RNA–Protein interactions for RNA: ENST00000628990.2

MECOM-219, Transcript of MDS1 and EVI1 complex locus, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MECOM, Length 4,835 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECOM-219ENST00000628990 NISCHQ9Y2I1 1504 aa9.92□□□□□ -0.82
MECOM-219ENST00000628990 CCDC180Q9P1Z9 1646 aa8.75□□□□□ -1.01
MECOM-219ENST00000628990 ZCCHC6Q5VYS8 1495 aaKnown RBP8.41□□□□□ -1.06
MECOM-219ENST00000628990 DCAF1Q9Y4B6 1507 aa8.38□□□□□ -1.07
MECOM-219ENST00000628990 MYO15BQ96JP2 1530 aa8.25□□□□□ -1.09
MECOM-219ENST00000628990 NACADO15069 1562 aa8.02□□□□□ -1.13
MECOM-219ENST00000628990 ABCC9O60706 1549 aa7.93□□□□□ -1.14
MECOM-219ENST00000628990 RB1CC1Q8TDY2 1594 aa7.87□□□□□ -1.15
MECOM-219ENST00000628990 SHROOM4Q9ULL8 1493 aa7.83□□□□□ -1.16
MECOM-219ENST00000628990 SLC24A1O60721 1099 aa7.8□□□□□ -1.16
MECOM-219ENST00000628990 SCRIBQ14160 1630 aa7.8□□□□□ -1.16
MECOM-219ENST00000628990 UNC13AQ9UPW8 1703 aa7.74□□□□□ -1.17
MECOM-219ENST00000628990 RSF1Q96T23 1441 aaPredicted RBP7.69□□□□□ -1.18
MECOM-219ENST00000628990 BAZ1AQ9NRL2 1556 aaPredicted RBP7.66□□□□□ -1.18
MECOM-219ENST00000628990 DCAF8L2P0C7V8 631 aa7.65□□□□□ -1.18
MECOM-219ENST00000628990 PEG3Q9GZU2 1588 aa7.63□□□□□ -1.19
MECOM-219ENST00000628990 BICRAQ9NZM4 1560 aa7.62□□□□□ -1.19
MECOM-219ENST00000628990 SMARCA4P51532 1647 aa7.61□□□□□ -1.19
MECOM-219ENST00000628990 EIF4G1Q04637 1599 aaKnown RBP7.6□□□□□ -1.19
MECOM-219ENST00000628990 MROH2BQ7Z745 1585 aa7.6□□□□□ -1.19
MECOM-219ENST00000628990 SUPT5HO00267 1087 aaKnown RBP7.59□□□□□ -1.19
MECOM-219ENST00000628990 EHMT2Q96KQ7 1210 aa7.58□□□□□ -1.2
MECOM-219ENST00000628990 TOP2AP11388 1531 aaKnown RBP7.58□□□□□ -1.2
MECOM-219ENST00000628990 CECR2Q9BXF3 1484 aa7.57□□□□□ -1.2
MECOM-219ENST00000628990 WIZO95785 1651 aa7.55□□□□□ -1.2
MECOM-219ENST00000628990 CHIC1Q5VXU3 224 aa7.53□□□□□ -1.2
MECOM-219ENST00000628990 SMARCA2P51531 1590 aa7.48□□□□□ -1.21
MECOM-219ENST00000628990 HMGXB3Q12766 1538 aa7.42□□□□□ -1.22
MECOM-219ENST00000628990 CCDC88BA6NC98 1476 aa7.4□□□□□ -1.22
MECOM-219ENST00000628990 ATAD2BQ9ULI0 1458 aa7.39□□□□□ -1.23
MECOM-219ENST00000628990 PRDM2Q13029 1718 aa7.36□□□□□ -1.23
MECOM-219ENST00000628990 NCAPD3P42695 1498 aa7.35□□□□□ -1.23
MECOM-219ENST00000628990 BAZ1BQ9UIG0 1483 aaKnown RBP7.32□□□□□ -1.24
MECOM-219ENST00000628990 EEA1Q15075 1411 aa7.32□□□□□ -1.24
MECOM-219ENST00000628990 BIVM-ERCC5R4GMW8 1640 aa7.3□□□□□ -1.24
MECOM-219ENST00000628990 TOP2BQ02880 1626 aa7.26□□□□□ -1.25
MECOM-219ENST00000628990 KIF21BO75037 1637 aa7.24□□□□□ -1.25
MECOM-219ENST00000628990 TRIM41Q8WV44 630 aa7.24□□□□□ -1.25
MECOM-219ENST00000628990 ABCC8Q09428 1581 aa7.23□□□□□ -1.25
MECOM-219ENST00000628990 SYNJ1O43426 1573 aa7.22□□□□□ -1.25
MECOM-219ENST00000628990 PLPPR3Q6T4P5 718 aa7.22□□□□□ -1.25
MECOM-219ENST00000628990 PABPN1Q86U42 306 aaKnown RBP eCLIP7.22□□□□□ -1.25
MECOM-219ENST00000628990 CFTRP13569 1480 aa7.22□□□□□ -1.25
MECOM-219ENST00000628990 WRNQ14191 1432 aaPredicted RBP eCLIP7.21□□□□□ -1.26
MECOM-219ENST00000628990 ERICH3Q5RHP9 1530 aa7.16□□□□□ -1.26
MECOM-219ENST00000628990 CC2D2AQ9P2K1 1620 aa7.16□□□□□ -1.26
MECOM-219ENST00000628990 TNIKQ9UKE5 1360 aa7.15□□□□□ -1.26
MECOM-219ENST00000628990 GOLGA3Q08378 1498 aa7.14□□□□□ -1.27
MECOM-219ENST00000628990 CEP164Q9UPV0 1460 aa7.14□□□□□ -1.27
MECOM-219ENST00000628990 CUX1P39880 1505 aa7.12□□□□□ -1.27
MECOM-219ENST00000628990 SOGA1O94964 1423 aa7.11□□□□□ -1.27
MECOM-219ENST00000628990 LAMC3Q9Y6N6 1575 aa7.1□□□□□ -1.27
MECOM-219ENST00000628990 LOC105371045A0A1W2PR82 267 aa7.1□□□□□ -1.27
MECOM-219ENST00000628990 RTN4Q9NQC3 1192 aaKnown RBP7.1□□□□□ -1.27
MECOM-219ENST00000628990 CADPSQ9ULU8 1353 aa7.09□□□□□ -1.28
MECOM-219ENST00000628990 PRXQ9BXM0 1461 aa7.09□□□□□ -1.28
MECOM-219ENST00000628990 WDR97A6NE52 1622 aa7.07□□□□□ -1.28
MECOM-219ENST00000628990 DNMBPQ6XZF7 1577 aa7.07□□□□□ -1.28
MECOM-219ENST00000628990 TRIM26Q12899 539 aaPredicted RBP7.07□□□□□ -1.28
MECOM-219ENST00000628990 CEP162Q5TB80 1403 aa7.06□□□□□ -1.28
MECOM-219ENST00000628990 RUSC2Q8N2Y8 1516 aa7.06□□□□□ -1.28
MECOM-219ENST00000628990 CSRNP3Q8WYN3 585 aa7.06□□□□□ -1.28
MECOM-219ENST00000628990 HRCP23327 699 aa7.03□□□□□ -1.28
MECOM-219ENST00000628990 KIF27Q86VH2 1401 aa7.02□□□□□ -1.28
MECOM-219ENST00000628990 CUL7Q14999 1698 aa7.02□□□□□ -1.29
MECOM-219ENST00000628990 ABCA10Q8WWZ4 1543 aa7.01□□□□□ -1.29
MECOM-219ENST00000628990 FANCD2Q9BXW9 1451 aa7□□□□□ -1.29
MECOM-219ENST00000628990 AEBP2Q6ZN18 517 aaPredicted RBP7□□□□□ -1.29
MECOM-219ENST00000628990 MAP3K1Q13233 1512 aa6.99□□□□□ -1.29
MECOM-219ENST00000628990 RAPGEF2Q9Y4G8 1499 aa6.99□□□□□ -1.29
MECOM-219ENST00000628990 ABCA5Q8WWZ7 1642 aa6.99□□□□□ -1.29
MECOM-219ENST00000628990 VPS8Q8N3P4 1428 aa6.98□□□□□ -1.29
MECOM-219ENST00000628990 FGD5Q6ZNL6 1462 aa6.98□□□□□ -1.29
MECOM-219ENST00000628990 TOPBP1Q92547 1522 aa6.98□□□□□ -1.29
MECOM-219ENST00000628990 DAXXQ9UER7 740 aaPredicted RBP6.97□□□□□ -1.29
MECOM-219ENST00000628990 PRKCSHP14314 528 aaPredicted RBP6.96□□□□□ -1.3
MECOM-219ENST00000628990 CLIP1P30622 1438 aa6.96□□□□□ -1.3
MECOM-219ENST00000628990 CTTNBP2Q8WZ74 1663 aa6.95□□□□□ -1.3
MECOM-219ENST00000628990 KIF21AQ7Z4S6 1674 aa6.95□□□□□ -1.3
MECOM-219ENST00000628990 ARAP1Q96P48 1450 aa6.95□□□□□ -1.3
MECOM-219ENST00000628990 ZEB1P37275 1124 aaPredicted RBP6.94□□□□□ -1.3
MECOM-219ENST00000628990 EFCAB5A4FU69 1503 aa6.94□□□□□ -1.3
MECOM-219ENST00000628990 TARBP1Q13395 1621 aaKnown RBP6.94□□□□□ -1.3
MECOM-219ENST00000628990 PDS5BQ9NTI5 1447 aa6.94□□□□□ -1.3
MECOM-219ENST00000628990 POLA1P09884 1462 aaPredicted RBP6.93□□□□□ -1.3
MECOM-219ENST00000628990 FAM9AQ8IZU1 332 aaPredicted RBP6.93□□□□□ -1.3
MECOM-219ENST00000628990 PCGF6Q9BYE7 350 aa6.93□□□□□ -1.3
MECOM-219ENST00000628990 URB2Q14146 1524 aaKnown RBP6.93□□□□□ -1.3
MECOM-219ENST00000628990 IGF1RP08069 1367 aa6.93□□□□□ -1.3
MECOM-219ENST00000628990 CFAP43Q8NDM7 1665 aa6.92□□□□□ -1.3
MECOM-219ENST00000628990 CUX2O14529 1486 aa6.91□□□□□ -1.3
MECOM-219ENST00000628990 AQRO60306 1485 aaKnown RBP eCLIP6.91□□□□□ -1.3
MECOM-219ENST00000628990 WDR62O43379 1518 aa6.9□□□□□ -1.3
MECOM-219ENST00000628990 SAMD9Q5K651 1589 aa6.9□□□□□ -1.31
MECOM-219ENST00000628990 PBRM1Q86U86 1689 aa6.9□□□□□ -1.31
MECOM-219ENST00000628990 THOC2Q8NI27 1593 aaKnown RBP6.89□□□□□ -1.31
MECOM-219ENST00000628990 ARHGAP35Q9NRY4 1499 aa6.89□□□□□ -1.31
MECOM-219ENST00000628990 MRC2Q9UBG0 1479 aa6.88□□□□□ -1.31
MECOM-219ENST00000628990 NESP48681 1621 aa6.88□□□□□ -1.31
MECOM-219ENST00000628990 CARMIL1Q5VZK9 1371 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms