RNA–Protein interactions for RNA: ENST00000622098.4

CDK16-223, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2 BASIC

Gene CDK16, Length 2,968 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-223ENST00000622098 NISCHQ9Y2I1 1504 aa36.38■■■■□ 3.41
CDK16-223ENST00000622098 SHROOM4Q9ULL8 1493 aa31.23■■■□□ 2.59
CDK16-223ENST00000622098 CCDC180Q9P1Z9 1646 aa30.81■■■□□ 2.52
CDK16-223ENST00000622098 ZCCHC6Q5VYS8 1495 aaKnown RBP30.8■■■□□ 2.52
CDK16-223ENST00000622098 SUPT5HO00267 1087 aaKnown RBP30.71■■■□□ 2.51
CDK16-223ENST00000622098 DCAF8L2P0C7V8 631 aa30.27■■■□□ 2.44
CDK16-223ENST00000622098 CHIC1Q5VXU3 224 aa29.88■■■□□ 2.37
CDK16-223ENST00000622098 DCAF1Q9Y4B6 1507 aa29.8■■■□□ 2.36
CDK16-223ENST00000622098 MYO15BQ96JP2 1530 aa29.79■■■□□ 2.36
CDK16-223ENST00000622098 HRCP23327 699 aa29.2■■■□□ 2.27
CDK16-223ENST00000622098 PCGF6Q9BYE7 350 aa29.15■■■□□ 2.26
CDK16-223ENST00000622098 ABCC9O60706 1549 aa29.09■■■□□ 2.25
CDK16-223ENST00000622098 LOC105371045A0A1W2PR82 267 aa29.04■■■□□ 2.24
CDK16-223ENST00000622098 SCRIBQ14160 1630 aa28.99■■■□□ 2.23
CDK16-223ENST00000622098 RSF1Q96T23 1441 aaPredicted RBP28.87■■■□□ 2.21
CDK16-223ENST00000622098 PPARGC1BQ86YN6 1023 aaKnown RBP28.62■■■□□ 2.17
CDK16-223ENST00000622098 RB1CC1Q8TDY2 1594 aa28.6■■■□□ 2.17
CDK16-223ENST00000622098 TRIM41Q8WV44 630 aa28.57■■■□□ 2.16
CDK16-223ENST00000622098 TRIM26Q12899 539 aaPredicted RBP28.52■■■□□ 2.16
CDK16-223ENST00000622098 NACADO15069 1562 aa28.48■■■□□ 2.15
CDK16-223ENST00000622098 CECR2Q9BXF3 1484 aa28.41■■■□□ 2.14
CDK16-223ENST00000622098 FAM9AQ8IZU1 332 aaPredicted RBP28.38■■■□□ 2.13
CDK16-223ENST00000622098 MROH2BQ7Z745 1585 aa28.32■■■□□ 2.12
CDK16-223ENST00000622098 EHMT2Q96KQ7 1210 aa28.17■■■□□ 2.1
CDK16-223ENST00000622098 WIZO95785 1651 aa28.17■■■□□ 2.1
CDK16-223ENST00000622098 BAZ1AQ9NRL2 1556 aaPredicted RBP27.98■■■□□ 2.07
CDK16-223ENST00000622098 ZEB1P37275 1124 aaPredicted RBP27.93■■■□□ 2.06
CDK16-223ENST00000622098 EIF4G1Q04637 1599 aaKnown RBP27.81■■■□□ 2.04
CDK16-223ENST00000622098 TOP2AP11388 1531 aaKnown RBP27.7■■■□□ 2.03
CDK16-223ENST00000622098 SMARCA4P51532 1647 aa27.67■■■□□ 2.02
CDK16-223ENST00000622098 CCDC88BA6NC98 1476 aa27.63■■■□□ 2.01
CDK16-223ENST00000622098 ABCC8Q09428 1581 aa27.62■■■□□ 2.01
CDK16-223ENST00000622098 UNC13AQ9UPW8 1703 aa27.58■■■□□ 2.01
CDK16-223ENST00000622098 SMARCA2P51531 1590 aa27.57■■■□□ 2
CDK16-223ENST00000622098 SOGA1O94964 1423 aa27.4■■□□□ 1.98
CDK16-223ENST00000622098 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.39■■□□□ 1.98
CDK16-223ENST00000622098 PABPN1Q86U42 306 aaKnown RBP eCLIP27.36■■□□□ 1.972e-6■■□□□ 12.2
CDK16-223ENST00000622098 CEP162Q5TB80 1403 aa27.34■■□□□ 1.97
CDK16-223ENST00000622098 CCER1Q8TC90 406 aaPredicted RBP27.33■■□□□ 1.96
CDK16-223ENST00000622098 WRNQ14191 1432 aaPredicted RBP eCLIP27.31■■□□□ 1.96
CDK16-223ENST00000622098 TTBK1Q5TCY1 1321 aaPredicted RBP27.3■■□□□ 1.96
CDK16-223ENST00000622098 TNIKQ9UKE5 1360 aa27.26■■□□□ 1.95
CDK16-223ENST00000622098 CSRNP3Q8WYN3 585 aa27.26■■□□□ 1.95
CDK16-223ENST00000622098 RUSC2Q8N2Y8 1516 aa27.25■■□□□ 1.95
CDK16-223ENST00000622098 BICRAQ9NZM4 1560 aa27.24■■□□□ 1.95
CDK16-223ENST00000622098 EEA1Q15075 1411 aa27.23■■□□□ 1.95
CDK16-223ENST00000622098 UBTFP17480 764 aaKnown RBP27.21■■□□□ 1.95
CDK16-223ENST00000622098 PEG3Q9GZU2 1588 aa27.1■■□□□ 1.93
CDK16-223ENST00000622098 GOLGA3Q08378 1498 aa27.08■■□□□ 1.93
CDK16-223ENST00000622098 SCAF1Q9H7N4 1312 aaKnown RBP27■■□□□ 1.91
CDK16-223ENST00000622098 SYNJ1O43426 1573 aa26.98■■□□□ 1.91
CDK16-223ENST00000622098 ATAD2BQ9ULI0 1458 aa26.95■■□□□ 1.9
CDK16-223ENST00000622098 CEP164Q9UPV0 1460 aa26.91■■□□□ 1.9
CDK16-223ENST00000622098 BAZ1BQ9UIG0 1483 aaKnown RBP26.9■■□□□ 1.9
CDK16-223ENST00000622098 DIEXFQ68CQ4 756 aaKnown RBP26.85■■□□□ 1.89
CDK16-223ENST00000622098 KIF21BO75037 1637 aa26.85■■□□□ 1.89
CDK16-223ENST00000622098 CLIP1P30622 1438 aa26.8■■□□□ 1.88
CDK16-223ENST00000622098 RAPGEF2Q9Y4G8 1499 aa26.72■■□□□ 1.87
CDK16-223ENST00000622098 ACIN1Q9UKV3 1341 aaKnown RBP26.7■■□□□ 1.86
CDK16-223ENST00000622098 HNRNPUL2Q1KMD3 747 aaKnown RBP26.7■■□□□ 1.86
CDK16-223ENST00000622098 VPS8Q8N3P4 1428 aa26.69■■□□□ 1.86
CDK16-223ENST00000622098 RANGAP1P46060 587 aaPredicted RBP26.67■■□□□ 1.86
CDK16-223ENST00000622098 NEUROD1Q13562 356 aa26.67■■□□□ 1.86
CDK16-223ENST00000622098 APLP2Q06481 763 aa26.63■■□□□ 1.85
CDK16-223ENST00000622098 TOP2BQ02880 1626 aa26.62■■□□□ 1.85
CDK16-223ENST00000622098 ZNF316A6NFI3 1004 aaPredicted RBP26.6■■□□□ 1.85
CDK16-223ENST00000622098 CENPBP07199 599 aaPredicted RBP26.54■■□□□ 1.84
CDK16-223ENST00000622098 PELP1Q8IZL8 1130 aaKnown RBP26.54■■□□□ 1.84
CDK16-223ENST00000622098 BIVM-ERCC5R4GMW8 1640 aa26.49■■□□□ 1.83
CDK16-223ENST00000622098 GTF3C3Q9Y5Q9 886 aa26.42■■□□□ 1.82
CDK16-223ENST00000622098 PRXQ9BXM0 1461 aa26.41■■□□□ 1.82
CDK16-223ENST00000622098 ERICH3Q5RHP9 1530 aa26.39■■□□□ 1.82
CDK16-223ENST00000622098 NCAPD3P42695 1498 aa26.38■■□□□ 1.81
CDK16-223ENST00000622098 HMGXB3Q12766 1538 aa26.37■■□□□ 1.81
CDK16-223ENST00000622098 CUX1P39880 1505 aa26.34■■□□□ 1.81
CDK16-223ENST00000622098 ARAP1Q96P48 1450 aa26.33■■□□□ 1.81
CDK16-223ENST00000622098 KIF27Q86VH2 1401 aa26.28■■□□□ 1.8
CDK16-223ENST00000622098 YTHDC1Q96MU7 727 aaKnown RBP26.27■■□□□ 1.8
CDK16-223ENST00000622098 KANK4Q5T7N3 995 aaPredicted RBP26.26■■□□□ 1.79
CDK16-223ENST00000622098 MIER1Q8N108 512 aa26.25■■□□□ 1.79
CDK16-223ENST00000622098 CFTRP13569 1480 aa26.22■■□□□ 1.79
CDK16-223ENST00000622098 DHX57Q6P158 1386 aaKnown RBP26.15■■□□□ 1.78
CDK16-223ENST00000622098 CLSPNQ9HAW4 1339 aa26.12■■□□□ 1.77
CDK16-223ENST00000622098 ARHGAP35Q9NRY4 1499 aa26.09■■□□□ 1.77
CDK16-223ENST00000622098 RRBP1Q9P2E9 1410 aaKnown RBP26.08■■□□□ 1.76
CDK16-223ENST00000622098 CUX2O14529 1486 aa26.01■■□□□ 1.75
CDK16-223ENST00000622098 CCNB3Q8WWL7 1395 aa25.99■■□□□ 1.75
CDK16-223ENST00000622098 IGF1RP08069 1367 aa25.98■■□□□ 1.75
CDK16-223ENST00000622098 ITGAEP38570 1179 aa25.96■■□□□ 1.75
CDK16-223ENST00000622098 PRDM2Q13029 1718 aa25.96■■□□□ 1.75
CDK16-223ENST00000622098 CADPSQ9ULU8 1353 aa25.92■■□□□ 1.74
CDK16-223ENST00000622098 CARMIL1Q5VZK9 1371 aa25.88■■□□□ 1.73
CDK16-223ENST00000622098 FGD5Q6ZNL6 1462 aa25.87■■□□□ 1.73
CDK16-223ENST00000622098 TIAM1Q13009 1591 aa25.81■■□□□ 1.72
CDK16-223ENST00000622098 RAB3GAP2Q9H2M9 1393 aa25.78■■□□□ 1.72
CDK16-223ENST00000622098 MAP3K1Q13233 1512 aa25.76■■□□□ 1.71
CDK16-223ENST00000622098 LRRC9Q6ZRR7 1453 aa25.73■■□□□ 1.71
CDK16-223ENST00000622098 P3H3Q8IVL6 736 aa25.72■■□□□ 1.71
CDK16-223ENST00000622098 PHLDB1Q86UU1 1377 aa25.7■■□□□ 1.7
CDK16-223ENST00000622098 FHAD1B1AJZ9 1412 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms