RNA–Protein interactions for RNA: ENST00000625463.1

CHD2-204, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-204ENST00000625463 AEBP2Q6ZN18 517 aaPredicted RBP12.74□□□□□ -0.37
CHD2-204ENST00000625463 CHIC1Q5VXU3 224 aa12.62□□□□□ -0.39
CHD2-204ENST00000625463 PHF23Q9BUL5 403 aaPredicted RBP11.18□□□□□ -0.62
CHD2-204ENST00000625463 SENP3Q9H4L4 574 aaPredicted RBP10.66□□□□□ -0.7
CHD2-204ENST00000625463 PLPPR3Q6T4P5 718 aa10.32□□□□□ -0.76
CHD2-204ENST00000625463 FOXD1Q16676 465 aa9.94□□□□□ -0.82
CHD2-204ENST00000625463 ADRA2BP18089 450 aa9.79□□□□□ -0.84
CHD2-204ENST00000625463 PPP6R1Q9UPN7 881 aa9.79□□□□□ -0.84
CHD2-204ENST00000625463 MYT1Q01538 1121 aa9.71□□□□□ -0.86
CHD2-204ENST00000625463 PELP1Q8IZL8 1130 aaKnown RBP9.66□□□□□ -0.86
CHD2-204ENST00000625463 TTBK1Q5TCY1 1321 aaPredicted RBP9.45□□□□□ -0.9
CHD2-204ENST00000625463 PIAS4Q8N2W9 510 aaPredicted RBP9.41□□□□□ -0.9
CHD2-204ENST00000625463 KCNA4P22459 653 aa9.28□□□□□ -0.92
CHD2-204ENST00000625463 SLC24A1O60721 1099 aa9.24□□□□□ -0.93
CHD2-204ENST00000625463 PPP4R3CPQ6ZMV5 832 aa9.17□□□□□ -0.94
CHD2-204ENST00000625463 ERICH6Q7L0X2 663 aa9□□□□□ -0.97
CHD2-204ENST00000625463 MSH5O43196 834 aa8.98□□□□□ -0.97
CHD2-204ENST00000625463 NCBP3Q53F19 620 aaKnown RBP8.93□□□□□ -0.98
CHD2-204ENST00000625463 EHMT2Q96KQ7 1210 aa8.91□□□□□ -0.98
CHD2-204ENST00000625463 NPM3O75607 178 aaKnown RBP8.88□□□□□ -0.99
CHD2-204ENST00000625463 APLP2Q06481 763 aa8.85□□□□□ -0.99
CHD2-204ENST00000625463 SCAF1Q9H7N4 1312 aaKnown RBP8.83□□□□□ -1
CHD2-204ENST00000625463 PRKCSHP14314 528 aaPredicted RBP8.83□□□□□ -1
CHD2-204ENST00000625463 SLC4A1APQ9BWU0 796 aaKnown RBP8.83□□□□□ -1
CHD2-204ENST00000625463 MAPK8IP2Q13387 824 aaPredicted RBP8.82□□□□□ -1
CHD2-204ENST00000625463 CNKSR2Q8WXI2 1034 aa8.82□□□□□ -1
CHD2-204ENST00000625463 DAXXQ9UER7 740 aaPredicted RBP8.78□□□□□ -1
CHD2-204ENST00000625463 CSRNP3Q8WYN3 585 aa8.7□□□□□ -1.02
CHD2-204ENST00000625463 RNF216Q9NWF9 866 aaPredicted RBP8.58□□□□□ -1.04
CHD2-204ENST00000625463 DMRT2Q9Y5R5 561 aa8.58□□□□□ -1.04
CHD2-204ENST00000625463 ZBTB22O15209 634 aa8.57□□□□□ -1.04
CHD2-204ENST00000625463 DNAJC5BQ9UF47 199 aa8.51□□□□□ -1.05
CHD2-204ENST00000625463 HOXD11P31277 338 aaPredicted RBP8.5□□□□□ -1.05
CHD2-204ENST00000625463 BCL11AQ9H165 835 aa8.45□□□□□ -1.06
CHD2-204ENST00000625463 FOXD4L1Q9NU39 408 aa8.41□□□□□ -1.06
CHD2-204ENST00000625463 SLC4A2P04920 1241 aa8.35□□□□□ -1.07
CHD2-204ENST00000625463 EIF5BO60841 1220 aaKnown RBP8.34□□□□□ -1.07
CHD2-204ENST00000625463 HRCP23327 699 aa8.28□□□□□ -1.08
CHD2-204ENST00000625463 FAM9AQ8IZU1 332 aaPredicted RBP8.25□□□□□ -1.09
CHD2-204ENST00000625463 DCAF8L1A6NGE4 600 aa8.21□□□□□ -1.1
CHD2-204ENST00000625463 CENPBP07199 599 aaPredicted RBP8.21□□□□□ -1.1
CHD2-204ENST00000625463 MYCNP04198 464 aaPredicted RBP8.15□□□□□ -1.1
CHD2-204ENST00000625463 RANGAP1P46060 587 aaPredicted RBP8.15□□□□□ -1.1
CHD2-204ENST00000625463 ARXQ96QS3 562 aa8.11□□□□□ -1.11
CHD2-204ENST00000625463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.09□□□□□ -1.115e-7■■□□□ 12.6
CHD2-204ENST00000625463 ATXN8OSP0DMR3 200 aa8.05□□□□□ -1.12
CHD2-204ENST00000625463 U3KPZ7 1027 aaPredicted RBP8.03□□□□□ -1.12
CHD2-204ENST00000625463 UBE2Q2Q8WVN8 375 aa8.01□□□□□ -1.13
CHD2-204ENST00000625463 ATF5Q9Y2D1 282 aaPredicted RBP8.01□□□□□ -1.13
CHD2-204ENST00000625463 ANP32EQ9BTT0 268 aa7.96□□□□□ -1.14
CHD2-204ENST00000625463 PODXL2Q9NZ53 605 aa7.94□□□□□ -1.14
CHD2-204ENST00000625463 SAMD1Q6SPF0 538 aaPredicted RBP7.91□□□□□ -1.14
CHD2-204ENST00000625463 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.9□□□□□ -1.14
CHD2-204ENST00000625463 PLEKHG5O94827 1062 aa7.9□□□□□ -1.14
CHD2-204ENST00000625463 HNRNPUL2Q1KMD3 747 aaKnown RBP7.9□□□□□ -1.14
CHD2-204ENST00000625463 ACIN1Q9UKV3 1341 aaKnown RBP7.86□□□□□ -1.15
CHD2-204ENST00000625463 HOMEZQ8IX15 550 aa7.84□□□□□ -1.15
CHD2-204ENST00000625463 RTN4Q9NQC3 1192 aaKnown RBP7.83□□□□□ -1.16
CHD2-204ENST00000625463 FKBP8Q14318 412 aa7.82□□□□□ -1.16
CHD2-204ENST00000625463 NEFLP07196 543 aa7.81□□□□□ -1.16
CHD2-204ENST00000625463 POTEDQ86YR6 584 aa7.81□□□□□ -1.16
CHD2-204ENST00000625463 PKNOX2Q96KN3 472 aa7.8□□□□□ -1.16
CHD2-204ENST00000625463 ZNF219Q9P2Y4 722 aaPredicted RBP7.79□□□□□ -1.16
CHD2-204ENST00000625463 ZEB1P37275 1124 aaPredicted RBP7.78□□□□□ -1.16
CHD2-204ENST00000625463 KLHL34Q8N239 644 aa7.77□□□□□ -1.17
CHD2-204ENST00000625463 RNF39Q9H2S5 420 aa7.77□□□□□ -1.17
CHD2-204ENST00000625463 TIMELESSQ9UNS1 1208 aa7.77□□□□□ -1.17
CHD2-204ENST00000625463 AMER1Q5JTC6 1135 aaPredicted RBP7.76□□□□□ -1.17
CHD2-204ENST00000625463 SPINK5Q9NQ38 1064 aaPredicted RBP7.76□□□□□ -1.17
CHD2-204ENST00000625463 ERICH6BQ5W0A0 696 aa7.74□□□□□ -1.17
CHD2-204ENST00000625463 PPARGC1BQ86YN6 1023 aaKnown RBP7.73□□□□□ -1.17
CHD2-204ENST00000625463 MYT1LQ9UL68 1186 aa7.73□□□□□ -1.17
CHD2-204ENST00000625463 GTF3C3Q9Y5Q9 886 aa7.73□□□□□ -1.17
CHD2-204ENST00000625463 PDIA4P13667 645 aaKnown RBP7.71□□□□□ -1.18
CHD2-204ENST00000625463 TRHP20396 242 aaPredicted RBP7.71□□□□□ -1.18
CHD2-204ENST00000625463 ANO8Q9HCE9 1232 aaPredicted RBP7.7□□□□□ -1.18
CHD2-204ENST00000625463 PDE4CQ08493 712 aa7.67□□□□□ -1.18
CHD2-204ENST00000625463 CAPN15O75808 1086 aa7.66□□□□□ -1.18
CHD2-204ENST00000625463 MKRN4PQ13434 485 aaPredicted RBP7.66□□□□□ -1.18
CHD2-204ENST00000625463 TULP1O00294 542 aaPredicted RBP7.65□□□□□ -1.18
CHD2-204ENST00000625463 C1QBPQ07021 282 aaKnown RBP7.64□□□□□ -1.19
CHD2-204ENST00000625463 NEUROD1Q13562 356 aa7.64□□□□□ -1.19
CHD2-204ENST00000625463 POLA2Q14181 598 aa7.63□□□□□ -1.19
CHD2-204ENST00000625463 TAF7LQ5H9L4 462 aa7.6□□□□□ -1.19
CHD2-204ENST00000625463 ABCB7O75027 752 aa7.59□□□□□ -1.19
CHD2-204ENST00000625463 CLSPNQ9HAW4 1339 aa7.57□□□□□ -1.2
CHD2-204ENST00000625463 GLIPR1L2Q4G1C9 344 aa7.57□□□□□ -1.2
CHD2-204ENST00000625463 NPM2Q86SE8 214 aaKnown RBP7.57□□□□□ -1.2
CHD2-204ENST00000625463 SPDYE4A6NLX3 237 aa7.56□□□□□ -1.2
CHD2-204ENST00000625463 FBLN2P98095 1184 aa7.54□□□□□ -1.2
CHD2-204ENST00000625463 DCAF8L2P0C7V8 631 aa7.53□□□□□ -1.2
CHD2-204ENST00000625463 FGD1P98174 961 aa7.53□□□□□ -1.2
CHD2-204ENST00000625463 ZNF326Q5BKZ1 582 aaKnown RBP7.51□□□□□ -1.21
CHD2-204ENST00000625463 FBXO3Q9UK99 471 aa7.51□□□□□ -1.21
CHD2-204ENST00000625463 TAOK2Q9UL54 1235 aa7.5□□□□□ -1.21
CHD2-204ENST00000625463 SALL2Q9Y467 1007 aaPredicted RBP7.5□□□□□ -1.21
CHD2-204ENST00000625463 DSG3P32926 999 aa7.49□□□□□ -1.21
CHD2-204ENST00000625463 PCGF6Q9BYE7 350 aa7.49□□□□□ -1.21
CHD2-204ENST00000625463 BRD2P25440 801 aaKnown RBP7.47□□□□□ -1.21
CHD2-204ENST00000625463 PROM2Q8N271 834 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms