RNA–Protein interactions for RNA: ENST00000568651.1

HERPUD1-214, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-214ENST00000568651 CHIC1Q5VXU3 224 aa25.29■■□□□ 1.64
HERPUD1-214ENST00000568651 AEBP2Q6ZN18 517 aaPredicted RBP25.06■■□□□ 1.6
HERPUD1-214ENST00000568651 PHF23Q9BUL5 403 aaPredicted RBP22.24■■□□□ 1.15
HERPUD1-214ENST00000568651 SENP3Q9H4L4 574 aaPredicted RBP21.26■□□□□ 0.99
HERPUD1-214ENST00000568651 PLPPR3Q6T4P5 718 aa20.89■□□□□ 0.93
HERPUD1-214ENST00000568651 FOXD1Q16676 465 aa19.55■□□□□ 0.72
HERPUD1-214ENST00000568651 ADRA2BP18089 450 aa19.38■□□□□ 0.69
HERPUD1-214ENST00000568651 PPP6R1Q9UPN7 881 aa19.34■□□□□ 0.69
HERPUD1-214ENST00000568651 KCNA4P22459 653 aa18.8■□□□□ 0.6
HERPUD1-214ENST00000568651 PIAS4Q8N2W9 510 aaPredicted RBP18.62■□□□□ 0.57
HERPUD1-214ENST00000568651 PPP4R3CPQ6ZMV5 832 aa18.44■□□□□ 0.54
HERPUD1-214ENST00000568651 EHMT2Q96KQ7 1210 aa18.3■□□□□ 0.52
HERPUD1-214ENST00000568651 NCBP3Q53F19 620 aaKnown RBP18.25■□□□□ 0.51
HERPUD1-214ENST00000568651 SLC4A1APQ9BWU0 796 aaKnown RBP18.07■□□□□ 0.48
HERPUD1-214ENST00000568651 NPM3O75607 178 aaKnown RBP17.9■□□□□ 0.46
HERPUD1-214ENST00000568651 SCAF1Q9H7N4 1312 aaKnown RBP17.87■□□□□ 0.45
HERPUD1-214ENST00000568651 MSH5O43196 834 aa17.85■□□□□ 0.45
HERPUD1-214ENST00000568651 CSRNP3Q8WYN3 585 aa17.83■□□□□ 0.44
HERPUD1-214ENST00000568651 CNKSR2Q8WXI2 1034 aa17.81■□□□□ 0.44
HERPUD1-214ENST00000568651 DNAJC5BQ9UF47 199 aa17.51■□□□□ 0.39
HERPUD1-214ENST00000568651 ZBTB22O15209 634 aa17.31■□□□□ 0.36
HERPUD1-214ENST00000568651 RNF216Q9NWF9 866 aaPredicted RBP17.31■□□□□ 0.36
HERPUD1-214ENST00000568651 MAPK8IP2Q13387 824 aaPredicted RBP17.3■□□□□ 0.36
HERPUD1-214ENST00000568651 FOXD4L1Q9NU39 408 aa17.18■□□□□ 0.34
HERPUD1-214ENST00000568651 DMRT2Q9Y5R5 561 aa17.08■□□□□ 0.32
HERPUD1-214ENST00000568651 HOXD11P31277 338 aaPredicted RBP17.05■□□□□ 0.32
HERPUD1-214ENST00000568651 SLC4A2P04920 1241 aa16.71■□□□□ 0.27
HERPUD1-214ENST00000568651 ATXN8OSP0DMR3 200 aa16.61■□□□□ 0.25
HERPUD1-214ENST00000568651 MYCNP04198 464 aaPredicted RBP16.59■□□□□ 0.25
HERPUD1-214ENST00000568651 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.16■□□□□ 0.18
HERPUD1-214ENST00000568651 HNRNPUL2Q1KMD3 747 aaKnown RBP16.16■□□□□ 0.18
HERPUD1-214ENST00000568651 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.15■□□□□ 0.184e-6■□□□□ 11.1
HERPUD1-214ENST00000568651 DCAF8L1A6NGE4 600 aa16.14■□□□□ 0.17
HERPUD1-214ENST00000568651 SAMD1Q6SPF0 538 aaPredicted RBP16.11■□□□□ 0.17
HERPUD1-214ENST00000568651 FKBP8Q14318 412 aa16.05■□□□□ 0.16
HERPUD1-214ENST00000568651 AMER1Q5JTC6 1135 aaPredicted RBP16.04■□□□□ 0.16
HERPUD1-214ENST00000568651 U3KPZ7 1027 aaPredicted RBP15.99■□□□□ 0.15
HERPUD1-214ENST00000568651 ATF5Q9Y2D1 282 aaPredicted RBP15.95■□□□□ 0.14
HERPUD1-214ENST00000568651 RTN4Q9NQC3 1192 aaKnown RBP15.9■□□□□ 0.14
HERPUD1-214ENST00000568651 APLP2Q06481 763 aa15.84■□□□□ 0.13
HERPUD1-214ENST00000568651 ZNF219Q9P2Y4 722 aaPredicted RBP15.7■□□□□ 0.1
HERPUD1-214ENST00000568651 SLC24A1O60721 1099 aa15.63■□□□□ 0.09
HERPUD1-214ENST00000568651 FBXO3Q9UK99 471 aa15.42■□□□□ 0.06
HERPUD1-214ENST00000568651 SPDYE4A6NLX3 237 aa15.38■□□□□ 0.05
HERPUD1-214ENST00000568651 FBLN2P98095 1184 aa15.35■□□□□ 0.05
HERPUD1-214ENST00000568651 MKRN4PQ13434 485 aaPredicted RBP15.35■□□□□ 0.05
HERPUD1-214ENST00000568651 PROM2Q8N271 834 aa15.35■□□□□ 0.05
HERPUD1-214ENST00000568651 RNF39Q9H2S5 420 aa15.33■□□□□ 0.04
HERPUD1-214ENST00000568651 TRHP20396 242 aaPredicted RBP15.25■□□□□ 0.03
HERPUD1-214ENST00000568651 SPINK5Q9NQ38 1064 aaPredicted RBP15.25■□□□□ 0.03
HERPUD1-214ENST00000568651 C1QBPQ07021 282 aaKnown RBP15.24■□□□□ 0.03
HERPUD1-214ENST00000568651 POLA2Q14181 598 aa15.22■□□□□ 0.03
HERPUD1-214ENST00000568651 ZBTB12Q9Y330 459 aaPredicted RBP15.19■□□□□ 0.02
HERPUD1-214ENST00000568651 CAPN15O75808 1086 aa15.17■□□□□ 0.02
HERPUD1-214ENST00000568651 VASPP50552 380 aaPredicted RBP15.12■□□□□ 0.01
HERPUD1-214ENST00000568651 IFNLR1Q8IU57 520 aaPredicted RBP14.93□□□□□ -0.02
HERPUD1-214ENST00000568651 ABCB7O75027 752 aa14.9□□□□□ -0.02
HERPUD1-214ENST00000568651 POTEDQ86YR6 584 aa14.85□□□□□ -0.03
HERPUD1-214ENST00000568651 DSG3P32926 999 aa14.81□□□□□ -0.04
HERPUD1-214ENST00000568651 SPDYE2BA6NHP3 402 aa14.79□□□□□ -0.04
HERPUD1-214ENST00000568651 SPDYE6P0CI01 402 aa14.79□□□□□ -0.04
HERPUD1-214ENST00000568651 SPDYE2Q495Y8 402 aa14.79□□□□□ -0.04
HERPUD1-214ENST00000568651 STAG3Q9UJ98 1225 aa14.78□□□□□ -0.04
HERPUD1-214ENST00000568651 PLCB2Q00722 1185 aa14.75□□□□□ -0.05
HERPUD1-214ENST00000568651 ZNF692Q9BU19 519 aaPredicted RBP14.75□□□□□ -0.05
HERPUD1-214ENST00000568651 SSUH2Q9Y2M2 353 aa14.75□□□□□ -0.05
HERPUD1-214ENST00000568651 PKD2Q13563 968 aa14.73□□□□□ -0.05
HERPUD1-214ENST00000568651 SPOCK2Q92563 424 aa14.68□□□□□ -0.06
HERPUD1-214ENST00000568651 OSCARQ8IYS5 282 aa14.67□□□□□ -0.06
HERPUD1-214ENST00000568651 NISCHQ9Y2I1 1504 aa14.66□□□□□ -0.06
HERPUD1-214ENST00000568651 KLHL34Q8N239 644 aa14.62□□□□□ -0.07
HERPUD1-214ENST00000568651 DCAF8L2P0C7V8 631 aa14.58□□□□□ -0.08
HERPUD1-214ENST00000568651 PABPN1Q86U42 306 aaKnown RBP eCLIP14.57□□□□□ -0.08
HERPUD1-214ENST00000568651 PLCD3Q8N3E9 789 aa14.55□□□□□ -0.08
HERPUD1-214ENST00000568651 ECM2O94769 699 aaPredicted RBP14.48□□□□□ -0.09
HERPUD1-214ENST00000568651 MIER1Q8N108 512 aa14.47□□□□□ -0.09
HERPUD1-214ENST00000568651 ZBTB47Q9UFB7 747 aaPredicted RBP14.47□□□□□ -0.09
HERPUD1-214ENST00000568651 PLEKHG5O94827 1062 aa14.44□□□□□ -0.1
HERPUD1-214ENST00000568651 HAP1P54257 671 aaPredicted RBP14.44□□□□□ -0.1
HERPUD1-214ENST00000568651 BBXQ8WY36 941 aaPredicted RBP14.43□□□□□ -0.1
HERPUD1-214ENST00000568651 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.4□□□□□ -0.1
HERPUD1-214ENST00000568651 VSIG10Q8N0Z9 540 aa14.38□□□□□ -0.11
HERPUD1-214ENST00000568651 TRIM41Q8WV44 630 aa14.33□□□□□ -0.12
HERPUD1-214ENST00000568651 CACNB1Q02641 598 aaPredicted RBP14.31□□□□□ -0.12
HERPUD1-214ENST00000568651 RGL2O15211 777 aa14.3□□□□□ -0.12
HERPUD1-214ENST00000568651 NPM1P06748 294 aaKnown RBP eCLIP14.27□□□□□ -0.13
HERPUD1-214ENST00000568651 BCANQ96GW7 911 aa14.24□□□□□ -0.13
HERPUD1-214ENST00000568651 CIZ1Q9ULV3 898 aaPredicted RBP14.23□□□□□ -0.13
HERPUD1-214ENST00000568651 PAXIP1Q6ZW49 1069 aaPredicted RBP14.19□□□□□ -0.14
HERPUD1-214ENST00000568651 RBM42Q9BTD8 480 aaKnown RBP14.18□□□□□ -0.14
HERPUD1-214ENST00000568651 GSE1Q14687 1217 aa14.17□□□□□ -0.14
HERPUD1-214ENST00000568651 SPRYD3Q8NCJ5 442 aa14.16□□□□□ -0.14
HERPUD1-214ENST00000568651 SPDYE1Q8NFV5 336 aaPredicted RBP14.15□□□□□ -0.14
HERPUD1-214ENST00000568651 AKT1S1Q96B36 256 aa14.13□□□□□ -0.15
HERPUD1-214ENST00000568651 CFAP44Q96MT7 982 aa14.13□□□□□ -0.15
HERPUD1-214ENST00000568651 CHGAP10645 457 aaKnown RBP14.1□□□□□ -0.15
HERPUD1-214ENST00000568651 HS6ST3Q8IZP7 471 aa14.09□□□□□ -0.15
HERPUD1-214ENST00000568651 DNAJC5Q9H3Z4 198 aa14.09□□□□□ -0.15
HERPUD1-214ENST00000568651 NUBP1P53384 320 aa14.08□□□□□ -0.16
HERPUD1-214ENST00000568651 KDM2AQ9Y2K7 1162 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms