RNA–Protein interactions for RNA: ENST00000639174.1

PIGN-231, Transcript of phosphatidylinositol glycan anchor biosynthesis class N, human

TSL 5 BASIC

Gene PIGN, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIGN-231	ENST00000639174	NISCH	Q9Y2I1	1504 aa		16.78	■□□□□ 0.28
PIGN-231	ENST00000639174	CCDC180	Q9P1Z9	1646 aa		14.34	□□□□□ -0.11
PIGN-231	ENST00000639174	SHROOM4	Q9ULL8	1493 aa		14.3	□□□□□ -0.12
PIGN-231	ENST00000639174	DCAF8L2	P0C7V8	631 aa		14.26	□□□□□ -0.13
PIGN-231	ENST00000639174	ZCCHC6	Q5VYS8	1495 aa	Known RBP	14.13	□□□□□ -0.15
PIGN-231	ENST00000639174	SUPT5H	O00267	1087 aa	Known RBP	14.04	□□□□□ -0.16
PIGN-231	ENST00000639174	DCAF1	Q9Y4B6	1507 aa		13.77	□□□□□ -0.21
PIGN-231	ENST00000639174	ABCC9	O60706	1549 aa		13.51	□□□□□ -0.25
PIGN-231	ENST00000639174	CHIC1	Q5VXU3	224 aa		13.45	□□□□□ -0.26
PIGN-231	ENST00000639174	MYO15B	Q96JP2	1530 aa		13.44	□□□□□ -0.26
PIGN-231	ENST00000639174	SCRIB	Q14160	1630 aa		13.44	□□□□□ -0.26
PIGN-231	ENST00000639174	NACAD	O15069	1562 aa		13.37	□□□□□ -0.27
PIGN-231	ENST00000639174	RB1CC1	Q8TDY2	1594 aa		13.22	□□□□□ -0.29
PIGN-231	ENST00000639174	RSF1	Q96T23	1441 aa	Predicted RBP	13.21	□□□□□ -0.29
PIGN-231	ENST00000639174	TRIM41	Q8WV44	630 aa		13.13	□□□□□ -0.31
PIGN-231	ENST00000639174	CECR2	Q9BXF3	1484 aa		13.05	□□□□□ -0.32
PIGN-231	ENST00000639174	LOC105371045	A0A1W2PR82	267 aa		13.03	□□□□□ -0.32
PIGN-231	ENST00000639174	MROH2B	Q7Z745	1585 aa		13	□□□□□ -0.33
PIGN-231	ENST00000639174	FAM9A	Q8IZU1	332 aa	Predicted RBP	12.99	□□□□□ -0.33
PIGN-231	ENST00000639174	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	12.97	□□□□□ -0.33
PIGN-231	ENST00000639174	PCGF6	Q9BYE7	350 aa		12.96	□□□□□ -0.33
PIGN-231	ENST00000639174	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.92	□□□□□ -0.34
PIGN-231	ENST00000639174	WIZ	O95785	1651 aa		12.9	□□□□□ -0.34
PIGN-231	ENST00000639174	EHMT2	Q96KQ7	1210 aa		12.88	□□□□□ -0.35
PIGN-231	ENST00000639174	SMARCA4	P51532	1647 aa		12.8	□□□□□ -0.36
PIGN-231	ENST00000639174	HRC	P23327	699 aa		12.8	□□□□□ -0.36
PIGN-231	ENST00000639174	TRIM26	Q12899	539 aa	Predicted RBP	12.79	□□□□□ -0.36
PIGN-231	ENST00000639174	TOP2A	P11388	1531 aa	Known RBP	12.78	□□□□□ -0.36
PIGN-231	ENST00000639174	UNC13A	Q9UPW8	1703 aa		12.75	□□□□□ -0.37
PIGN-231	ENST00000639174	CCDC88B	A6NC98	1476 aa		12.71	□□□□□ -0.38
PIGN-231	ENST00000639174	BICRA	Q9NZM4	1560 aa		12.65	□□□□□ -0.38
PIGN-231	ENST00000639174	SMARCA2	P51531	1590 aa		12.64	□□□□□ -0.39
PIGN-231	ENST00000639174	BAZ1B	Q9UIG0	1483 aa	Known RBP	12.6	□□□□□ -0.39
PIGN-231	ENST00000639174	UBTF	P17480	764 aa	Known RBP	12.59	□□□□□ -0.39
PIGN-231	ENST00000639174	ABCC8	Q09428	1581 aa		12.58	□□□□□ -0.4
PIGN-231	ENST00000639174	ZEB1	P37275	1124 aa	Predicted RBP	12.57	□□□□□ -0.4
PIGN-231	ENST00000639174	ATAD2B	Q9ULI0	1458 aa		12.55	□□□□□ -0.4
PIGN-231	ENST00000639174	CSRNP3	Q8WYN3	585 aa		12.54	□□□□□ -0.4
PIGN-231	ENST00000639174	EEA1	Q15075	1411 aa		12.54	□□□□□ -0.4
PIGN-231	ENST00000639174	EIF4G1	Q04637	1599 aa	Known RBP	12.53	□□□□□ -0.4
PIGN-231	ENST00000639174	WRN	Q14191	1432 aa	Predicted RBP eCLIP	12.52	□□□□□ -0.4
PIGN-231	ENST00000639174	PEG3	Q9GZU2	1588 aa		12.51	□□□□□ -0.41
PIGN-231	ENST00000639174	PPARGC1B	Q86YN6	1023 aa	Known RBP	12.51	□□□□□ -0.41
PIGN-231	ENST00000639174	SOGA1	O94964	1423 aa		12.46	□□□□□ -0.41
PIGN-231	ENST00000639174	TTBK1	Q5TCY1	1321 aa	Predicted RBP	12.44	□□□□□ -0.42
PIGN-231	ENST00000639174	TNIK	Q9UKE5	1360 aa		12.42	□□□□□ -0.42
PIGN-231	ENST00000639174	APLP2	Q06481	763 aa		12.42	□□□□□ -0.42
PIGN-231	ENST00000639174	GOLGA3	Q08378	1498 aa		12.41	□□□□□ -0.42
PIGN-231	ENST00000639174	CEP162	Q5TB80	1403 aa		12.41	□□□□□ -0.42
PIGN-231	ENST00000639174	CEP164	Q9UPV0	1460 aa		12.36	□□□□□ -0.43
PIGN-231	ENST00000639174	CCER1	Q8TC90	406 aa	Predicted RBP	12.36	□□□□□ -0.43
PIGN-231	ENST00000639174	RANGAP1	P46060	587 aa	Predicted RBP	12.35	□□□□□ -0.43
PIGN-231	ENST00000639174	RUSC2	Q8N2Y8	1516 aa		12.34	□□□□□ -0.43
PIGN-231	ENST00000639174	NCAPD3	P42695	1498 aa		12.34	□□□□□ -0.43
PIGN-231	ENST00000639174	HMGXB3	Q12766	1538 aa		12.32	□□□□□ -0.44
PIGN-231	ENST00000639174	SYNJ1	O43426	1573 aa		12.31	□□□□□ -0.44
PIGN-231	ENST00000639174	CLIP1	P30622	1438 aa		12.27	□□□□□ -0.45
PIGN-231	ENST00000639174	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	12.26	□□□□□ -0.45
PIGN-231	ENST00000639174	KIF21B	O75037	1637 aa		12.23	□□□□□ -0.45
PIGN-231	ENST00000639174	TOP2B	Q02880	1626 aa		12.23	□□□□□ -0.45
PIGN-231	ENST00000639174	KIF27	Q86VH2	1401 aa		12.21	□□□□□ -0.45
PIGN-231	ENST00000639174	CFTR	P13569	1480 aa		12.18	□□□□□ -0.46
PIGN-231	ENST00000639174	RAPGEF2	Q9Y4G8	1499 aa		12.18	□□□□□ -0.46
PIGN-231	ENST00000639174	CADPS	Q9ULU8	1353 aa		12.16	□□□□□ -0.46
PIGN-231	ENST00000639174	VPS8	Q8N3P4	1428 aa		12.15	□□□□□ -0.46
PIGN-231	ENST00000639174	BIVM-ERCC5	R4GMW8	1640 aa		12.15	□□□□□ -0.46
PIGN-231	ENST00000639174	HNRNPUL2	Q1KMD3	747 aa	Known RBP	12.15	□□□□□ -0.46
PIGN-231	ENST00000639174	CUX1	P39880	1505 aa		12.12	□□□□□ -0.47
PIGN-231	ENST00000639174	ERICH3	Q5RHP9	1530 aa		12.09	□□□□□ -0.47
PIGN-231	ENST00000639174	CC2D2A	Q9P2K1	1620 aa		12.09	□□□□□ -0.47
PIGN-231	ENST00000639174	CUX2	O14529	1486 aa		12.08	□□□□□ -0.47
PIGN-231	ENST00000639174	PRX	Q9BXM0	1461 aa		12.07	□□□□□ -0.48
PIGN-231	ENST00000639174	FANCD2	Q9BXW9	1451 aa		12.02	□□□□□ -0.48
PIGN-231	ENST00000639174	ATP1B4	Q9UN42	357 aa	Predicted RBP	12.02	□□□□□ -0.48
PIGN-231	ENST00000639174	CARMIL1	Q5VZK9	1371 aa		12.01	□□□□□ -0.49
PIGN-231	ENST00000639174	FGD5	Q6ZNL6	1462 aa		12.01	□□□□□ -0.49
PIGN-231	ENST00000639174	PRDM2	Q13029	1718 aa		12	□□□□□ -0.49
PIGN-231	ENST00000639174	IGF1R	P08069	1367 aa		11.98	□□□□□ -0.49
PIGN-231	ENST00000639174	DIEXF	Q68CQ4	756 aa	Known RBP	11.95	□□□□□ -0.5
PIGN-231	ENST00000639174	ARAP1	Q96P48	1450 aa		11.94	□□□□□ -0.5
PIGN-231	ENST00000639174	ITGAE	P38570	1179 aa		11.94	□□□□□ -0.5
PIGN-231	ENST00000639174	P3H3	Q8IVL6	736 aa		11.93	□□□□□ -0.5
PIGN-231	ENST00000639174	PDS5B	Q9NTI5	1447 aa		11.91	□□□□□ -0.5
PIGN-231	ENST00000639174	KANK4	Q5T7N3	995 aa	Predicted RBP	11.91	□□□□□ -0.5
PIGN-231	ENST00000639174	DNMBP	Q6XZF7	1577 aa		11.91	□□□□□ -0.5
PIGN-231	ENST00000639174	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.91	□□□□□ -0.5
PIGN-231	ENST00000639174	ARHGAP35	Q9NRY4	1499 aa		11.89	□□□□□ -0.51
PIGN-231	ENST00000639174	NES	P48681	1621 aa		11.89	□□□□□ -0.51
PIGN-231	ENST00000639174	FHAD1	B1AJZ9	1412 aa		11.89	□□□□□ -0.51
PIGN-231	ENST00000639174	TOPBP1	Q92547	1522 aa		11.88	□□□□□ -0.51
PIGN-231	ENST00000639174	RAD54L2	Q9Y4B4	1467 aa		11.88	□□□□□ -0.51
PIGN-231	ENST00000639174	CENPB	P07199	599 aa	Predicted RBP	11.87	□□□□□ -0.51
PIGN-231	ENST00000639174	LAMC3	Q9Y6N6	1575 aa		11.86	□□□□□ -0.51
PIGN-231	ENST00000639174	POLA1	P09884	1462 aa	Predicted RBP	11.86	□□□□□ -0.51
PIGN-231	ENST00000639174	FAM50A	Q14320	339 aa	Known RBP	11.86	□□□□□ -0.51
PIGN-231	ENST00000639174	CCNB3	Q8WWL7	1395 aa		11.85	□□□□□ -0.51
PIGN-231	ENST00000639174	ABCA10	Q8WWZ4	1543 aa		11.84	□□□□□ -0.51
PIGN-231	ENST00000639174	CLSPN	Q9HAW4	1339 aa		11.83	□□□□□ -0.52
PIGN-231	ENST00000639174	TDRD9	Q8NDG6	1382 aa	Known RBP	11.81	□□□□□ -0.52
PIGN-231	ENST00000639174	RRBP1	Q9P2E9	1410 aa	Known RBP	11.79	□□□□□ -0.52

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