RNA–Protein interactions for RNA: ENST00000570166.1

PKM-225, Transcript of pyruvate kinase M1/2, humanhuman

TSL 2

Gene PKM, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-225ENST00000570166 NISCHQ9Y2I1 1504 aa15.1■□□□□ 0.01
PKM-225ENST00000570166 CCDC180Q9P1Z9 1646 aa13.13□□□□□ -0.31
PKM-225ENST00000570166 ZCCHC6Q5VYS8 1495 aaKnown RBP12.82□□□□□ -0.36
PKM-225ENST00000570166 DCAF1Q9Y4B6 1507 aa12.57□□□□□ -0.4
PKM-225ENST00000570166 SHROOM4Q9ULL8 1493 aa12.51□□□□□ -0.41
PKM-225ENST00000570166 SUPT5HO00267 1087 aaKnown RBP12.24□□□□□ -0.45
PKM-225ENST00000570166 MYO15BQ96JP2 1530 aa12.22□□□□□ -0.45
PKM-225ENST00000570166 ABCC9O60706 1549 aa12.18□□□□□ -0.46
PKM-225ENST00000570166 DCAF8L2P0C7V8 631 aa12.06□□□□□ -0.48
PKM-225ENST00000570166 SCRIBQ14160 1630 aa12.01□□□□□ -0.49
PKM-225ENST00000570166 CHIC1Q5VXU3 224 aa12□□□□□ -0.49
PKM-225ENST00000570166 NACADO15069 1562 aa12□□□□□ -0.49
PKM-225ENST00000570166 RB1CC1Q8TDY2 1594 aa11.88□□□□□ -0.51
PKM-225ENST00000570166 RSF1Q96T23 1441 aaPredicted RBP11.83□□□□□ -0.52
PKM-225ENST00000570166 BAZ1AQ9NRL2 1556 aaPredicted RBP11.74□□□□□ -0.53
PKM-225ENST00000570166 HRCP23327 699 aa11.68□□□□□ -0.54
PKM-225ENST00000570166 UNC13AQ9UPW8 1703 aa11.68□□□□□ -0.54
PKM-225ENST00000570166 WIZO95785 1651 aa11.65□□□□□ -0.54
PKM-225ENST00000570166 MROH2BQ7Z745 1585 aa11.65□□□□□ -0.54
PKM-225ENST00000570166 EIF4G1Q04637 1599 aaKnown RBP11.64□□□□□ -0.55
PKM-225ENST00000570166 CECR2Q9BXF3 1484 aa11.6□□□□□ -0.55
PKM-225ENST00000570166 SMARCA4P51532 1647 aa11.57□□□□□ -0.56
PKM-225ENST00000570166 TOP2AP11388 1531 aaKnown RBP11.57□□□□□ -0.56
PKM-225ENST00000570166 PCGF6Q9BYE7 350 aa11.54□□□□□ -0.56
PKM-225ENST00000570166 TRIM41Q8WV44 630 aa11.51□□□□□ -0.57
PKM-225ENST00000570166 LOC105371045A0A1W2PR82 267 aa11.48□□□□□ -0.57
PKM-225ENST00000570166 TRIM26Q12899 539 aaPredicted RBP11.48□□□□□ -0.57
PKM-225ENST00000570166 SMARCA2P51531 1590 aa11.46□□□□□ -0.57
PKM-225ENST00000570166 PEG3Q9GZU2 1588 aa11.41□□□□□ -0.58
PKM-225ENST00000570166 BICRAQ9NZM4 1560 aa11.37□□□□□ -0.59
PKM-225ENST00000570166 ZEB1P37275 1124 aaPredicted RBP11.36□□□□□ -0.59
PKM-225ENST00000570166 CCDC88BA6NC98 1476 aa11.35□□□□□ -0.59
PKM-225ENST00000570166 EEA1Q15075 1411 aa11.34□□□□□ -0.59
PKM-225ENST00000570166 ABCC8Q09428 1581 aa11.31□□□□□ -0.6
PKM-225ENST00000570166 FAM9AQ8IZU1 332 aaPredicted RBP11.26□□□□□ -0.61
PKM-225ENST00000570166 WRNQ14191 1432 aaPredicted RBP eCLIP11.26□□□□□ -0.611e-7■■■■□ 20.9
PKM-225ENST00000570166 KIF21BO75037 1637 aa11.23□□□□□ -0.61
PKM-225ENST00000570166 PPARGC1BQ86YN6 1023 aaKnown RBP11.22□□□□□ -0.61
PKM-225ENST00000570166 GOLGA3Q08378 1498 aa11.19□□□□□ -0.62
PKM-225ENST00000570166 CEP162Q5TB80 1403 aa11.18□□□□□ -0.62
PKM-225ENST00000570166 TNIKQ9UKE5 1360 aa11.17□□□□□ -0.62
PKM-225ENST00000570166 BAZ1BQ9UIG0 1483 aaKnown RBP11.16□□□□□ -0.62
PKM-225ENST00000570166 BIVM-ERCC5R4GMW8 1640 aa11.16□□□□□ -0.62
PKM-225ENST00000570166 SYNJ1O43426 1573 aa11.16□□□□□ -0.62
PKM-225ENST00000570166 PRDM2Q13029 1718 aa11.15□□□□□ -0.62
PKM-225ENST00000570166 ATAD2BQ9ULI0 1458 aa11.15□□□□□ -0.62
PKM-225ENST00000570166 CEP164Q9UPV0 1460 aa11.13□□□□□ -0.63
PKM-225ENST00000570166 HMGXB3Q12766 1538 aa11.12□□□□□ -0.63
PKM-225ENST00000570166 TOP2BQ02880 1626 aa11.11□□□□□ -0.63
PKM-225ENST00000570166 SOGA1O94964 1423 aa11.1□□□□□ -0.63
PKM-225ENST00000570166 CSRNP3Q8WYN3 585 aa11.04□□□□□ -0.64
PKM-225ENST00000570166 ERICH3Q5RHP9 1530 aa11.04□□□□□ -0.64
PKM-225ENST00000570166 RUSC2Q8N2Y8 1516 aa11.04□□□□□ -0.64
PKM-225ENST00000570166 EHMT2Q96KQ7 1210 aa11.03□□□□□ -0.64
PKM-225ENST00000570166 PABPN1Q86U42 306 aaKnown RBP eCLIP11.01□□□□□ -0.65
PKM-225ENST00000570166 VPS8Q8N3P4 1428 aa10.97□□□□□ -0.65
PKM-225ENST00000570166 NCAPD3P42695 1498 aa10.97□□□□□ -0.65
PKM-225ENST00000570166 CLIP1P30622 1438 aa10.96□□□□□ -0.65
PKM-225ENST00000570166 UBTFP17480 764 aaKnown RBP10.94□□□□□ -0.66
PKM-225ENST00000570166 CCER1Q8TC90 406 aaPredicted RBP10.93□□□□□ -0.66
PKM-225ENST00000570166 RAPGEF2Q9Y4G8 1499 aa10.91□□□□□ -0.66
PKM-225ENST00000570166 CUX1P39880 1505 aa10.89□□□□□ -0.67
PKM-225ENST00000570166 PRXQ9BXM0 1461 aa10.88□□□□□ -0.67
PKM-225ENST00000570166 CFTRP13569 1480 aa10.87□□□□□ -0.67
PKM-225ENST00000570166 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.86□□□□□ -0.67
PKM-225ENST00000570166 KIF27Q86VH2 1401 aa10.84□□□□□ -0.67
PKM-225ENST00000570166 ARAP1Q96P48 1450 aa10.82□□□□□ -0.68
PKM-225ENST00000570166 APLP2Q06481 763 aa10.79□□□□□ -0.68
PKM-225ENST00000570166 CFAP43Q8NDM7 1665 aa10.77□□□□□ -0.69
PKM-225ENST00000570166 MAP3K1Q13233 1512 aa10.75□□□□□ -0.69
PKM-225ENST00000570166 CC2D2AQ9P2K1 1620 aa10.74□□□□□ -0.69
PKM-225ENST00000570166 CTTNBP2Q8WZ74 1663 aa10.74□□□□□ -0.69
PKM-225ENST00000570166 PELP1Q8IZL8 1130 aaKnown RBP10.74□□□□□ -0.69
PKM-225ENST00000570166 TTBK1Q5TCY1 1321 aaPredicted RBP10.74□□□□□ -0.69
PKM-225ENST00000570166 CUL7Q14999 1698 aa10.73□□□□□ -0.69
PKM-225ENST00000570166 DIEXFQ68CQ4 756 aaKnown RBP10.73□□□□□ -0.69
PKM-225ENST00000570166 CLSPNQ9HAW4 1339 aa10.73□□□□□ -0.69
PKM-225ENST00000570166 RRBP1Q9P2E9 1410 aaKnown RBP10.72□□□□□ -0.69
PKM-225ENST00000570166 CUX2O14529 1486 aa10.72□□□□□ -0.69
PKM-225ENST00000570166 DNMBPQ6XZF7 1577 aa10.72□□□□□ -0.69
PKM-225ENST00000570166 CENPBP07199 599 aaPredicted RBP10.71□□□□□ -0.69
PKM-225ENST00000570166 TIAM1Q13009 1591 aa10.71□□□□□ -0.69
PKM-225ENST00000570166 WDR97A6NE52 1622 aa10.7□□□□□ -0.7
PKM-225ENST00000570166 ARHGAP35Q9NRY4 1499 aa10.7□□□□□ -0.7
PKM-225ENST00000570166 FGD5Q6ZNL6 1462 aa10.69□□□□□ -0.7
PKM-225ENST00000570166 ZNF316A6NFI3 1004 aaPredicted RBP10.69□□□□□ -0.7
PKM-225ENST00000570166 EFCAB5A4FU69 1503 aa10.68□□□□□ -0.7
PKM-225ENST00000570166 CADPSQ9ULU8 1353 aa10.68□□□□□ -0.7
PKM-225ENST00000570166 KIF21AQ7Z4S6 1674 aa10.67□□□□□ -0.7
PKM-225ENST00000570166 SCAF1Q9H7N4 1312 aaKnown RBP10.67□□□□□ -0.7
PKM-225ENST00000570166 ACIN1Q9UKV3 1341 aaKnown RBP10.66□□□□□ -0.7
PKM-225ENST00000570166 HNRNPUL2Q1KMD3 747 aaKnown RBP10.64□□□□□ -0.71
PKM-225ENST00000570166 PCF11O94913 1555 aaKnown RBP10.64□□□□□ -0.71
PKM-225ENST00000570166 FHAD1B1AJZ9 1412 aa10.63□□□□□ -0.71
PKM-225ENST00000570166 LAMC3Q9Y6N6 1575 aa10.63□□□□□ -0.71
PKM-225ENST00000570166 ABCA10Q8WWZ4 1543 aa10.63□□□□□ -0.71
PKM-225ENST00000570166 FANCD2Q9BXW9 1451 aa10.62□□□□□ -0.71
PKM-225ENST00000570166 DHX57Q6P158 1386 aaKnown RBP10.61□□□□□ -0.71
PKM-225ENST00000570166 CCNB3Q8WWL7 1395 aa10.6□□□□□ -0.71
PKM-225ENST00000570166 FYCO1Q9BQS8 1478 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms