RNA–Protein interactions for RNA: ENST00000617502.4

SPTBN2-211, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

TSL 5 BASIC

Gene SPTBN2, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-211ENST00000617502 NISCHQ9Y2I1 1504 aa23.21■■□□□ 1.31
SPTBN2-211ENST00000617502 SHROOM4Q9ULL8 1493 aa20.2■□□□□ 0.82
SPTBN2-211ENST00000617502 DCAF8L2P0C7V8 631 aa20.07■□□□□ 0.8
SPTBN2-211ENST00000617502 SUPT5HO00267 1087 aaKnown RBP19.89■□□□□ 0.77
SPTBN2-211ENST00000617502 CCDC180Q9P1Z9 1646 aa19.57■□□□□ 0.72
SPTBN2-211ENST00000617502 ZCCHC6Q5VYS8 1495 aaKnown RBP19.54■□□□□ 0.72
SPTBN2-211ENST00000617502 CHIC1Q5VXU3 224 aa19■□□□□ 0.63
SPTBN2-211ENST00000617502 DCAF1Q9Y4B6 1507 aa18.87■□□□□ 0.61
SPTBN2-211ENST00000617502 ABCC9O60706 1549 aa18.69■□□□□ 0.58
SPTBN2-211ENST00000617502 MYO15BQ96JP2 1530 aa18.63■□□□□ 0.57
SPTBN2-211ENST00000617502 SCRIBQ14160 1630 aa18.62■□□□□ 0.57
SPTBN2-211ENST00000617502 PCGF6Q9BYE7 350 aa18.55■□□□□ 0.56
SPTBN2-211ENST00000617502 LOC105371045A0A1W2PR82 267 aa18.55■□□□□ 0.56
SPTBN2-211ENST00000617502 TRIM41Q8WV44 630 aa18.48■□□□□ 0.55
SPTBN2-211ENST00000617502 FAM9AQ8IZU1 332 aaPredicted RBP18.46■□□□□ 0.54
SPTBN2-211ENST00000617502 EHMT2Q96KQ7 1210 aa18.42■□□□□ 0.54
SPTBN2-211ENST00000617502 RSF1Q96T23 1441 aaPredicted RBP18.41■□□□□ 0.54
SPTBN2-211ENST00000617502 NACADO15069 1562 aa18.3■□□□□ 0.52
SPTBN2-211ENST00000617502 HRCP23327 699 aa18.28■□□□□ 0.52
SPTBN2-211ENST00000617502 CECR2Q9BXF3 1484 aa18.19■□□□□ 0.5
SPTBN2-211ENST00000617502 RB1CC1Q8TDY2 1594 aa18.12■□□□□ 0.49
SPTBN2-211ENST00000617502 TRIM26Q12899 539 aaPredicted RBP18.1■□□□□ 0.49
SPTBN2-211ENST00000617502 MROH2BQ7Z745 1585 aa18.06■□□□□ 0.48
SPTBN2-211ENST00000617502 PABPN1Q86U42 306 aaKnown RBP eCLIP18.02■□□□□ 0.48
SPTBN2-211ENST00000617502 PELP1Q8IZL8 1130 aaKnown RBP17.99■□□□□ 0.47
SPTBN2-211ENST00000617502 PPARGC1BQ86YN6 1023 aaKnown RBP17.99■□□□□ 0.47
SPTBN2-211ENST00000617502 WIZO95785 1651 aa17.91■□□□□ 0.46
SPTBN2-211ENST00000617502 BAZ1AQ9NRL2 1556 aaPredicted RBP17.88■□□□□ 0.45
SPTBN2-211ENST00000617502 TTBK1Q5TCY1 1321 aaPredicted RBP17.79■□□□□ 0.44
SPTBN2-211ENST00000617502 ZEB1P37275 1124 aaPredicted RBP17.74■□□□□ 0.43
SPTBN2-211ENST00000617502 UBTFP17480 764 aaKnown RBP17.74■□□□□ 0.43
SPTBN2-211ENST00000617502 CCDC88BA6NC98 1476 aa17.66■□□□□ 0.42
SPTBN2-211ENST00000617502 SMARCA4P51532 1647 aa17.65■□□□□ 0.42
SPTBN2-211ENST00000617502 MYT1Q01538 1121 aa17.64■□□□□ 0.42
SPTBN2-211ENST00000617502 TOP2AP11388 1531 aaKnown RBP17.64■□□□□ 0.41
SPTBN2-211ENST00000617502 ABCC8Q09428 1581 aa17.59■□□□□ 0.41
SPTBN2-211ENST00000617502 CSRNP3Q8WYN3 585 aa17.57■□□□□ 0.4
SPTBN2-211ENST00000617502 CCER1Q8TC90 406 aaPredicted RBP17.56■□□□□ 0.4
SPTBN2-211ENST00000617502 RANGAP1P46060 587 aaPredicted RBP17.54■□□□□ 0.4
SPTBN2-211ENST00000617502 SMARCA2P51531 1590 aa17.5■□□□□ 0.39
SPTBN2-211ENST00000617502 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.49■□□□□ 0.39
SPTBN2-211ENST00000617502 SOGA1O94964 1423 aa17.48■□□□□ 0.39
SPTBN2-211ENST00000617502 UNC13AQ9UPW8 1703 aa17.46■□□□□ 0.39
SPTBN2-211ENST00000617502 APLP2Q06481 763 aa17.45■□□□□ 0.38
SPTBN2-211ENST00000617502 WRNQ14191 1432 aaPredicted RBP eCLIP17.43■□□□□ 0.389e-6■■■■■ 50.1
SPTBN2-211ENST00000617502 CEP162Q5TB80 1403 aa17.4■□□□□ 0.38
SPTBN2-211ENST00000617502 BAZ1BQ9UIG0 1483 aaKnown RBP17.4■□□□□ 0.38
SPTBN2-211ENST00000617502 BICRAQ9NZM4 1560 aa17.38■□□□□ 0.37
SPTBN2-211ENST00000617502 EEA1Q15075 1411 aa17.38■□□□□ 0.37
SPTBN2-211ENST00000617502 TNIKQ9UKE5 1360 aa17.35■□□□□ 0.37
SPTBN2-211ENST00000617502 EIF4G1Q04637 1599 aaKnown RBP17.34■□□□□ 0.37
SPTBN2-211ENST00000617502 RUSC2Q8N2Y8 1516 aa17.33■□□□□ 0.37
SPTBN2-211ENST00000617502 ATAD2BQ9ULI0 1458 aa17.33■□□□□ 0.36
SPTBN2-211ENST00000617502 GOLGA3Q08378 1498 aa17.29■□□□□ 0.36
SPTBN2-211ENST00000617502 HNRNPUL2Q1KMD3 747 aaKnown RBP17.25■□□□□ 0.35
SPTBN2-211ENST00000617502 CEP164Q9UPV0 1460 aa17.19■□□□□ 0.34
SPTBN2-211ENST00000617502 CLIP1P30622 1438 aa17.18■□□□□ 0.34
SPTBN2-211ENST00000617502 SLC24A1O60721 1099 aa17.16■□□□□ 0.34
SPTBN2-211ENST00000617502 PEG3Q9GZU2 1588 aa17.15■□□□□ 0.34
SPTBN2-211ENST00000617502 SYNJ1O43426 1573 aa17.11■□□□□ 0.33
SPTBN2-211ENST00000617502 DIEXFQ68CQ4 756 aaKnown RBP17.04■□□□□ 0.32
SPTBN2-211ENST00000617502 RAPGEF2Q9Y4G8 1499 aa17.04■□□□□ 0.32
SPTBN2-211ENST00000617502 VPS8Q8N3P4 1428 aa16.98■□□□□ 0.31
SPTBN2-211ENST00000617502 NCAPD3P42695 1498 aa16.97■□□□□ 0.31
SPTBN2-211ENST00000617502 ATP1B4Q9UN42 357 aaPredicted RBP16.96■□□□□ 0.31
SPTBN2-211ENST00000617502 KIF27Q86VH2 1401 aa16.95■□□□□ 0.3
SPTBN2-211ENST00000617502 ITGAEP38570 1179 aa16.94■□□□□ 0.3
SPTBN2-211ENST00000617502 KIF21BO75037 1637 aa16.93■□□□□ 0.3
SPTBN2-211ENST00000617502 CENPBP07199 599 aaPredicted RBP16.9■□□□□ 0.3
SPTBN2-211ENST00000617502 TOP2BQ02880 1626 aa16.89■□□□□ 0.29
SPTBN2-211ENST00000617502 ZNF316A6NFI3 1004 aaPredicted RBP16.89■□□□□ 0.29
SPTBN2-211ENST00000617502 HMGXB3Q12766 1538 aa16.87■□□□□ 0.29
SPTBN2-211ENST00000617502 SCAF1Q9H7N4 1312 aaKnown RBP16.84■□□□□ 0.29
SPTBN2-211ENST00000617502 YTHDC1Q96MU7 727 aaKnown RBP16.82■□□□□ 0.28
SPTBN2-211ENST00000617502 CFTRP13569 1480 aa16.82■□□□□ 0.28
SPTBN2-211ENST00000617502 P3H3Q8IVL6 736 aa16.81■□□□□ 0.28
SPTBN2-211ENST00000617502 CUX2O14529 1486 aa16.81■□□□□ 0.28
SPTBN2-211ENST00000617502 CUX1P39880 1505 aa16.8■□□□□ 0.28
SPTBN2-211ENST00000617502 KANK4Q5T7N3 995 aaPredicted RBP16.8■□□□□ 0.28
SPTBN2-211ENST00000617502 CADPSQ9ULU8 1353 aa16.8■□□□□ 0.28
SPTBN2-211ENST00000617502 PRXQ9BXM0 1461 aa16.77■□□□□ 0.28
SPTBN2-211ENST00000617502 ACIN1Q9UKV3 1341 aaKnown RBP16.73■□□□□ 0.27
SPTBN2-211ENST00000617502 CARMIL1Q5VZK9 1371 aa16.73■□□□□ 0.27
SPTBN2-211ENST00000617502 ERICH3Q5RHP9 1530 aa16.72■□□□□ 0.27
SPTBN2-211ENST00000617502 BIVM-ERCC5R4GMW8 1640 aa16.72■□□□□ 0.27
SPTBN2-211ENST00000617502 FAM50AQ14320 339 aaKnown RBP16.71■□□□□ 0.27
SPTBN2-211ENST00000617502 NEUROD1Q13562 356 aa16.7■□□□□ 0.26
SPTBN2-211ENST00000617502 IGF1RP08069 1367 aa16.68■□□□□ 0.26
SPTBN2-211ENST00000617502 ARAP1Q96P48 1450 aa16.68■□□□□ 0.26
SPTBN2-211ENST00000617502 PRKCSHP14314 528 aaPredicted RBP16.66■□□□□ 0.26
SPTBN2-211ENST00000617502 FGD5Q6ZNL6 1462 aa16.64■□□□□ 0.25
SPTBN2-211ENST00000617502 GTF3C3Q9Y5Q9 886 aa16.62■□□□□ 0.25
SPTBN2-211ENST00000617502 CCNB3Q8WWL7 1395 aa16.62■□□□□ 0.25
SPTBN2-211ENST00000617502 FANCD2Q9BXW9 1451 aa16.61■□□□□ 0.25
SPTBN2-211ENST00000617502 MIER1Q8N108 512 aa16.6■□□□□ 0.25
SPTBN2-211ENST00000617502 ARHGAP35Q9NRY4 1499 aa16.59■□□□□ 0.25
SPTBN2-211ENST00000617502 CC2D2AQ9P2K1 1620 aa16.59■□□□□ 0.25
SPTBN2-211ENST00000617502 CLSPNQ9HAW4 1339 aa16.56■□□□□ 0.24
SPTBN2-211ENST00000617502 DHX57Q6P158 1386 aaKnown RBP16.53■□□□□ 0.24
SPTBN2-211ENST00000617502 RAD54L2Q9Y4B4 1467 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms