RNA–Protein interactions for RNA: ENST00000611776.4

ABCA13-208, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 1 (best)

Gene ABCA13, Length 7,250 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-208ENST00000611776 DCAF8L2P0C7V8 631 aa13.4□□□□□ -0.26
ABCA13-208ENST00000611776 FAM9AQ8IZU1 332 aaPredicted RBP11.87□□□□□ -0.51
ABCA13-208ENST00000611776 MYT1LQ9UL68 1186 aa11.67□□□□□ -0.54
ABCA13-208ENST00000611776 EHMT2Q96KQ7 1210 aa11.65□□□□□ -0.55
ABCA13-208ENST00000611776 TTBK1Q5TCY1 1321 aaPredicted RBP11.63□□□□□ -0.55
ABCA13-208ENST00000611776 CHIC1Q5VXU3 224 aa11.55□□□□□ -0.56
ABCA13-208ENST00000611776 ATP1B4Q9UN42 357 aaPredicted RBP11.46□□□□□ -0.57
ABCA13-208ENST00000611776 RANGAP1P46060 587 aaPredicted RBP11.4□□□□□ -0.58
ABCA13-208ENST00000611776 PLPPR3Q6T4P5 718 aa11.4□□□□□ -0.58
ABCA13-208ENST00000611776 AEBP2Q6ZN18 517 aaPredicted RBP11.3□□□□□ -0.6
ABCA13-208ENST00000611776 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.24□□□□□ -0.61
ABCA13-208ENST00000611776 HNRNPUL2Q1KMD3 747 aaKnown RBP11.24□□□□□ -0.61
ABCA13-208ENST00000611776 SUPT5HO00267 1087 aaKnown RBP11.23□□□□□ -0.61
ABCA13-208ENST00000611776 SHROOM4Q9ULL8 1493 aa11.19□□□□□ -0.62
ABCA13-208ENST00000611776 FBLN2P98095 1184 aa11.14□□□□□ -0.63
ABCA13-208ENST00000611776 APLP2Q06481 763 aa11.1□□□□□ -0.63
ABCA13-208ENST00000611776 TRHP20396 242 aaPredicted RBP11.09□□□□□ -0.63
ABCA13-208ENST00000611776 TRIM41Q8WV44 630 aa11.08□□□□□ -0.64
ABCA13-208ENST00000611776 NISCHQ9Y2I1 1504 aa11.03□□□□□ -0.64
ABCA13-208ENST00000611776 BCANQ96GW7 911 aa11.01□□□□□ -0.65
ABCA13-208ENST00000611776 PABPN1Q86U42 306 aaKnown RBP eCLIP10.97□□□□□ -0.65
ABCA13-208ENST00000611776 SENP3Q9H4L4 574 aaPredicted RBP10.97□□□□□ -0.65
ABCA13-208ENST00000611776 ESF1Q9H501 851 aaKnown RBP10.88□□□□□ -0.67
ABCA13-208ENST00000611776 SCAF1Q9H7N4 1312 aaKnown RBP10.86□□□□□ -0.67
ABCA13-208ENST00000611776 SLC4A1APQ9BWU0 796 aaKnown RBP10.85□□□□□ -0.67
ABCA13-208ENST00000611776 ABCC9O60706 1549 aa10.79□□□□□ -0.68
ABCA13-208ENST00000611776 A0A0G2JS52 829 aa10.79□□□□□ -0.68
ABCA13-208ENST00000611776 NPM1P06748 294 aaKnown RBP eCLIP10.76□□□□□ -0.69
ABCA13-208ENST00000611776 SLC24A1O60721 1099 aa10.67□□□□□ -0.7
ABCA13-208ENST00000611776 PLEKHG5O94827 1062 aa10.66□□□□□ -0.7
ABCA13-208ENST00000611776 PHF23Q9BUL5 403 aaPredicted RBP10.61□□□□□ -0.71
ABCA13-208ENST00000611776 ARID4BQ4LE39 1312 aaPredicted RBP10.61□□□□□ -0.71
ABCA13-208ENST00000611776 PELP1Q8IZL8 1130 aaKnown RBP10.59□□□□□ -0.71
ABCA13-208ENST00000611776 MYT1Q01538 1121 aa10.59□□□□□ -0.71
ABCA13-208ENST00000611776 UBTFP17480 764 aaKnown RBP10.57□□□□□ -0.72
ABCA13-208ENST00000611776 STAG3Q9UJ98 1225 aa10.55□□□□□ -0.72
ABCA13-208ENST00000611776 POLR3GLQ9BT43 218 aa10.55□□□□□ -0.72
ABCA13-208ENST00000611776 PCGF6Q9BYE7 350 aa10.55□□□□□ -0.72
ABCA13-208ENST00000611776 ARID3CA6NKF2 412 aa10.52□□□□□ -0.72
ABCA13-208ENST00000611776 C14orf37Q86TY3 774 aa10.51□□□□□ -0.73
ABCA13-208ENST00000611776 HAP1P54257 671 aaPredicted RBP10.49□□□□□ -0.73
ABCA13-208ENST00000611776 CNGB1Q14028 1251 aaPredicted RBP10.45□□□□□ -0.74
ABCA13-208ENST00000611776 DCAF8L1A6NGE4 600 aa10.43□□□□□ -0.74
ABCA13-208ENST00000611776 ERICH6Q7L0X2 663 aa10.41□□□□□ -0.74
ABCA13-208ENST00000611776 ITGAEP38570 1179 aa10.4□□□□□ -0.75
ABCA13-208ENST00000611776 ZBTB7CA1YPR0 619 aa10.39□□□□□ -0.75
ABCA13-208ENST00000611776 CHGAP10645 457 aaKnown RBP10.35□□□□□ -0.75
ABCA13-208ENST00000611776 ZNF777Q9ULD5 760 aaPredicted RBP10.25□□□□□ -0.77
ABCA13-208ENST00000611776 ERCC6Q03468 1493 aa10.23□□□□□ -0.77
ABCA13-208ENST00000611776 PPARGC1BQ86YN6 1023 aaKnown RBP10.22□□□□□ -0.77
ABCA13-208ENST00000611776 CHMP7Q8WUX9 453 aaPredicted RBP10.21□□□□□ -0.77
ABCA13-208ENST00000611776 MLECQ14165 292 aa10.21□□□□□ -0.77
ABCA13-208ENST00000611776 BCL11AQ9H165 835 aa10.19□□□□□ -0.78
ABCA13-208ENST00000611776 LMOD2Q6P5Q4 547 aa10.19□□□□□ -0.78
ABCA13-208ENST00000611776 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.19□□□□□ -0.78
ABCA13-208ENST00000611776 CCDC9Q9Y3X0 531 aaKnown RBP10.18□□□□□ -0.78
ABCA13-208ENST00000611776 MEX3CQ5U5Q3 659 aaKnown RBP10.17□□□□□ -0.78
ABCA13-208ENST00000611776 KCNH8Q96L42 1107 aa10.17□□□□□ -0.78
ABCA13-208ENST00000611776 NPHP1O15259 732 aa10.17□□□□□ -0.78
ABCA13-208ENST00000611776 YTHDC1Q96MU7 727 aaKnown RBP10.17□□□□□ -0.78
ABCA13-208ENST00000611776 NPM2Q86SE8 214 aaKnown RBP10.16□□□□□ -0.78
ABCA13-208ENST00000611776 KLHL34Q8N239 644 aa10.15□□□□□ -0.78
ABCA13-208ENST00000611776 ARXQ96QS3 562 aa10.14□□□□□ -0.79
ABCA13-208ENST00000611776 PPP1R15AO75807 674 aaPredicted RBP10.13□□□□□ -0.79
ABCA13-208ENST00000611776 P3H3Q8IVL6 736 aa10.12□□□□□ -0.79
ABCA13-208ENST00000611776 TRIM52Q96A61 297 aa10.11□□□□□ -0.79
ABCA13-208ENST00000611776 CCER1Q8TC90 406 aaPredicted RBP10.09□□□□□ -0.79
ABCA13-208ENST00000611776 ZNF326Q5BKZ1 582 aaKnown RBP10.08□□□□□ -0.8
ABCA13-208ENST00000611776 FOXD1Q16676 465 aa10.06□□□□□ -0.8
ABCA13-208ENST00000611776 CYB5RLQ6IPT4 315 aa10.04□□□□□ -0.8
ABCA13-208ENST00000611776 FAM50AQ14320 339 aaKnown RBP10.02□□□□□ -0.81
ABCA13-208ENST00000611776 LOC105371045A0A1W2PR82 267 aa10.01□□□□□ -0.81
ABCA13-208ENST00000611776 ZBTB4Q9P1Z0 1013 aaPredicted RBP10□□□□□ -0.81
ABCA13-208ENST00000611776 HRCP23327 699 aa10□□□□□ -0.81
ABCA13-208ENST00000611776 CENPBP07199 599 aaPredicted RBP9.99□□□□□ -0.81
ABCA13-208ENST00000611776 NEFMP07197 916 aa9.95□□□□□ -0.82
ABCA13-208ENST00000611776 MSH5O43196 834 aa9.94□□□□□ -0.82
ABCA13-208ENST00000611776 CFAP44Q96MT7 982 aa9.94□□□□□ -0.82
ABCA13-208ENST00000611776 SF3B2Q13435 895 aaKnown RBP9.91□□□□□ -0.82
ABCA13-208ENST00000611776 NCBP3Q53F19 620 aaKnown RBP9.9□□□□□ -0.82
ABCA13-208ENST00000611776 PPP1R1BQ9UD71 204 aaPredicted RBP9.89□□□□□ -0.83
ABCA13-208ENST00000611776 ZEB1P37275 1124 aaPredicted RBP9.88□□□□□ -0.83
ABCA13-208ENST00000611776 PIP4K2BP78356 416 aa9.88□□□□□ -0.83
ABCA13-208ENST00000611776 DAXXQ9UER7 740 aaPredicted RBP9.87□□□□□ -0.83
ABCA13-208ENST00000611776 CDK11AQ9UQ88 783 aaPredicted RBP9.87□□□□□ -0.83
ABCA13-208ENST00000611776 TULP1O00294 542 aaPredicted RBP9.85□□□□□ -0.83
ABCA13-208ENST00000611776 TRIM26Q12899 539 aaPredicted RBP9.84□□□□□ -0.83
ABCA13-208ENST00000611776 ZBTB47Q9UFB7 747 aaPredicted RBP9.83□□□□□ -0.84
ABCA13-208ENST00000611776 KRI1Q8N9T8 703 aaKnown RBP9.79□□□□□ -0.84
ABCA13-208ENST00000611776 OSCARQ8IYS5 282 aa9.75□□□□□ -0.85
ABCA13-208ENST00000611776 TMX4Q9H1E5 349 aaPredicted RBP9.75□□□□□ -0.85
ABCA13-208ENST00000611776 CSB-PGBD3P0DP91 1061 aa9.7□□□□□ -0.86
ABCA13-208ENST00000611776 SOX12O15370 315 aa9.69□□□□□ -0.86
ABCA13-208ENST00000611776 NUTM2BA6NNL0 878 aaPredicted RBP9.68□□□□□ -0.86
ABCA13-208ENST00000611776 NUTM2EB1AL46 878 aaPredicted RBP9.68□□□□□ -0.86
ABCA13-208ENST00000611776 NUTM2AQ8IVF1 878 aaPredicted RBP9.68□□□□□ -0.86
ABCA13-208ENST00000611776 NUTM2DQ5VT03 806 aaPredicted RBP9.68□□□□□ -0.86
ABCA13-208ENST00000611776 CLSPNQ9HAW4 1339 aa9.68□□□□□ -0.86
ABCA13-208ENST00000611776 G3V3G9 751 aa9.67□□□□□ -0.86
ABCA13-208ENST00000611776 PAK3O75914 559 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms