RNA–Protein interactions for RNA: ENST00000639418.1

SPIN3-221, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-221ENST00000639418 NISCHQ9Y2I1 1504 aa27.01■■□□□ 1.91
SPIN3-221ENST00000639418 SHROOM4Q9ULL8 1493 aa23.09■■□□□ 1.29
SPIN3-221ENST00000639418 CCDC180Q9P1Z9 1646 aa22.93■■□□□ 1.26
SPIN3-221ENST00000639418 ZCCHC6Q5VYS8 1495 aaKnown RBP22.87■■□□□ 1.25
SPIN3-221ENST00000639418 SUPT5HO00267 1087 aaKnown RBP22.7■■□□□ 1.22
SPIN3-221ENST00000639418 DCAF8L2P0C7V8 631 aa22.34■■□□□ 1.17
SPIN3-221ENST00000639418 DCAF1Q9Y4B6 1507 aa22.17■■□□□ 1.14
SPIN3-221ENST00000639418 CHIC1Q5VXU3 224 aa22.13■■□□□ 1.13
SPIN3-221ENST00000639418 MYO15BQ96JP2 1530 aa22.08■■□□□ 1.13
SPIN3-221ENST00000639418 HRCP23327 699 aa21.66■■□□□ 1.06
SPIN3-221ENST00000639418 ABCC9O60706 1549 aa21.61■■□□□ 1.05
SPIN3-221ENST00000639418 PCGF6Q9BYE7 350 aa21.57■■□□□ 1.04
SPIN3-221ENST00000639418 SCRIBQ14160 1630 aa21.5■■□□□ 1.03
SPIN3-221ENST00000639418 LOC105371045A0A1W2PR82 267 aa21.47■■□□□ 1.03
SPIN3-221ENST00000639418 RSF1Q96T23 1441 aaPredicted RBP21.41■■□□□ 1.02
SPIN3-221ENST00000639418 PELP1Q8IZL8 1130 aaKnown RBP21.33■■□□□ 1
SPIN3-221ENST00000639418 RB1CC1Q8TDY2 1594 aa21.21■□□□□ 0.99
SPIN3-221ENST00000639418 PPARGC1BQ86YN6 1023 aaKnown RBP21.17■□□□□ 0.98
SPIN3-221ENST00000639418 NACADO15069 1562 aa21.17■□□□□ 0.98
SPIN3-221ENST00000639418 TRIM41Q8WV44 630 aa21.15■□□□□ 0.98
SPIN3-221ENST00000639418 TRIM26Q12899 539 aaPredicted RBP21.15■□□□□ 0.98
SPIN3-221ENST00000639418 CECR2Q9BXF3 1484 aa21.05■□□□□ 0.96
SPIN3-221ENST00000639418 MROH2BQ7Z745 1585 aa21■□□□□ 0.95
SPIN3-221ENST00000639418 FAM9AQ8IZU1 332 aaPredicted RBP20.97■□□□□ 0.95
SPIN3-221ENST00000639418 WIZO95785 1651 aa20.91■□□□□ 0.94
SPIN3-221ENST00000639418 BAZ1AQ9NRL2 1556 aaPredicted RBP20.79■□□□□ 0.92
SPIN3-221ENST00000639418 EHMT2Q96KQ7 1210 aa20.78■□□□□ 0.92
SPIN3-221ENST00000639418 ZEB1P37275 1124 aaPredicted RBP20.75■□□□□ 0.91
SPIN3-221ENST00000639418 MYT1Q01538 1121 aa20.74■□□□□ 0.91
SPIN3-221ENST00000639418 EIF4G1Q04637 1599 aaKnown RBP20.68■□□□□ 0.9
SPIN3-221ENST00000639418 TOP2AP11388 1531 aaKnown RBP20.58■□□□□ 0.89
SPIN3-221ENST00000639418 SMARCA4P51532 1647 aa20.55■□□□□ 0.88
SPIN3-221ENST00000639418 UNC13AQ9UPW8 1703 aa20.5■□□□□ 0.87
SPIN3-221ENST00000639418 CCDC88BA6NC98 1476 aa20.49■□□□□ 0.87
SPIN3-221ENST00000639418 ABCC8Q09428 1581 aa20.47■□□□□ 0.87
SPIN3-221ENST00000639418 SMARCA2P51531 1590 aa20.47■□□□□ 0.87
SPIN3-221ENST00000639418 SOGA1O94964 1423 aa20.3■□□□□ 0.84
SPIN3-221ENST00000639418 WRNQ14191 1432 aaPredicted RBP eCLIP20.28■□□□□ 0.84
SPIN3-221ENST00000639418 CEP162Q5TB80 1403 aa20.27■□□□□ 0.84
SPIN3-221ENST00000639418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.26■□□□□ 0.83
SPIN3-221ENST00000639418 EEA1Q15075 1411 aa20.24■□□□□ 0.83
SPIN3-221ENST00000639418 CCER1Q8TC90 406 aaPredicted RBP20.24■□□□□ 0.83
SPIN3-221ENST00000639418 TNIKQ9UKE5 1360 aa20.23■□□□□ 0.83
SPIN3-221ENST00000639418 BICRAQ9NZM4 1560 aa20.22■□□□□ 0.83
SPIN3-221ENST00000639418 PABPN1Q86U42 306 aaKnown RBP eCLIP20.21■□□□□ 0.83
SPIN3-221ENST00000639418 CSRNP3Q8WYN3 585 aa20.2■□□□□ 0.82
SPIN3-221ENST00000639418 SCAF1Q9H7N4 1312 aaKnown RBP20.19■□□□□ 0.82
SPIN3-221ENST00000639418 RUSC2Q8N2Y8 1516 aa20.19■□□□□ 0.82
SPIN3-221ENST00000639418 PEG3Q9GZU2 1588 aa20.15■□□□□ 0.82
SPIN3-221ENST00000639418 TTBK1Q5TCY1 1321 aaPredicted RBP20.15■□□□□ 0.82
SPIN3-221ENST00000639418 UBTFP17480 764 aaKnown RBP20.13■□□□□ 0.81
SPIN3-221ENST00000639418 GOLGA3Q08378 1498 aa20.1■□□□□ 0.81
SPIN3-221ENST00000639418 SYNJ1O43426 1573 aa20.02■□□□□ 0.8
SPIN3-221ENST00000639418 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
SPIN3-221ENST00000639418 CEP164Q9UPV0 1460 aa19.98■□□□□ 0.79
SPIN3-221ENST00000639418 KIF21BO75037 1637 aa19.96■□□□□ 0.79
SPIN3-221ENST00000639418 BAZ1BQ9UIG0 1483 aaKnown RBP19.95■□□□□ 0.78
SPIN3-221ENST00000639418 DIEXFQ68CQ4 756 aaKnown RBP19.9■□□□□ 0.78
SPIN3-221ENST00000639418 CLIP1P30622 1438 aa19.87■□□□□ 0.77
SPIN3-221ENST00000639418 ACIN1Q9UKV3 1341 aaKnown RBP19.81■□□□□ 0.76
SPIN3-221ENST00000639418 VPS8Q8N3P4 1428 aa19.8■□□□□ 0.76
SPIN3-221ENST00000639418 RAPGEF2Q9Y4G8 1499 aa19.8■□□□□ 0.76
SPIN3-221ENST00000639418 TOP2BQ02880 1626 aa19.77■□□□□ 0.76
SPIN3-221ENST00000639418 NEUROD1Q13562 356 aa19.76■□□□□ 0.75
SPIN3-221ENST00000639418 HNRNPUL2Q1KMD3 747 aaKnown RBP19.75■□□□□ 0.75
SPIN3-221ENST00000639418 ZNF316A6NFI3 1004 aaPredicted RBP19.73■□□□□ 0.75
SPIN3-221ENST00000639418 APLP2Q06481 763 aa19.73■□□□□ 0.75
SPIN3-221ENST00000639418 BIVM-ERCC5R4GMW8 1640 aa19.71■□□□□ 0.74
SPIN3-221ENST00000639418 CENPBP07199 599 aaPredicted RBP19.69■□□□□ 0.74
SPIN3-221ENST00000639418 RANGAP1P46060 587 aaPredicted RBP19.69■□□□□ 0.74
SPIN3-221ENST00000639418 ERICH3Q5RHP9 1530 aa19.62■□□□□ 0.73
SPIN3-221ENST00000639418 PRXQ9BXM0 1461 aa19.6■□□□□ 0.73
SPIN3-221ENST00000639418 HMGXB3Q12766 1538 aa19.6■□□□□ 0.73
SPIN3-221ENST00000639418 NCAPD3P42695 1498 aa19.58■□□□□ 0.72
SPIN3-221ENST00000639418 GTF3C3Q9Y5Q9 886 aa19.58■□□□□ 0.72
SPIN3-221ENST00000639418 CUX1P39880 1505 aa19.55■□□□□ 0.72
SPIN3-221ENST00000639418 ARAP1Q96P48 1450 aa19.54■□□□□ 0.72
SPIN3-221ENST00000639418 KIF27Q86VH2 1401 aa19.49■□□□□ 0.71
SPIN3-221ENST00000639418 CFTRP13569 1480 aa19.46■□□□□ 0.71
SPIN3-221ENST00000639418 MIER1Q8N108 512 aa19.45■□□□□ 0.7
SPIN3-221ENST00000639418 KANK4Q5T7N3 995 aaPredicted RBP19.44■□□□□ 0.7
SPIN3-221ENST00000639418 YTHDC1Q96MU7 727 aaKnown RBP19.43■□□□□ 0.7
SPIN3-221ENST00000639418 CLSPNQ9HAW4 1339 aa19.4■□□□□ 0.7
SPIN3-221ENST00000639418 DHX57Q6P158 1386 aaKnown RBP19.39■□□□□ 0.69
SPIN3-221ENST00000639418 RRBP1Q9P2E9 1410 aaKnown RBP19.36■□□□□ 0.69
SPIN3-221ENST00000639418 ARHGAP35Q9NRY4 1499 aa19.35■□□□□ 0.69
SPIN3-221ENST00000639418 PRDM2Q13029 1718 aa19.33■□□□□ 0.69
SPIN3-221ENST00000639418 BCL11AQ9H165 835 aa19.3■□□□□ 0.68
SPIN3-221ENST00000639418 CUX2O14529 1486 aa19.27■□□□□ 0.68
SPIN3-221ENST00000639418 CCNB3Q8WWL7 1395 aa19.27■□□□□ 0.68
SPIN3-221ENST00000639418 IGF1RP08069 1367 aa19.26■□□□□ 0.67
SPIN3-221ENST00000639418 CADPSQ9ULU8 1353 aa19.21■□□□□ 0.67
SPIN3-221ENST00000639418 ITGAEP38570 1179 aa19.18■□□□□ 0.66
SPIN3-221ENST00000639418 FGD5Q6ZNL6 1462 aa19.18■□□□□ 0.66
SPIN3-221ENST00000639418 CARMIL1Q5VZK9 1371 aa19.18■□□□□ 0.66
SPIN3-221ENST00000639418 TIAM1Q13009 1591 aa19.17■□□□□ 0.66
SPIN3-221ENST00000639418 MAP3K1Q13233 1512 aa19.16■□□□□ 0.66
SPIN3-221ENST00000639418 PRKCSHP14314 528 aaPredicted RBP19.14■□□□□ 0.65
SPIN3-221ENST00000639418 RAB3GAP2Q9H2M9 1393 aa19.11■□□□□ 0.65
SPIN3-221ENST00000639418 LRRC9Q6ZRR7 1453 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms