RNA–Protein interactions for RNA: ENST00000568620.5

ATP6V0D1-217, Transcript of ATPase H+ transporting V0 subunit d1, humanhuman

TSL 2

Gene ATP6V0D1, Length 3,390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0D1-217ENST00000568620 NISCHQ9Y2I1 1504 aa23.54■■□□□ 1.36
ATP6V0D1-217ENST00000568620 SHROOM4Q9ULL8 1493 aa20.75■□□□□ 0.91
ATP6V0D1-217ENST00000568620 DCAF8L2P0C7V8 631 aa20.59■□□□□ 0.89
ATP6V0D1-217ENST00000568620 SUPT5HO00267 1087 aaKnown RBP20.46■□□□□ 0.87
ATP6V0D1-217ENST00000568620 ZCCHC6Q5VYS8 1495 aaKnown RBP19.81■□□□□ 0.76
ATP6V0D1-217ENST00000568620 CCDC180Q9P1Z9 1646 aa19.75■□□□□ 0.75
ATP6V0D1-217ENST00000568620 PELP1Q8IZL8 1130 aaKnown RBP19.6■□□□□ 0.73
ATP6V0D1-217ENST00000568620 CHIC1Q5VXU3 224 aa19.49■□□□□ 0.71
ATP6V0D1-217ENST00000568620 PCGF6Q9BYE7 350 aa19.19■□□□□ 0.66
ATP6V0D1-217ENST00000568620 MYO15BQ96JP2 1530 aa19.15■□□□□ 0.66
ATP6V0D1-217ENST00000568620 LOC105371045A0A1W2PR82 267 aa19.12■□□□□ 0.65
ATP6V0D1-217ENST00000568620 MYT1Q01538 1121 aa19.09■□□□□ 0.65
ATP6V0D1-217ENST00000568620 EHMT2Q96KQ7 1210 aa19.07■□□□□ 0.64
ATP6V0D1-217ENST00000568620 DCAF1Q9Y4B6 1507 aa19.04■□□□□ 0.64
ATP6V0D1-217ENST00000568620 FAM9AQ8IZU1 332 aaPredicted RBP19.02■□□□□ 0.64
ATP6V0D1-217ENST00000568620 ABCC9O60706 1549 aa18.98■□□□□ 0.63
ATP6V0D1-217ENST00000568620 PPARGC1BQ86YN6 1023 aaKnown RBP18.96■□□□□ 0.63
ATP6V0D1-217ENST00000568620 HRCP23327 699 aa18.95■□□□□ 0.62
ATP6V0D1-217ENST00000568620 SCRIBQ14160 1630 aa18.95■□□□□ 0.62
ATP6V0D1-217ENST00000568620 TRIM41Q8WV44 630 aa18.95■□□□□ 0.62
ATP6V0D1-217ENST00000568620 RSF1Q96T23 1441 aaPredicted RBP18.72■□□□□ 0.59
ATP6V0D1-217ENST00000568620 TRIM26Q12899 539 aaPredicted RBP18.63■□□□□ 0.57
ATP6V0D1-217ENST00000568620 CECR2Q9BXF3 1484 aa18.51■□□□□ 0.55
ATP6V0D1-217ENST00000568620 RB1CC1Q8TDY2 1594 aa18.47■□□□□ 0.55
ATP6V0D1-217ENST00000568620 NACADO15069 1562 aa18.47■□□□□ 0.55
ATP6V0D1-217ENST00000568620 SCAF1Q9H7N4 1312 aaKnown RBP18.43■□□□□ 0.54
ATP6V0D1-217ENST00000568620 TTBK1Q5TCY1 1321 aaPredicted RBP18.41■□□□□ 0.54
ATP6V0D1-217ENST00000568620 MROH2BQ7Z745 1585 aa18.36■□□□□ 0.53
ATP6V0D1-217ENST00000568620 PABPN1Q86U42 306 aaKnown RBP eCLIP18.36■□□□□ 0.53
ATP6V0D1-217ENST00000568620 ZEB1P37275 1124 aaPredicted RBP18.25■□□□□ 0.51
ATP6V0D1-217ENST00000568620 WIZO95785 1651 aa18.24■□□□□ 0.51
ATP6V0D1-217ENST00000568620 UBTFP17480 764 aaKnown RBP18.2■□□□□ 0.5
ATP6V0D1-217ENST00000568620 CCER1Q8TC90 406 aaPredicted RBP18.13■□□□□ 0.49
ATP6V0D1-217ENST00000568620 BAZ1AQ9NRL2 1556 aaPredicted RBP18.12■□□□□ 0.49
ATP6V0D1-217ENST00000568620 RANGAP1P46060 587 aaPredicted RBP18.09■□□□□ 0.49
ATP6V0D1-217ENST00000568620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.07■□□□□ 0.48
ATP6V0D1-217ENST00000568620 ABCC8Q09428 1581 aa17.97■□□□□ 0.47
ATP6V0D1-217ENST00000568620 CCDC88BA6NC98 1476 aa17.96■□□□□ 0.47
ATP6V0D1-217ENST00000568620 CSRNP3Q8WYN3 585 aa17.95■□□□□ 0.46
ATP6V0D1-217ENST00000568620 APLP2Q06481 763 aa17.91■□□□□ 0.46
ATP6V0D1-217ENST00000568620 TOP2AP11388 1531 aaKnown RBP17.89■□□□□ 0.45
ATP6V0D1-217ENST00000568620 SMARCA4P51532 1647 aa17.89■□□□□ 0.45
ATP6V0D1-217ENST00000568620 SOGA1O94964 1423 aa17.86■□□□□ 0.45
ATP6V0D1-217ENST00000568620 BCL11AQ9H165 835 aa17.82■□□□□ 0.44
ATP6V0D1-217ENST00000568620 CEP162Q5TB80 1403 aa17.79■□□□□ 0.44
ATP6V0D1-217ENST00000568620 HNRNPUL2Q1KMD3 747 aaKnown RBP17.78■□□□□ 0.44
ATP6V0D1-217ENST00000568620 SMARCA2P51531 1590 aa17.77■□□□□ 0.44
ATP6V0D1-217ENST00000568620 PRKCSHP14314 528 aaPredicted RBP17.74■□□□□ 0.43
ATP6V0D1-217ENST00000568620 WRNQ14191 1432 aaPredicted RBP eCLIP17.74■□□□□ 0.43
ATP6V0D1-217ENST00000568620 ACIN1Q9UKV3 1341 aaKnown RBP17.73■□□□□ 0.43
ATP6V0D1-217ENST00000568620 GTF3C3Q9Y5Q9 886 aa17.73■□□□□ 0.43
ATP6V0D1-217ENST00000568620 RUSC2Q8N2Y8 1516 aa17.72■□□□□ 0.43
ATP6V0D1-217ENST00000568620 YTHDC1Q96MU7 727 aaKnown RBP17.7■□□□□ 0.42
ATP6V0D1-217ENST00000568620 TNIKQ9UKE5 1360 aa17.69■□□□□ 0.42
ATP6V0D1-217ENST00000568620 UNC13AQ9UPW8 1703 aa17.67■□□□□ 0.42
ATP6V0D1-217ENST00000568620 EEA1Q15075 1411 aa17.66■□□□□ 0.42
ATP6V0D1-217ENST00000568620 NEUROD1Q13562 356 aa17.66■□□□□ 0.42
ATP6V0D1-217ENST00000568620 BAZ1BQ9UIG0 1483 aaKnown RBP17.66■□□□□ 0.42
ATP6V0D1-217ENST00000568620 CENPBP07199 599 aaPredicted RBP17.65■□□□□ 0.42
ATP6V0D1-217ENST00000568620 GOLGA3Q08378 1498 aa17.63■□□□□ 0.41
ATP6V0D1-217ENST00000568620 DIEXFQ68CQ4 756 aaKnown RBP17.6■□□□□ 0.41
ATP6V0D1-217ENST00000568620 EIF4G1Q04637 1599 aaKnown RBP17.58■□□□□ 0.41
ATP6V0D1-217ENST00000568620 BICRAQ9NZM4 1560 aa17.56■□□□□ 0.4
ATP6V0D1-217ENST00000568620 ATAD2BQ9ULI0 1458 aa17.55■□□□□ 0.4
ATP6V0D1-217ENST00000568620 CLIP1P30622 1438 aa17.55■□□□□ 0.4
ATP6V0D1-217ENST00000568620 CEP164Q9UPV0 1460 aa17.51■□□□□ 0.39
ATP6V0D1-217ENST00000568620 ITGAEP38570 1179 aa17.46■□□□□ 0.39
ATP6V0D1-217ENST00000568620 ATP1B4Q9UN42 357 aaPredicted RBP17.46■□□□□ 0.39
ATP6V0D1-217ENST00000568620 SYNJ1O43426 1573 aa17.41■□□□□ 0.38
ATP6V0D1-217ENST00000568620 ZNF316A6NFI3 1004 aaPredicted RBP17.4■□□□□ 0.38
ATP6V0D1-217ENST00000568620 RAPGEF2Q9Y4G8 1499 aa17.38■□□□□ 0.37
ATP6V0D1-217ENST00000568620 ERICH6Q7L0X2 663 aa17.35■□□□□ 0.37
ATP6V0D1-217ENST00000568620 VPS8Q8N3P4 1428 aa17.33■□□□□ 0.36
ATP6V0D1-217ENST00000568620 PEG3Q9GZU2 1588 aa17.3■□□□□ 0.36
ATP6V0D1-217ENST00000568620 P3H3Q8IVL6 736 aa17.26■□□□□ 0.35
ATP6V0D1-217ENST00000568620 KIF27Q86VH2 1401 aa17.24■□□□□ 0.35
ATP6V0D1-217ENST00000568620 KIF21BO75037 1637 aa17.22■□□□□ 0.35
ATP6V0D1-217ENST00000568620 KANK4Q5T7N3 995 aaPredicted RBP17.21■□□□□ 0.35
ATP6V0D1-217ENST00000568620 ANP32EQ9BTT0 268 aa17.21■□□□□ 0.35
ATP6V0D1-217ENST00000568620 FAM50AQ14320 339 aaKnown RBP17.17■□□□□ 0.34
ATP6V0D1-217ENST00000568620 MIER1Q8N108 512 aa17.15■□□□□ 0.34
ATP6V0D1-217ENST00000568620 NCAPD3P42695 1498 aa17.14■□□□□ 0.33
ATP6V0D1-217ENST00000568620 TOP2BQ02880 1626 aa17.14■□□□□ 0.33
ATP6V0D1-217ENST00000568620 CUX2O14529 1486 aa17.11■□□□□ 0.33
ATP6V0D1-217ENST00000568620 CUX1P39880 1505 aa17.07■□□□□ 0.32
ATP6V0D1-217ENST00000568620 PRXQ9BXM0 1461 aa17.04■□□□□ 0.32
ATP6V0D1-217ENST00000568620 CARMIL1Q5VZK9 1371 aa17.03■□□□□ 0.32
ATP6V0D1-217ENST00000568620 HMGXB3Q12766 1538 aa17.02■□□□□ 0.32
ATP6V0D1-217ENST00000568620 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.31
ATP6V0D1-217ENST00000568620 CFTRP13569 1480 aa17.01■□□□□ 0.31
ATP6V0D1-217ENST00000568620 ARAP1Q96P48 1450 aa17.01■□□□□ 0.31
ATP6V0D1-217ENST00000568620 CCNB3Q8WWL7 1395 aa16.99■□□□□ 0.31
ATP6V0D1-217ENST00000568620 ERICH3Q5RHP9 1530 aa16.98■□□□□ 0.31
ATP6V0D1-217ENST00000568620 BIVM-ERCC5R4GMW8 1640 aa16.96■□□□□ 0.31
ATP6V0D1-217ENST00000568620 IGF1RP08069 1367 aa16.95■□□□□ 0.3
ATP6V0D1-217ENST00000568620 DHX57Q6P158 1386 aaKnown RBP16.94■□□□□ 0.3
ATP6V0D1-217ENST00000568620 FGD5Q6ZNL6 1462 aa16.91■□□□□ 0.3
ATP6V0D1-217ENST00000568620 ARHGAP35Q9NRY4 1499 aa16.91■□□□□ 0.3
ATP6V0D1-217ENST00000568620 CLSPNQ9HAW4 1339 aa16.9■□□□□ 0.3
ATP6V0D1-217ENST00000568620 BCANQ96GW7 911 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms