE8 214 aaKnown RBP12.2□□□□□ -0.46
KCNMA1-273ENST00000639913 SCAF1Q9H7N4 1312 aaKnown RBP12.18□□□□□ -0.46
KCNMA1-273ENST00000639913 ARID3CA6NKF2 412 aa12.15□□□□□ -0.46
KCNMA1-273ENST00000639913 PABPN1Q86U42 306 aaKnown RBP eCLIP12.14□□□□□ -0.47
KCNMA1-273ENST00000639913 FKBP8Q14318 412 aa12.11□□□□□ -0.47
KCNMA1-273ENST00000639913 P3H3Q8IVL6 736 aa12.1□□□□□ -0.47
KCNMA1-273ENST00000639913 EIF5BO60841 1220 aaKnown RBP12.04□□□□□ -0.48
KCNMA1-273ENST00000639913 IRX6P78412 446 aaPredicted RBP12.03□□□□□ -0.48
KCNMA1-273ENST00000639913 CANXP27824 592 aaKnown RBP12.03□□□□□ -0.48
KCNMA1-273ENST00000639913 NBR1Q14596 966 aa12.01□□□□□ -0.49
KCNMA1-273ENST00000639913 ANP32AP39687 249 aaKnown RBP12□□□□□ -0.49
KCNMA1-273ENST00000639913 DDX10Q13206 875 aaKnown RBP11.99□□□□□ -0.49
KCNMA1-273ENST00000639913 MIER1Q8N108 512 aa11.98□□□□□ -0.49
KCNMA1-273ENST00000639913 SENP3-EIF4A1A0A087X0R7 540 aa11.94□□□□□ -0.5
KCNMA1-273ENST00000639913 FAM9BQ8IZU0 186 aa11.94□□□□□ -0.5
KCNMA1-273ENST00000639913 SALL2Q9Y467 1007 aaPredicted RBP11.94□□□□□ -0.5
KCNMA1-273ENST00000639913 HNRNPUQ00839 825 aaKnown RBP eCLIP11.93□□□□□ -0.5
KCNMA1-273ENST00000639913 ARXQ96QS3 562 aa11.93□□□□□ -0.5
KCNMA1-273ENST00000639913 HIRIP3Q9BW71 556 aaPredicted RBP11.93□□□□□ -0.5
KCNMA1-273ENST00000639913 CSRNP3Q8WYN3 585 aa11.92□□□□□ -0.5
KCNMA1-273ENST00000639913 ABCC9O60706 1549 aa11.89□□□□□ -0.51
KCNMA1-273ENST00000639913 ZNF777Q9ULD5 760 aaPredicted RBP11.89□□□□□ -0.51
KCNMA1-273ENST00000639913 SLC24A1O60721 1099 aa11.88□□□□□ -0.51
KCNMA1-273ENST00000639913 ZBTB47Q9UFB7 747 aaPredicted RBP11.88□□□□□ -0.51
KCNMA1-273ENST00000639913 FBLN2P98095 1184 aa11.86□□□□□ -0.51
KCNMA1-273ENST00000639913 MYO15BQ96JP2 1530 aa11.85□□□□□ -0.51
KCNMA1-273ENST00000639913 DCAF1Q9Y4B6 1507 aa11.83□□□□□ -0.52
KCNMA1-273ENST00000639913 CHIC2Q9UKJ5 165 aa11.8□□□□□ -0.52
KCNMA1-273ENST00000639913 CCDC136Q96JN2 1154 aa11.79□□□□□ -0.52
KCNMA1-273ENST00000639913 TONSLQ96HA7 1378 aa11.79□□□□□ -0.52
KCNMA1-273ENST00000639913 MRS2Q9HD23 443 aa11.75□□□□□ -0.53
KCNMA1-273ENST00000639913 SENP3Q9H4L4 574 aaPredicted RBP11.73□□□□□ -0.53
KCNMA1-273ENST00000639913 HSP90AA1P07900 732 aaKnown RBP11.72□□□□□ -0.53
KCNMA1-273ENST00000639913 RTN4Q9NQC3 1192 aaKnown RBP11.72□□□□□ -0.53
KCNMA1-273ENST00000639913 CHGAP10645 457 aaKnown RBP11.7□□□□□ -0.54
KCNMA1-273ENST00000639913 ANP32EQ9BTT0 268 aa11.7□□□□□ -0.54
KCNMA1-273ENST00000639913 KDM2AQ9Y2K7 1162 aa11.69□□□□□ -0.54
KCNMA1-273ENST00000639913 LAS1LQ9Y4W2 734 aaKnown RBP11.68□□□□□ -0.54
KCNMA1-273ENST00000639913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.66□□□□□ -0.54
KCNMA1-273ENST00000639913 NEFMP07197 916 aa11.65□□□□□ -0.54
KCNMA1-273ENST00000639913 PLPPR3Q6T4P5 718 aa11.65□□□□□ -0.54
KCNMA1-273ENST00000639913 TMC1Q8TDI8 760 aa11.63□□□□□ -0.55
KCNMA1-273ENST00000639913 ANP32BQ92688 251 aaKnown RBP11.63□□□□□ -0.55
KCNMA1-273ENST00000639913 RRP7BPQ9NSQ0 103 aa11.61□□□□□ -0.55
KCNMA1-273ENST00000639913 SUPT16HQ9Y5B9 1047 aaKnown RBP11.61□□□□□ -0.55
KCNMA1-273ENST00000639913 UPF2Q9HAU5 1272 aaKnown RBP11.59□□□□□ -0.55
KCNMA1-273ENST00000639913 TPRNQ4KMQ1 711 aa11.57□□□□□ -0.56
KCNMA1-273ENST00000639913 SCRIBQ14160 1630 aa11.56□□□□□ -0.56
KCNMA1-273ENST00000639913 WDR43Q15061 677 aaKnown RBP eCLIP11.55□□□□□ -0.56
KCNMA1-273ENST00000639913 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.55□□□□□ -0.56
KCNMA1-273ENST00000639913 SIN3AQ96ST3 1273 aa11.54□□□□□ -0.56
KCNMA1-273ENST00000639913 CLIP1P30622 1438 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms