RNA–Protein interactions for RNA: ENST00000603928.2

LINC00094-205, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LINC00094, Length 5,722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00094-205ENST00000603928 DCAF8L2P0C7V8 631 aa28.51■■■□□ 2.16
LINC00094-205ENST00000603928 SUPT5HO00267 1087 aaKnown RBP27.56■■■□□ 2
LINC00094-205ENST00000603928 PELP1Q8IZL8 1130 aaKnown RBP27.01■■□□□ 1.91
LINC00094-205ENST00000603928 SHROOM4Q9ULL8 1493 aa26.81■■□□□ 1.88
LINC00094-205ENST00000603928 EHMT2Q96KQ7 1210 aa26.78■■□□□ 1.88
LINC00094-205ENST00000603928 NISCHQ9Y2I1 1504 aa26.61■■□□□ 1.85
LINC00094-205ENST00000603928 PCGF6Q9BYE7 350 aa26.29■■□□□ 1.8
LINC00094-205ENST00000603928 APLP2Q06481 763 aa26.26■■□□□ 1.79
LINC00094-205ENST00000603928 CENPBP07199 599 aaPredicted RBP26.07■■□□□ 1.76
LINC00094-205ENST00000603928 FAM9AQ8IZU1 332 aaPredicted RBP26.04■■□□□ 1.76
LINC00094-205ENST00000603928 TTBK1Q5TCY1 1321 aaPredicted RBP25.97■■□□□ 1.75
LINC00094-205ENST00000603928 ERICH6Q7L0X2 663 aa25.94■■□□□ 1.74
LINC00094-205ENST00000603928 ZEB1P37275 1124 aaPredicted RBP25.89■■□□□ 1.74
LINC00094-205ENST00000603928 CCER1Q8TC90 406 aaPredicted RBP25.77■■□□□ 1.72
LINC00094-205ENST00000603928 MYT1Q01538 1121 aa25.66■■□□□ 1.7
LINC00094-205ENST00000603928 TRIM41Q8WV44 630 aa25.44■■□□□ 1.66
LINC00094-205ENST00000603928 RANGAP1P46060 587 aaPredicted RBP25.44■■□□□ 1.66
LINC00094-205ENST00000603928 YTHDC1Q96MU7 727 aaKnown RBP25.43■■□□□ 1.66
LINC00094-205ENST00000603928 NEFLP07196 543 aa25.4■■□□□ 1.66
LINC00094-205ENST00000603928 ATP1B4Q9UN42 357 aaPredicted RBP25.16■■□□□ 1.62
LINC00094-205ENST00000603928 UBTFP17480 764 aaKnown RBP25.16■■□□□ 1.62
LINC00094-205ENST00000603928 HRCP23327 699 aa25.05■■□□□ 1.6
LINC00094-205ENST00000603928 TRIM26Q12899 539 aaPredicted RBP25.02■■□□□ 1.6
LINC00094-205ENST00000603928 PPARGC1BQ86YN6 1023 aaKnown RBP25.01■■□□□ 1.59
LINC00094-205ENST00000603928 DAXXQ9UER7 740 aaPredicted RBP24.67■■□□□ 1.54
LINC00094-205ENST00000603928 LOC105371045A0A1W2PR82 267 aa24.54■■□□□ 1.52
LINC00094-205ENST00000603928 ITGAEP38570 1179 aa24.5■■□□□ 1.51
LINC00094-205ENST00000603928 POLR3GLQ9BT43 218 aa24.45■■□□□ 1.5
LINC00094-205ENST00000603928 HNRNPUL2Q1KMD3 747 aaKnown RBP24.44■■□□□ 1.5
LINC00094-205ENST00000603928 CHIC1Q5VXU3 224 aa24.41■■□□□ 1.5
LINC00094-205ENST00000603928 DIEXFQ68CQ4 756 aaKnown RBP24.36■■□□□ 1.49
LINC00094-205ENST00000603928 RTL5Q5HYW3 569 aaPredicted RBP24.29■■□□□ 1.48
LINC00094-205ENST00000603928 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.28■■□□□ 1.48
LINC00094-205ENST00000603928 CNGB1Q14028 1251 aaPredicted RBP24.28■■□□□ 1.48
LINC00094-205ENST00000603928 ZNF316A6NFI3 1004 aaPredicted RBP24.11■■□□□ 1.45
LINC00094-205ENST00000603928 GTF3C3Q9Y5Q9 886 aa24.09■■□□□ 1.45
LINC00094-205ENST00000603928 CLSPNQ9HAW4 1339 aa24.03■■□□□ 1.44
LINC00094-205ENST00000603928 MYT1LQ9UL68 1186 aa24.02■■□□□ 1.44
LINC00094-205ENST00000603928 BCANQ96GW7 911 aa23.98■■□□□ 1.43
LINC00094-205ENST00000603928 SLC4A1APQ9BWU0 796 aaKnown RBP23.82■■□□□ 1.4
LINC00094-205ENST00000603928 CDK11AQ9UQ88 783 aaPredicted RBP23.8■■□□□ 1.4
LINC00094-205ENST00000603928 FAM50AQ14320 339 aaKnown RBP23.78■■□□□ 1.4
LINC00094-205ENST00000603928 NEUROD1Q13562 356 aa23.75■■□□□ 1.39
LINC00094-205ENST00000603928 ANP32CO43423 234 aa23.72■■□□□ 1.39
LINC00094-205ENST00000603928 ACIN1Q9UKV3 1341 aaKnown RBP23.7■■□□□ 1.39
LINC00094-205ENST00000603928 TRIM52Q96A61 297 aa23.67■■□□□ 1.38
LINC00094-205ENST00000603928 ZNF326Q5BKZ1 582 aaKnown RBP23.47■■□□□ 1.35
LINC00094-205ENST00000603928 ANP32AP39687 249 aaKnown RBP23.42■■□□□ 1.34
LINC00094-205ENST00000603928 ZBTB47Q9UFB7 747 aaPredicted RBP23.39■■□□□ 1.34
LINC00094-205ENST00000603928 CANXP27824 592 aaKnown RBP23.32■■□□□ 1.32
LINC00094-205ENST00000603928 NPM2Q86SE8 214 aaKnown RBP23.28■■□□□ 1.32
LINC00094-205ENST00000603928 FKBP8Q14318 412 aa23.25■■□□□ 1.31
LINC00094-205ENST00000603928 EIF5BO60841 1220 aaKnown RBP23.24■■□□□ 1.31
LINC00094-205ENST00000603928 BCL11AQ9H165 835 aa23.22■■□□□ 1.31
LINC00094-205ENST00000603928 HNRNPUQ00839 825 aaKnown RBP eCLIP23.04■■□□□ 1.28
LINC00094-205ENST00000603928 CSRNP3Q8WYN3 585 aa23.04■■□□□ 1.28
LINC00094-205ENST00000603928 NEFMP07197 916 aa23.03■■□□□ 1.28
LINC00094-205ENST00000603928 ANP32BQ92688 251 aaKnown RBP23.01■■□□□ 1.27
LINC00094-205ENST00000603928 SLC24A1O60721 1099 aa23■■□□□ 1.27
LINC00094-205ENST00000603928 PABPN1Q86U42 306 aaKnown RBP eCLIP22.99■■□□□ 1.27
LINC00094-205ENST00000603928 P3H3Q8IVL6 736 aa22.98■■□□□ 1.27
LINC00094-205ENST00000603928 SCAF1Q9H7N4 1312 aaKnown RBP22.97■■□□□ 1.27
LINC00094-205ENST00000603928 DDX10Q13206 875 aaKnown RBP22.96■■□□□ 1.27
LINC00094-205ENST00000603928 NBR1Q14596 966 aa22.93■■□□□ 1.26
LINC00094-205ENST00000603928 FAM9BQ8IZU0 186 aa22.92■■□□□ 1.26
LINC00094-205ENST00000603928 HSP90AA1P07900 732 aaKnown RBP22.92■■□□□ 1.26
LINC00094-205ENST00000603928 TONSLQ96HA7 1378 aa22.91■■□□□ 1.26
LINC00094-205ENST00000603928 GLIPR1L2Q4G1C9 344 aa22.9■■□□□ 1.26
LINC00094-205ENST00000603928 UPF2Q9HAU5 1272 aaKnown RBP22.89■■□□□ 1.26
LINC00094-205ENST00000603928 DCAF1Q9Y4B6 1507 aa22.88■■□□□ 1.25
LINC00094-205ENST00000603928 ARID3CA6NKF2 412 aa22.88■■□□□ 1.25
LINC00094-205ENST00000603928 CCDC136Q96JN2 1154 aa22.86■■□□□ 1.25
LINC00094-205ENST00000603928 FBLN2P98095 1184 aa22.83■■□□□ 1.24
LINC00094-205ENST00000603928 ZNF777Q9ULD5 760 aaPredicted RBP22.8■■□□□ 1.24
LINC00094-205ENST00000603928 SALL2Q9Y467 1007 aaPredicted RBP22.79■■□□□ 1.24
LINC00094-205ENST00000603928 MIER1Q8N108 512 aa22.76■■□□□ 1.23
LINC00094-205ENST00000603928 ABCC9O60706 1549 aa22.73■■□□□ 1.23
LINC00094-205ENST00000603928 ARXQ96QS3 562 aa22.71■■□□□ 1.23
LINC00094-205ENST00000603928 TMC1Q8TDI8 760 aa22.7■■□□□ 1.22
LINC00094-205ENST00000603928 IRX6P78412 446 aaPredicted RBP22.68■■□□□ 1.22
LINC00094-205ENST00000603928 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.66■■□□□ 1.22
LINC00094-205ENST00000603928 MRS2Q9HD23 443 aa22.66■■□□□ 1.22
LINC00094-205ENST00000603928 WDR43Q15061 677 aaKnown RBP eCLIP22.52■■□□□ 1.2
LINC00094-205ENST00000603928 ANP32EQ9BTT0 268 aa22.52■■□□□ 1.19
LINC00094-205ENST00000603928 CHGAP10645 457 aaKnown RBP22.51■■□□□ 1.19
LINC00094-205ENST00000603928 HIRIP3Q9BW71 556 aaPredicted RBP22.5■■□□□ 1.19
LINC00094-205ENST00000603928 CHIC2Q9UKJ5 165 aa22.5■■□□□ 1.19
LINC00094-205ENST00000603928 DDRGK1Q96HY6 314 aa22.44■■□□□ 1.18
LINC00094-205ENST00000603928 KDM2AQ9Y2K7 1162 aa22.38■■□□□ 1.17
LINC00094-205ENST00000603928 BECN1Q14457 450 aa22.38■■□□□ 1.17
LINC00094-205ENST00000603928 EIF4G2P78344 907 aaKnown RBP eCLIP22.37■■□□□ 1.17
LINC00094-205ENST00000603928 TRIM44Q96DX7 344 aaPredicted RBP22.36■■□□□ 1.17
LINC00094-205ENST00000603928 STAG3Q9UJ98 1225 aa22.35■■□□□ 1.17
LINC00094-205ENST00000603928 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.33■■□□□ 1.17
LINC00094-205ENST00000603928 MYH16Q9H6N6 1097 aa22.3■■□□□ 1.16
LINC00094-205ENST00000603928 SUPT16HQ9Y5B9 1047 aaKnown RBP22.29■■□□□ 1.16
LINC00094-205ENST00000603928 ESF1Q9H501 851 aaKnown RBP22.28■■□□□ 1.16
LINC00094-205ENST00000603928 PPM1GO15355 546 aaPredicted RBP22.24■■□□□ 1.15
LINC00094-205ENST00000603928 MTUS2Q5JR59 1369 aa22.24■■□□□ 1.15
LINC00094-205ENST00000603928 GOLGA6L22H0YM25 854 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms