RNA–Protein interactions for RNA: ENST00000569074.1

CASC17-201, Transcript of cancer susceptibility 17, humanhuman

TSL 1 (best) BASIC

Gene CASC17, Length 2,059 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC17-201ENST00000569074 AEBP2Q6ZN18 517 aaPredicted RBP17.7■□□□□ 0.42
CASC17-201ENST00000569074 CHIC1Q5VXU3 224 aa16.71■□□□□ 0.27
CASC17-201ENST00000569074 SENP3Q9H4L4 574 aaPredicted RBP15.31■□□□□ 0.04
CASC17-201ENST00000569074 PHF23Q9BUL5 403 aaPredicted RBP14.99□□□□□ -0.01
CASC17-201ENST00000569074 FOXD1Q16676 465 aa14.2□□□□□ -0.14
CASC17-201ENST00000569074 POTEDQ86YR6 584 aa13.61□□□□□ -0.23
CASC17-201ENST00000569074 MSH5O43196 834 aa13.54□□□□□ -0.24
CASC17-201ENST00000569074 PIAS4Q8N2W9 510 aaPredicted RBP13.2□□□□□ -0.3
CASC17-201ENST00000569074 PLPPR3Q6T4P5 718 aa13.19□□□□□ -0.3
CASC17-201ENST00000569074 PPP6R1Q9UPN7 881 aa12.97□□□□□ -0.33
CASC17-201ENST00000569074 ADRA2BP18089 450 aa12.93□□□□□ -0.34
CASC17-201ENST00000569074 DMRT2Q9Y5R5 561 aa12.07□□□□□ -0.48
CASC17-201ENST00000569074 SCAF1Q9H7N4 1312 aaKnown RBP12.04□□□□□ -0.48
CASC17-201ENST00000569074 MAPK8IP2Q13387 824 aaPredicted RBP11.94□□□□□ -0.5
CASC17-201ENST00000569074 KCNA4P22459 653 aa11.77□□□□□ -0.52
CASC17-201ENST00000569074 CACNB1Q02641 598 aaPredicted RBP11.72□□□□□ -0.53
CASC17-201ENST00000569074 EHMT2Q96KQ7 1210 aa11.63□□□□□ -0.55
CASC17-201ENST00000569074 HOXD11P31277 338 aaPredicted RBP11.53□□□□□ -0.56
CASC17-201ENST00000569074 DCAF8L1A6NGE4 600 aa11.48□□□□□ -0.57
CASC17-201ENST00000569074 PPP4R3CPQ6ZMV5 832 aa11.47□□□□□ -0.57
CASC17-201ENST00000569074 RNF39Q9H2S5 420 aa11.45□□□□□ -0.58
CASC17-201ENST00000569074 CNKSR2Q8WXI2 1034 aa11.39□□□□□ -0.59
CASC17-201ENST00000569074 RNF216Q9NWF9 866 aaPredicted RBP11.37□□□□□ -0.59
CASC17-201ENST00000569074 C1QBPQ07021 282 aaKnown RBP11.34□□□□□ -0.59
CASC17-201ENST00000569074 DNAJC5BQ9UF47 199 aa11.32□□□□□ -0.6
CASC17-201ENST00000569074 SLC4A1APQ9BWU0 796 aaKnown RBP11.29□□□□□ -0.6
CASC17-201ENST00000569074 NCBP3Q53F19 620 aaKnown RBP11.23□□□□□ -0.61
CASC17-201ENST00000569074 CSRNP3Q8WYN3 585 aa11.2□□□□□ -0.62
CASC17-201ENST00000569074 NPM3O75607 178 aaKnown RBP11.1□□□□□ -0.63
CASC17-201ENST00000569074 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.94□□□□□ -0.66
CASC17-201ENST00000569074 ZBTB22O15209 634 aa10.85□□□□□ -0.67
CASC17-201ENST00000569074 FOXD4L1Q9NU39 408 aa10.65□□□□□ -0.7
CASC17-201ENST00000569074 U3KPZ7 1027 aaPredicted RBP10.64□□□□□ -0.71
CASC17-201ENST00000569074 POTEHQ6S545 545 aa10.62□□□□□ -0.71
CASC17-201ENST00000569074 DSG3P32926 999 aa10.6□□□□□ -0.71
CASC17-201ENST00000569074 CAPN15O75808 1086 aa10.57□□□□□ -0.72
CASC17-201ENST00000569074 APLP2Q06481 763 aa10.52□□□□□ -0.73
CASC17-201ENST00000569074 SPINK5Q9NQ38 1064 aaPredicted RBP10.51□□□□□ -0.73
CASC17-201ENST00000569074 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.39□□□□□ -0.75
CASC17-201ENST00000569074 HNRNPUL2Q1KMD3 747 aaKnown RBP10.39□□□□□ -0.75
CASC17-201ENST00000569074 ZNF219Q9P2Y4 722 aaPredicted RBP10.39□□□□□ -0.75
CASC17-201ENST00000569074 SLC4A2P04920 1241 aa10.35□□□□□ -0.75
CASC17-201ENST00000569074 TRHP20396 242 aaPredicted RBP10.3□□□□□ -0.76
CASC17-201ENST00000569074 SAMD1Q6SPF0 538 aaPredicted RBP10.27□□□□□ -0.76
CASC17-201ENST00000569074 RBM42Q9BTD8 480 aaKnown RBP10.24□□□□□ -0.77
CASC17-201ENST00000569074 ABCB7O75027 752 aa10.24□□□□□ -0.77
CASC17-201ENST00000569074 MYCNP04198 464 aaPredicted RBP10.23□□□□□ -0.77
CASC17-201ENST00000569074 ATXN8OSP0DMR3 200 aa10.19□□□□□ -0.78
CASC17-201ENST00000569074 RTN4Q9NQC3 1192 aaKnown RBP10.16□□□□□ -0.78
CASC17-201ENST00000569074 FKBP8Q14318 412 aa10.11□□□□□ -0.79
CASC17-201ENST00000569074 AMER1Q5JTC6 1135 aaPredicted RBP10.11□□□□□ -0.79
CASC17-201ENST00000569074 CHRDL2Q6WN34 429 aa10.03□□□□□ -0.8
CASC17-201ENST00000569074 SLC24A1O60721 1099 aa10.02□□□□□ -0.81
CASC17-201ENST00000569074 POLA2Q14181 598 aa9.98□□□□□ -0.81
CASC17-201ENST00000569074 ATF5Q9Y2D1 282 aaPredicted RBP9.95□□□□□ -0.82
CASC17-201ENST00000569074 ZBTB12Q9Y330 459 aaPredicted RBP9.92□□□□□ -0.82
CASC17-201ENST00000569074 AKT1S1Q96B36 256 aa9.91□□□□□ -0.82
CASC17-201ENST00000569074 SP7Q8TDD2 431 aaPredicted RBP9.84□□□□□ -0.83
CASC17-201ENST00000569074 REM2Q8IYK8 340 aaPredicted RBP9.75□□□□□ -0.85
CASC17-201ENST00000569074 PIP4P2Q8N4L2 257 aa9.71□□□□□ -0.86
CASC17-201ENST00000569074 FXR2P51116 673 aaKnown RBP eCLIP9.65□□□□□ -0.86
CASC17-201ENST00000569074 OSCARQ8IYS5 282 aa9.63□□□□□ -0.87
CASC17-201ENST00000569074 HAX1O00165 279 aa9.62□□□□□ -0.87
CASC17-201ENST00000569074 PITPNM1O00562 1244 aa9.62□□□□□ -0.87
CASC17-201ENST00000569074 SPDYE4A6NLX3 237 aa9.58□□□□□ -0.88
CASC17-201ENST00000569074 FBXO3Q9UK99 471 aa9.56□□□□□ -0.88
CASC17-201ENST00000569074 MKRN4PQ13434 485 aaPredicted RBP9.53□□□□□ -0.88
CASC17-201ENST00000569074 SPDYE2BA6NHP3 402 aa9.52□□□□□ -0.88
CASC17-201ENST00000569074 SPDYE6P0CI01 402 aa9.52□□□□□ -0.88
CASC17-201ENST00000569074 SPDYE2Q495Y8 402 aa9.52□□□□□ -0.88
CASC17-201ENST00000569074 FBLN2P98095 1184 aa9.49□□□□□ -0.89
CASC17-201ENST00000569074 VASPP50552 380 aaPredicted RBP9.44□□□□□ -0.9
CASC17-201ENST00000569074 PROM2Q8N271 834 aa9.44□□□□□ -0.9
CASC17-201ENST00000569074 SPDYE1Q8NFV5 336 aaPredicted RBP9.43□□□□□ -0.9
CASC17-201ENST00000569074 PRKAR2AP13861 404 aaKnown RBP9.38□□□□□ -0.91
CASC17-201ENST00000569074 EVX2Q03828 476 aa9.38□□□□□ -0.91
CASC17-201ENST00000569074 IFNLR1Q8IU57 520 aaPredicted RBP9.36□□□□□ -0.91
CASC17-201ENST00000569074 C19orf67A6NJJ6 358 aa9.36□□□□□ -0.91
CASC17-201ENST00000569074 DCAF8L2P0C7V8 631 aa9.34□□□□□ -0.91
CASC17-201ENST00000569074 PLCB2Q00722 1185 aa9.33□□□□□ -0.92
CASC17-201ENST00000569074 SSUH2Q9Y2M2 353 aa9.33□□□□□ -0.92
CASC17-201ENST00000569074 CLEC11AQ9Y240 323 aa9.32□□□□□ -0.92
CASC17-201ENST00000569074 ZNF692Q9BU19 519 aaPredicted RBP9.3□□□□□ -0.92
CASC17-201ENST00000569074 GABBR2O75899 941 aa9.25□□□□□ -0.93
CASC17-201ENST00000569074 PKD2Q13563 968 aa9.25□□□□□ -0.93
CASC17-201ENST00000569074 HAP1P54257 671 aaPredicted RBP9.23□□□□□ -0.93
CASC17-201ENST00000569074 CLCN6P51797 869 aa9.22□□□□□ -0.93
CASC17-201ENST00000569074 LHX8Q68G74 356 aa9.22□□□□□ -0.93
CASC17-201ENST00000569074 PRR29P0C7W0 189 aa9.19□□□□□ -0.94
CASC17-201ENST00000569074 KLHL34Q8N239 644 aa9.19□□□□□ -0.94
CASC17-201ENST00000569074 SPOCK2Q92563 424 aa9.14□□□□□ -0.95
CASC17-201ENST00000569074 CHADLQ6NUI6 762 aa9.12□□□□□ -0.95
CASC17-201ENST00000569074 PABPN1Q86U42 306 aaKnown RBP eCLIP9.12□□□□□ -0.95
CASC17-201ENST00000569074 ECM2O94769 699 aaPredicted RBP9.1□□□□□ -0.95
CASC17-201ENST00000569074 PLCD3Q8N3E9 789 aa9.09□□□□□ -0.95
CASC17-201ENST00000569074 STAG3Q9UJ98 1225 aa9.09□□□□□ -0.95
CASC17-201ENST00000569074 CD44P16070 742 aaKnown RBP9.07□□□□□ -0.96
CASC17-201ENST00000569074 FARP1Q9Y4F1 1045 aaPredicted RBP9.06□□□□□ -0.96
CASC17-201ENST00000569074 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.06□□□□□ -0.96
CASC17-201ENST00000569074 VSIG10Q8N0Z9 540 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms