RNA–Protein interactions for RNA: ENST00000611379.1

TRIM46-211, Transcript of tripartite motif containing 46, humanhuman

TSL 1 (best) BASIC

Gene TRIM46, Length 3,082 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-211ENST00000611379 NISCHQ9Y2I1 1504 aa33.49■■■□□ 2.95
TRIM46-211ENST00000611379 SHROOM4Q9ULL8 1493 aa28.5■■■□□ 2.15
TRIM46-211ENST00000611379 CCDC180Q9P1Z9 1646 aa28.49■■■□□ 2.15
TRIM46-211ENST00000611379 ZCCHC6Q5VYS8 1495 aaKnown RBP28.26■■■□□ 2.11
TRIM46-211ENST00000611379 DCAF8L2P0C7V8 631 aa28.04■■■□□ 2.08
TRIM46-211ENST00000611379 SUPT5HO00267 1087 aaKnown RBP27.9■■■□□ 2.06
TRIM46-211ENST00000611379 DCAF1Q9Y4B6 1507 aa27.45■■□□□ 1.98
TRIM46-211ENST00000611379 CHIC1Q5VXU3 224 aa26.97■■□□□ 1.91
TRIM46-211ENST00000611379 MYO15BQ96JP2 1530 aa26.73■■□□□ 1.87
TRIM46-211ENST00000611379 SCRIBQ14160 1630 aa26.73■■□□□ 1.87
TRIM46-211ENST00000611379 ABCC9O60706 1549 aa26.7■■□□□ 1.86
TRIM46-211ENST00000611379 NACADO15069 1562 aa26.47■■□□□ 1.83
TRIM46-211ENST00000611379 RSF1Q96T23 1441 aaPredicted RBP26.45■■□□□ 1.82
TRIM46-211ENST00000611379 LOC105371045A0A1W2PR82 267 aa26.19■■□□□ 1.78
TRIM46-211ENST00000611379 CECR2Q9BXF3 1484 aa26.15■■□□□ 1.78
TRIM46-211ENST00000611379 RB1CC1Q8TDY2 1594 aa26.08■■□□□ 1.77
TRIM46-211ENST00000611379 MROH2BQ7Z745 1585 aa26.02■■□□□ 1.76
TRIM46-211ENST00000611379 TRIM41Q8WV44 630 aa26.01■■□□□ 1.75
TRIM46-211ENST00000611379 PCGF6Q9BYE7 350 aa25.96■■□□□ 1.75
TRIM46-211ENST00000611379 WIZO95785 1651 aa25.84■■□□□ 1.73
TRIM46-211ENST00000611379 FAM9AQ8IZU1 332 aaPredicted RBP25.8■■□□□ 1.72
TRIM46-211ENST00000611379 HRCP23327 699 aa25.77■■□□□ 1.72
TRIM46-211ENST00000611379 BAZ1AQ9NRL2 1556 aaPredicted RBP25.74■■□□□ 1.71
TRIM46-211ENST00000611379 EHMT2Q96KQ7 1210 aa25.6■■□□□ 1.69
TRIM46-211ENST00000611379 PABPN1Q86U42 306 aaKnown RBP eCLIP25.56■■□□□ 1.68
TRIM46-211ENST00000611379 UNC13AQ9UPW8 1703 aa25.54■■□□□ 1.68
TRIM46-211ENST00000611379 SMARCA4P51532 1647 aa25.51■■□□□ 1.67
TRIM46-211ENST00000611379 TRIM26Q12899 539 aaPredicted RBP25.51■■□□□ 1.67
TRIM46-211ENST00000611379 TOP2AP11388 1531 aaKnown RBP25.45■■□□□ 1.66
TRIM46-211ENST00000611379 CCDC88BA6NC98 1476 aa25.38■■□□□ 1.65
TRIM46-211ENST00000611379 BICRAQ9NZM4 1560 aa25.32■■□□□ 1.64
TRIM46-211ENST00000611379 EIF4G1Q04637 1599 aaKnown RBP25.32■■□□□ 1.64
TRIM46-211ENST00000611379 SMARCA2P51531 1590 aa25.29■■□□□ 1.64
TRIM46-211ENST00000611379 PPARGC1BQ86YN6 1023 aaKnown RBP25.27■■□□□ 1.64
TRIM46-211ENST00000611379 ABCC8Q09428 1581 aa25.21■■□□□ 1.63
TRIM46-211ENST00000611379 PEG3Q9GZU2 1588 aa25.01■■□□□ 1.59
TRIM46-211ENST00000611379 SOGA1O94964 1423 aa24.99■■□□□ 1.59
TRIM46-211ENST00000611379 ATAD2BQ9ULI0 1458 aa24.97■■□□□ 1.59
TRIM46-211ENST00000611379 CSRNP3Q8WYN3 585 aa24.91■■□□□ 1.58
TRIM46-211ENST00000611379 BAZ1BQ9UIG0 1483 aaKnown RBP24.91■■□□□ 1.58
TRIM46-211ENST00000611379 WRNQ14191 1432 aaPredicted RBP eCLIP24.88■■□□□ 1.57
TRIM46-211ENST00000611379 ZEB1P37275 1124 aaPredicted RBP24.87■■□□□ 1.57
TRIM46-211ENST00000611379 RUSC2Q8N2Y8 1516 aa24.85■■□□□ 1.57
TRIM46-211ENST00000611379 UBTFP17480 764 aaKnown RBP24.84■■□□□ 1.57
TRIM46-211ENST00000611379 EEA1Q15075 1411 aa24.83■■□□□ 1.57
TRIM46-211ENST00000611379 CEP162Q5TB80 1403 aa24.77■■□□□ 1.56
TRIM46-211ENST00000611379 TNIKQ9UKE5 1360 aa24.76■■□□□ 1.55
TRIM46-211ENST00000611379 TTBK1Q5TCY1 1321 aaPredicted RBP24.71■■□□□ 1.55
TRIM46-211ENST00000611379 SYNJ1O43426 1573 aa24.68■■□□□ 1.54
TRIM46-211ENST00000611379 GOLGA3Q08378 1498 aa24.65■■□□□ 1.54
TRIM46-211ENST00000611379 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.55■■□□□ 1.52
TRIM46-211ENST00000611379 CEP164Q9UPV0 1460 aa24.53■■□□□ 1.52
TRIM46-211ENST00000611379 NCAPD3P42695 1498 aa24.52■■□□□ 1.52
TRIM46-211ENST00000611379 CCER1Q8TC90 406 aaPredicted RBP24.5■■□□□ 1.51
TRIM46-211ENST00000611379 HMGXB3Q12766 1538 aa24.45■■□□□ 1.5
TRIM46-211ENST00000611379 KIF21BO75037 1637 aa24.42■■□□□ 1.5
TRIM46-211ENST00000611379 RANGAP1P46060 587 aaPredicted RBP24.41■■□□□ 1.5
TRIM46-211ENST00000611379 TOP2BQ02880 1626 aa24.4■■□□□ 1.5
TRIM46-211ENST00000611379 CLIP1P30622 1438 aa24.39■■□□□ 1.49
TRIM46-211ENST00000611379 RAPGEF2Q9Y4G8 1499 aa24.38■■□□□ 1.49
TRIM46-211ENST00000611379 BIVM-ERCC5R4GMW8 1640 aa24.27■■□□□ 1.48
TRIM46-211ENST00000611379 APLP2Q06481 763 aa24.26■■□□□ 1.47
TRIM46-211ENST00000611379 CFTRP13569 1480 aa24.26■■□□□ 1.47
TRIM46-211ENST00000611379 CUX1P39880 1505 aa24.23■■□□□ 1.47
TRIM46-211ENST00000611379 VPS8Q8N3P4 1428 aa24.23■■□□□ 1.47
TRIM46-211ENST00000611379 KIF27Q86VH2 1401 aa24.15■■□□□ 1.46
TRIM46-211ENST00000611379 PRXQ9BXM0 1461 aa24.15■■□□□ 1.46
TRIM46-211ENST00000611379 HNRNPUL2Q1KMD3 747 aaKnown RBP24.14■■□□□ 1.45
TRIM46-211ENST00000611379 ERICH3Q5RHP9 1530 aa24.09■■□□□ 1.45
TRIM46-211ENST00000611379 CADPSQ9ULU8 1353 aa24.08■■□□□ 1.45
TRIM46-211ENST00000611379 CC2D2AQ9P2K1 1620 aa23.97■■□□□ 1.43
TRIM46-211ENST00000611379 CUX2O14529 1486 aa23.96■■□□□ 1.43
TRIM46-211ENST00000611379 ARAP1Q96P48 1450 aa23.95■■□□□ 1.42
TRIM46-211ENST00000611379 IGF1RP08069 1367 aa23.9■■□□□ 1.42
TRIM46-211ENST00000611379 PRDM2Q13029 1718 aa23.89■■□□□ 1.41
TRIM46-211ENST00000611379 KANK4Q5T7N3 995 aaPredicted RBP23.88■■□□□ 1.41
TRIM46-211ENST00000611379 FGD5Q6ZNL6 1462 aa23.87■■□□□ 1.41
TRIM46-211ENST00000611379 DIEXFQ68CQ4 756 aaKnown RBP23.86■■□□□ 1.41
TRIM46-211ENST00000611379 FANCD2Q9BXW9 1451 aa23.82■■□□□ 1.4
TRIM46-211ENST00000611379 CARMIL1Q5VZK9 1371 aa23.81■■□□□ 1.4
TRIM46-211ENST00000611379 ARHGAP35Q9NRY4 1499 aa23.8■■□□□ 1.4
TRIM46-211ENST00000611379 ZNF316A6NFI3 1004 aaPredicted RBP23.74■■□□□ 1.39
TRIM46-211ENST00000611379 NESP48681 1621 aa23.71■■□□□ 1.39
TRIM46-211ENST00000611379 RAD54L2Q9Y4B4 1467 aa23.67■■□□□ 1.38
TRIM46-211ENST00000611379 P3H3Q8IVL6 736 aa23.63■■□□□ 1.37
TRIM46-211ENST00000611379 DNMBPQ6XZF7 1577 aa23.62■■□□□ 1.37
TRIM46-211ENST00000611379 TOPBP1Q92547 1522 aa23.62■■□□□ 1.37
TRIM46-211ENST00000611379 ITGAEP38570 1179 aa23.61■■□□□ 1.37
TRIM46-211ENST00000611379 RRBP1Q9P2E9 1410 aaKnown RBP23.61■■□□□ 1.37
TRIM46-211ENST00000611379 POLA1P09884 1462 aaPredicted RBP23.61■■□□□ 1.37
TRIM46-211ENST00000611379 CCNB3Q8WWL7 1395 aa23.58■■□□□ 1.37
TRIM46-211ENST00000611379 ATP1B4Q9UN42 357 aaPredicted RBP23.58■■□□□ 1.36
TRIM46-211ENST00000611379 SCAF1Q9H7N4 1312 aaKnown RBP23.57■■□□□ 1.36
TRIM46-211ENST00000611379 ABCA10Q8WWZ4 1543 aa23.56■■□□□ 1.36
TRIM46-211ENST00000611379 DHX57Q6P158 1386 aaKnown RBP23.54■■□□□ 1.36
TRIM46-211ENST00000611379 DNAJC5BQ9UF47 199 aa23.51■■□□□ 1.35
TRIM46-211ENST00000611379 CLSPNQ9HAW4 1339 aa23.5■■□□□ 1.35
TRIM46-211ENST00000611379 FHAD1B1AJZ9 1412 aa23.49■■□□□ 1.35
TRIM46-211ENST00000611379 ACIN1Q9UKV3 1341 aaKnown RBP23.48■■□□□ 1.35
TRIM46-211ENST00000611379 TIAM1Q13009 1591 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms