RNA–Protein interactions for RNA: ENST00000596228.5

LRMDA-212, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 4

Gene LRMDA, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-212ENST00000596228 CHIC1Q5VXU3 224 aa15.1■□□□□ 0.01
LRMDA-212ENST00000596228 AEBP2Q6ZN18 517 aaPredicted RBP15.07■□□□□ 0
LRMDA-212ENST00000596228 PHF23Q9BUL5 403 aaPredicted RBP13.32□□□□□ -0.28
LRMDA-212ENST00000596228 SENP3Q9H4L4 574 aaPredicted RBP12.75□□□□□ -0.37
LRMDA-212ENST00000596228 PLPPR3Q6T4P5 718 aa12.44□□□□□ -0.42
LRMDA-212ENST00000596228 FOXD1Q16676 465 aa11.78□□□□□ -0.52
LRMDA-212ENST00000596228 ADRA2BP18089 450 aa11.65□□□□□ -0.54
LRMDA-212ENST00000596228 PPP6R1Q9UPN7 881 aa11.63□□□□□ -0.55
LRMDA-212ENST00000596228 PIAS4Q8N2W9 510 aaPredicted RBP11.2□□□□□ -0.62
LRMDA-212ENST00000596228 KCNA4P22459 653 aa11.17□□□□□ -0.62
LRMDA-212ENST00000596228 PPP4R3CPQ6ZMV5 832 aa11.01□□□□□ -0.65
LRMDA-212ENST00000596228 NCBP3Q53F19 620 aaKnown RBP10.85□□□□□ -0.67
LRMDA-212ENST00000596228 EHMT2Q96KQ7 1210 aa10.83□□□□□ -0.68
LRMDA-212ENST00000596228 MSH5O43196 834 aa10.72□□□□□ -0.69
LRMDA-212ENST00000596228 SLC4A1APQ9BWU0 796 aaKnown RBP10.72□□□□□ -0.69
LRMDA-212ENST00000596228 SCAF1Q9H7N4 1312 aaKnown RBP10.69□□□□□ -0.7
LRMDA-212ENST00000596228 NPM3O75607 178 aaKnown RBP10.66□□□□□ -0.7
LRMDA-212ENST00000596228 CNKSR2Q8WXI2 1034 aa10.63□□□□□ -0.71
LRMDA-212ENST00000596228 CSRNP3Q8WYN3 585 aa10.54□□□□□ -0.72
LRMDA-212ENST00000596228 MAPK8IP2Q13387 824 aaPredicted RBP10.46□□□□□ -0.73
LRMDA-212ENST00000596228 RNF216Q9NWF9 866 aaPredicted RBP10.31□□□□□ -0.76
LRMDA-212ENST00000596228 DNAJC5BQ9UF47 199 aa10.29□□□□□ -0.76
LRMDA-212ENST00000596228 ZBTB22O15209 634 aa10.26□□□□□ -0.77
LRMDA-212ENST00000596228 DMRT2Q9Y5R5 561 aa10.23□□□□□ -0.77
LRMDA-212ENST00000596228 HOXD11P31277 338 aaPredicted RBP10.17□□□□□ -0.78
LRMDA-212ENST00000596228 FOXD4L1Q9NU39 408 aa10.17□□□□□ -0.78
LRMDA-212ENST00000596228 SLC4A2P04920 1241 aa9.97□□□□□ -0.81
LRMDA-212ENST00000596228 MYCNP04198 464 aaPredicted RBP9.85□□□□□ -0.83
LRMDA-212ENST00000596228 ATXN8OSP0DMR3 200 aa9.81□□□□□ -0.84
LRMDA-212ENST00000596228 DCAF8L1A6NGE4 600 aa9.79□□□□□ -0.84
LRMDA-212ENST00000596228 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.71□□□□□ -0.86
LRMDA-212ENST00000596228 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.6□□□□□ -0.87
LRMDA-212ENST00000596228 HNRNPUL2Q1KMD3 747 aaKnown RBP9.6□□□□□ -0.87
LRMDA-212ENST00000596228 SAMD1Q6SPF0 538 aaPredicted RBP9.58□□□□□ -0.88
LRMDA-212ENST00000596228 U3KPZ7 1027 aaPredicted RBP9.57□□□□□ -0.88
LRMDA-212ENST00000596228 ATF5Q9Y2D1 282 aaPredicted RBP9.55□□□□□ -0.88
LRMDA-212ENST00000596228 FKBP8Q14318 412 aa9.51□□□□□ -0.89
LRMDA-212ENST00000596228 APLP2Q06481 763 aa9.42□□□□□ -0.9
LRMDA-212ENST00000596228 ZNF219Q9P2Y4 722 aaPredicted RBP9.38□□□□□ -0.91
LRMDA-212ENST00000596228 AMER1Q5JTC6 1135 aaPredicted RBP9.33□□□□□ -0.92
LRMDA-212ENST00000596228 RTN4Q9NQC3 1192 aaKnown RBP9.3□□□□□ -0.92
LRMDA-212ENST00000596228 TRHP20396 242 aaPredicted RBP9.21□□□□□ -0.94
LRMDA-212ENST00000596228 RNF39Q9H2S5 420 aa9.21□□□□□ -0.94
LRMDA-212ENST00000596228 SPINK5Q9NQ38 1064 aaPredicted RBP9.19□□□□□ -0.94
LRMDA-212ENST00000596228 CAPN15O75808 1086 aa9.16□□□□□ -0.94
LRMDA-212ENST00000596228 FBLN2P98095 1184 aa9.15□□□□□ -0.94
LRMDA-212ENST00000596228 MKRN4PQ13434 485 aaPredicted RBP9.15□□□□□ -0.94
LRMDA-212ENST00000596228 POLA2Q14181 598 aa9.15□□□□□ -0.94
LRMDA-212ENST00000596228 SPDYE4A6NLX3 237 aa9.14□□□□□ -0.95
LRMDA-212ENST00000596228 C1QBPQ07021 282 aaKnown RBP9.14□□□□□ -0.95
LRMDA-212ENST00000596228 POTEDQ86YR6 584 aa9.1□□□□□ -0.95
LRMDA-212ENST00000596228 FBXO3Q9UK99 471 aa9.09□□□□□ -0.95
LRMDA-212ENST00000596228 SLC24A1O60721 1099 aa9.02□□□□□ -0.97
LRMDA-212ENST00000596228 PROM2Q8N271 834 aa9.02□□□□□ -0.97
LRMDA-212ENST00000596228 ABCB7O75027 752 aa9.01□□□□□ -0.97
LRMDA-212ENST00000596228 ZBTB12Q9Y330 459 aaPredicted RBP9.01□□□□□ -0.97
LRMDA-212ENST00000596228 VASPP50552 380 aaPredicted RBP8.93□□□□□ -0.98
LRMDA-212ENST00000596228 DSG3P32926 999 aa8.91□□□□□ -0.98
LRMDA-212ENST00000596228 ZNF692Q9BU19 519 aaPredicted RBP8.85□□□□□ -0.99
LRMDA-212ENST00000596228 IFNLR1Q8IU57 520 aaPredicted RBP8.84□□□□□ -0.99
LRMDA-212ENST00000596228 SPDYE2BA6NHP3 402 aa8.8□□□□□ -1
LRMDA-212ENST00000596228 SPDYE6P0CI01 402 aa8.8□□□□□ -1
LRMDA-212ENST00000596228 SPDYE2Q495Y8 402 aa8.8□□□□□ -1
LRMDA-212ENST00000596228 OSCARQ8IYS5 282 aa8.79□□□□□ -1
LRMDA-212ENST00000596228 STAG3Q9UJ98 1225 aa8.76□□□□□ -1.01
LRMDA-212ENST00000596228 SSUH2Q9Y2M2 353 aa8.75□□□□□ -1.01
LRMDA-212ENST00000596228 KLHL34Q8N239 644 aa8.73□□□□□ -1.01
LRMDA-212ENST00000596228 CACNB1Q02641 598 aaPredicted RBP8.72□□□□□ -1.01
LRMDA-212ENST00000596228 PABPN1Q86U42 306 aaKnown RBP eCLIP8.72□□□□□ -1.01
LRMDA-212ENST00000596228 SPOCK2Q92563 424 aa8.69□□□□□ -1.02
LRMDA-212ENST00000596228 PKD2Q13563 968 aa8.68□□□□□ -1.02
LRMDA-212ENST00000596228 PLCD3Q8N3E9 789 aa8.68□□□□□ -1.02
LRMDA-212ENST00000596228 DCAF8L2P0C7V8 631 aa8.66□□□□□ -1.02
LRMDA-212ENST00000596228 MIER1Q8N108 512 aa8.66□□□□□ -1.02
LRMDA-212ENST00000596228 PLCB2Q00722 1185 aa8.61□□□□□ -1.03
LRMDA-212ENST00000596228 PLEKHG5O94827 1062 aa8.59□□□□□ -1.03
LRMDA-212ENST00000596228 ECM2O94769 699 aaPredicted RBP8.58□□□□□ -1.04
LRMDA-212ENST00000596228 ZBTB47Q9UFB7 747 aaPredicted RBP8.56□□□□□ -1.04
LRMDA-212ENST00000596228 HAP1P54257 671 aaPredicted RBP8.5□□□□□ -1.05
LRMDA-212ENST00000596228 CIZ1Q9ULV3 898 aaPredicted RBP8.5□□□□□ -1.05
LRMDA-212ENST00000596228 RBM42Q9BTD8 480 aaKnown RBP8.48□□□□□ -1.05
LRMDA-212ENST00000596228 RGL2O15211 777 aa8.47□□□□□ -1.05
LRMDA-212ENST00000596228 BBXQ8WY36 941 aaPredicted RBP8.47□□□□□ -1.05
LRMDA-212ENST00000596228 AKT1S1Q96B36 256 aa8.47□□□□□ -1.05
LRMDA-212ENST00000596228 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.47□□□□□ -1.05
LRMDA-212ENST00000596228 SPDYE1Q8NFV5 336 aaPredicted RBP8.46□□□□□ -1.06
LRMDA-212ENST00000596228 NPM1P06748 294 aaKnown RBP eCLIP8.44□□□□□ -1.06
LRMDA-212ENST00000596228 TRIM41Q8WV44 630 aa8.42□□□□□ -1.06
LRMDA-212ENST00000596228 CLEC11AQ9Y240 323 aa8.41□□□□□ -1.06
LRMDA-212ENST00000596228 PRR29P0C7W0 189 aa8.4□□□□□ -1.06
LRMDA-212ENST00000596228 GSE1Q14687 1217 aa8.4□□□□□ -1.06
LRMDA-212ENST00000596228 PAXIP1Q6ZW49 1069 aaPredicted RBP8.39□□□□□ -1.07
LRMDA-212ENST00000596228 VSIG10Q8N0Z9 540 aa8.39□□□□□ -1.07
LRMDA-212ENST00000596228 REM2Q8IYK8 340 aaPredicted RBP8.38□□□□□ -1.07
LRMDA-212ENST00000596228 CFAP44Q96MT7 982 aa8.37□□□□□ -1.07
LRMDA-212ENST00000596228 CHGAP10645 457 aaKnown RBP8.36□□□□□ -1.07
LRMDA-212ENST00000596228 NUBP1P53384 320 aa8.36□□□□□ -1.07
LRMDA-212ENST00000596228 DCAF8Q5TAQ9 597 aa8.36□□□□□ -1.07
LRMDA-212ENST00000596228 SPRYD3Q8NCJ5 442 aa8.35□□□□□ -1.07
LRMDA-212ENST00000596228 CREBZFQ9NS37 354 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms