RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 CHIC1Q5VXU3 224 aa15.59■□□□□ 0.09
CDRT1-208ENST00000630868 AEBP2Q6ZN18 517 aaPredicted RBP15.31■□□□□ 0.04
CDRT1-208ENST00000630868 PHF23Q9BUL5 403 aaPredicted RBP13.85□□□□□ -0.19
CDRT1-208ENST00000630868 PLPPR3Q6T4P5 718 aa12.93□□□□□ -0.34
CDRT1-208ENST00000630868 SENP3Q9H4L4 574 aaPredicted RBP12.75□□□□□ -0.37
CDRT1-208ENST00000630868 EHMT2Q96KQ7 1210 aa12.23□□□□□ -0.45
CDRT1-208ENST00000630868 ADRA2BP18089 450 aa12.21□□□□□ -0.45
CDRT1-208ENST00000630868 KCNA4P22459 653 aa12.16□□□□□ -0.46
CDRT1-208ENST00000630868 PPP6R1Q9UPN7 881 aa11.98□□□□□ -0.49
CDRT1-208ENST00000630868 FOXD1Q16676 465 aa11.82□□□□□ -0.52
CDRT1-208ENST00000630868 CSRNP3Q8WYN3 585 aa11.73□□□□□ -0.53
CDRT1-208ENST00000630868 SLC4A1APQ9BWU0 796 aaKnown RBP11.65□□□□□ -0.54
CDRT1-208ENST00000630868 PPP4R3CPQ6ZMV5 832 aa11.53□□□□□ -0.56
CDRT1-208ENST00000630868 NCBP3Q53F19 620 aaKnown RBP11.35□□□□□ -0.59
CDRT1-208ENST00000630868 NPM3O75607 178 aaKnown RBP11.31□□□□□ -0.6
CDRT1-208ENST00000630868 PIAS4Q8N2W9 510 aaPredicted RBP11.3□□□□□ -0.6
CDRT1-208ENST00000630868 ZBTB22O15209 634 aa11.26□□□□□ -0.61
CDRT1-208ENST00000630868 SLC24A1O60721 1099 aa11.04□□□□□ -0.64
CDRT1-208ENST00000630868 CNKSR2Q8WXI2 1034 aa11□□□□□ -0.65
CDRT1-208ENST00000630868 RTN4Q9NQC3 1192 aaKnown RBP10.96□□□□□ -0.65
CDRT1-208ENST00000630868 FOXD4L1Q9NU39 408 aa10.92□□□□□ -0.66
CDRT1-208ENST00000630868 AMER1Q5JTC6 1135 aaPredicted RBP10.84□□□□□ -0.67
CDRT1-208ENST00000630868 SCAF1Q9H7N4 1312 aaKnown RBP10.81□□□□□ -0.68
CDRT1-208ENST00000630868 DNAJC5BQ9UF47 199 aa10.8□□□□□ -0.68
CDRT1-208ENST00000630868 MAPK8IP2Q13387 824 aaPredicted RBP10.67□□□□□ -0.7
CDRT1-208ENST00000630868 RNF216Q9NWF9 866 aaPredicted RBP10.62□□□□□ -0.71
CDRT1-208ENST00000630868 FKBP8Q14318 412 aa10.54□□□□□ -0.72
CDRT1-208ENST00000630868 MSH5O43196 834 aa10.52□□□□□ -0.73
CDRT1-208ENST00000630868 SLC4A2P04920 1241 aa10.52□□□□□ -0.73
CDRT1-208ENST00000630868 ATXN8OSP0DMR3 200 aa10.41□□□□□ -0.74
CDRT1-208ENST00000630868 HOXD11P31277 338 aaPredicted RBP10.4□□□□□ -0.74
CDRT1-208ENST00000630868 MYCNP04198 464 aaPredicted RBP10.38□□□□□ -0.75
CDRT1-208ENST00000630868 NISCHQ9Y2I1 1504 aa10.38□□□□□ -0.75
CDRT1-208ENST00000630868 DMRT2Q9Y5R5 561 aa10.33□□□□□ -0.76
CDRT1-208ENST00000630868 ATF5Q9Y2D1 282 aaPredicted RBP10.15□□□□□ -0.78
CDRT1-208ENST00000630868 PLCB2Q00722 1185 aa10.01□□□□□ -0.81
CDRT1-208ENST00000630868 SAMD1Q6SPF0 538 aaPredicted RBP9.9□□□□□ -0.82
CDRT1-208ENST00000630868 U3KPZ7 1027 aaPredicted RBP9.88□□□□□ -0.83
CDRT1-208ENST00000630868 HAP1P54257 671 aaPredicted RBP9.87□□□□□ -0.83
CDRT1-208ENST00000630868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.87□□□□□ -0.83
CDRT1-208ENST00000630868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.86□□□□□ -0.83
CDRT1-208ENST00000630868 HNRNPUL2Q1KMD3 747 aaKnown RBP9.86□□□□□ -0.83
CDRT1-208ENST00000630868 FBXO3Q9UK99 471 aa9.85□□□□□ -0.83
CDRT1-208ENST00000630868 DCAF8L1A6NGE4 600 aa9.83□□□□□ -0.84
CDRT1-208ENST00000630868 PRKCSHP14314 528 aaPredicted RBP9.83□□□□□ -0.84
CDRT1-208ENST00000630868 ZNF219Q9P2Y4 722 aaPredicted RBP9.81□□□□□ -0.84
CDRT1-208ENST00000630868 SPDYE4A6NLX3 237 aa9.8□□□□□ -0.84
CDRT1-208ENST00000630868 VASPP50552 380 aaPredicted RBP9.8□□□□□ -0.84
CDRT1-208ENST00000630868 PROM2Q8N271 834 aa9.78□□□□□ -0.84
CDRT1-208ENST00000630868 BCANQ96GW7 911 aa9.78□□□□□ -0.84
CDRT1-208ENST00000630868 DCAF8L2P0C7V8 631 aa9.77□□□□□ -0.85
CDRT1-208ENST00000630868 MKRN4PQ13434 485 aaPredicted RBP9.74□□□□□ -0.85
CDRT1-208ENST00000630868 IFNLR1Q8IU57 520 aaPredicted RBP9.74□□□□□ -0.85
CDRT1-208ENST00000630868 TAOK2Q9UL54 1235 aa9.74□□□□□ -0.85
CDRT1-208ENST00000630868 PKD2Q13563 968 aa9.71□□□□□ -0.86
CDRT1-208ENST00000630868 VSIG10Q8N0Z9 540 aa9.69□□□□□ -0.86
CDRT1-208ENST00000630868 KDM2AQ9Y2K7 1162 aa9.61□□□□□ -0.87
CDRT1-208ENST00000630868 TPRNQ4KMQ1 711 aa9.59□□□□□ -0.87
CDRT1-208ENST00000630868 FBLN2P98095 1184 aa9.58□□□□□ -0.88
CDRT1-208ENST00000630868 APLP2Q06481 763 aa9.56□□□□□ -0.88
CDRT1-208ENST00000630868 NPM1P06748 294 aaKnown RBP eCLIP9.54□□□□□ -0.88
CDRT1-208ENST00000630868 BBXQ8WY36 941 aaPredicted RBP9.52□□□□□ -0.89
CDRT1-208ENST00000630868 ABCC9O60706 1549 aa9.51□□□□□ -0.89
CDRT1-208ENST00000630868 PAXIP1Q6ZW49 1069 aaPredicted RBP9.5□□□□□ -0.89
CDRT1-208ENST00000630868 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.5□□□□□ -0.89
CDRT1-208ENST00000630868 CFAP44Q96MT7 982 aa9.47□□□□□ -0.89
CDRT1-208ENST00000630868 ECM2O94769 699 aaPredicted RBP9.46□□□□□ -0.9
CDRT1-208ENST00000630868 SPOCK2Q92563 424 aa9.44□□□□□ -0.9
CDRT1-208ENST00000630868 RGL2O15211 777 aa9.41□□□□□ -0.9
CDRT1-208ENST00000630868 POLA2Q14181 598 aa9.41□□□□□ -0.9
CDRT1-208ENST00000630868 TSHZ2Q9NRE2 1034 aa9.41□□□□□ -0.9
CDRT1-208ENST00000630868 TRHP20396 242 aaPredicted RBP9.4□□□□□ -0.9
CDRT1-208ENST00000630868 KLHL34Q8N239 644 aa9.4□□□□□ -0.9
CDRT1-208ENST00000630868 SPINK5Q9NQ38 1064 aaPredicted RBP9.4□□□□□ -0.9
CDRT1-208ENST00000630868 POTEDQ86YR6 584 aa9.39□□□□□ -0.91
CDRT1-208ENST00000630868 CCDC180Q9P1Z9 1646 aa9.38□□□□□ -0.91
CDRT1-208ENST00000630868 SPRYD3Q8NCJ5 442 aa9.34□□□□□ -0.91
CDRT1-208ENST00000630868 DNAJC5Q9H3Z4 198 aa9.29□□□□□ -0.92
CDRT1-208ENST00000630868 CAPN15O75808 1086 aa9.26□□□□□ -0.93
CDRT1-208ENST00000630868 CHGAP10645 457 aaKnown RBP9.26□□□□□ -0.93
CDRT1-208ENST00000630868 TIMELESSQ9UNS1 1208 aa9.26□□□□□ -0.93
CDRT1-208ENST00000630868 PLCD3Q8N3E9 789 aa9.25□□□□□ -0.93
CDRT1-208ENST00000630868 STAG3Q9UJ98 1225 aa9.24□□□□□ -0.93
CDRT1-208ENST00000630868 ZBTB12Q9Y330 459 aaPredicted RBP9.24□□□□□ -0.93
CDRT1-208ENST00000630868 NBR1Q14596 966 aa9.23□□□□□ -0.93
CDRT1-208ENST00000630868 ABCB7O75027 752 aa9.21□□□□□ -0.94
CDRT1-208ENST00000630868 TULP1O00294 542 aaPredicted RBP9.19□□□□□ -0.94
CDRT1-208ENST00000630868 CIZ1Q9ULV3 898 aaPredicted RBP9.18□□□□□ -0.94
CDRT1-208ENST00000630868 MIER1Q8N108 512 aa9.17□□□□□ -0.94
CDRT1-208ENST00000630868 ZNF692Q9BU19 519 aaPredicted RBP9.17□□□□□ -0.94
CDRT1-208ENST00000630868 HS6ST3Q8IZP7 471 aa9.16□□□□□ -0.94
CDRT1-208ENST00000630868 SSUH2Q9Y2M2 353 aa9.16□□□□□ -0.94
CDRT1-208ENST00000630868 RNF39Q9H2S5 420 aa9.15□□□□□ -0.94
CDRT1-208ENST00000630868 OSCARQ8IYS5 282 aa9.13□□□□□ -0.95
CDRT1-208ENST00000630868 RNF25Q96BH1 459 aaPredicted RBP9.12□□□□□ -0.95
CDRT1-208ENST00000630868 PABPN1Q86U42 306 aaKnown RBP eCLIP9.11□□□□□ -0.95
CDRT1-208ENST00000630868 GTF3C3Q9Y5Q9 886 aa9.09□□□□□ -0.95
CDRT1-208ENST00000630868 SPDYE2BA6NHP3 402 aa9.08□□□□□ -0.96
CDRT1-208ENST00000630868 SPDYE6P0CI01 402 aa9.08□□□□□ -0.96
CDRT1-208ENST00000630868 NKX1-1Q15270 411 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms