RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 NISCHQ9Y2I1 1504 aa47.03■■■■■ 5.12
SPSB3-206ENST00000564709 CCDC180Q9P1Z9 1646 aa40.14■■■■■ 4.02
SPSB3-206ENST00000564709 SHROOM4Q9ULL8 1493 aa39.99■■■■□ 3.99
SPSB3-206ENST00000564709 ZCCHC6Q5VYS8 1495 aaKnown RBP39.76■■■■□ 3.96
SPSB3-206ENST00000564709 SUPT5HO00267 1087 aaKnown RBP39.07■■■■□ 3.85
SPSB3-206ENST00000564709 DCAF8L2P0C7V8 631 aa39.02■■■■□ 3.84
SPSB3-206ENST00000564709 DCAF1Q9Y4B6 1507 aa38.55■■■■□ 3.76
SPSB3-206ENST00000564709 CHIC1Q5VXU3 224 aa37.86■■■■□ 3.65
SPSB3-206ENST00000564709 MYO15BQ96JP2 1530 aa37.78■■■■□ 3.64
SPSB3-206ENST00000564709 SCRIBQ14160 1630 aa37.62■■■■□ 3.61
SPSB3-206ENST00000564709 ABCC9O60706 1549 aa37.53■■■■□ 3.6
SPSB3-206ENST00000564709 RSF1Q96T23 1441 aaPredicted RBP37.12■■■■□ 3.53
SPSB3-206ENST00000564709 NACADO15069 1562 aa37.1■■■■□ 3.53
SPSB3-206ENST00000564709 RB1CC1Q8TDY2 1594 aa36.81■■■■□ 3.48
SPSB3-206ENST00000564709 LOC105371045A0A1W2PR82 267 aa36.76■■■■□ 3.47
SPSB3-206ENST00000564709 CECR2Q9BXF3 1484 aa36.71■■■■□ 3.47
SPSB3-206ENST00000564709 MROH2BQ7Z745 1585 aa36.58■■■■□ 3.45
SPSB3-206ENST00000564709 PCGF6Q9BYE7 350 aa36.51■■■■□ 3.44
SPSB3-206ENST00000564709 WIZO95785 1651 aa36.43■■■■□ 3.42
SPSB3-206ENST00000564709 TRIM41Q8WV44 630 aa36.38■■■■□ 3.41
SPSB3-206ENST00000564709 HRCP23327 699 aa36.35■■■■□ 3.41
SPSB3-206ENST00000564709 BAZ1AQ9NRL2 1556 aaPredicted RBP36.16■■■■□ 3.38
SPSB3-206ENST00000564709 UNC13AQ9UPW8 1703 aa36.14■■■■□ 3.38
SPSB3-206ENST00000564709 FAM9AQ8IZU1 332 aaPredicted RBP36.13■■■■□ 3.37
SPSB3-206ENST00000564709 SMARCA4P51532 1647 aa35.91■■■■□ 3.34
SPSB3-206ENST00000564709 EHMT2Q96KQ7 1210 aa35.87■■■■□ 3.33
SPSB3-206ENST00000564709 EIF4G1Q04637 1599 aaKnown RBP35.85■■■■□ 3.33
SPSB3-206ENST00000564709 TRIM26Q12899 539 aaPredicted RBP35.83■■■■□ 3.33
SPSB3-206ENST00000564709 TOP2AP11388 1531 aaKnown RBP35.81■■■■□ 3.32
SPSB3-206ENST00000564709 PPARGC1BQ86YN6 1023 aaKnown RBP35.7■■■■□ 3.31
SPSB3-206ENST00000564709 CCDC88BA6NC98 1476 aa35.63■■■■□ 3.29
SPSB3-206ENST00000564709 PABPN1Q86U42 306 aaKnown RBP eCLIP35.62■■■■□ 3.29
SPSB3-206ENST00000564709 SMARCA2P51531 1590 aa35.62■■■■□ 3.29
SPSB3-206ENST00000564709 BICRAQ9NZM4 1560 aa35.6■■■■□ 3.29
SPSB3-206ENST00000564709 ABCC8Q09428 1581 aa35.54■■■■□ 3.28
SPSB3-206ENST00000564709 PEG3Q9GZU2 1588 aa35.18■■■■□ 3.22
SPSB3-206ENST00000564709 SOGA1O94964 1423 aa35.11■■■■□ 3.21
SPSB3-206ENST00000564709 ATAD2BQ9ULI0 1458 aa34.97■■■■□ 3.19
SPSB3-206ENST00000564709 RUSC2Q8N2Y8 1516 aa34.96■■■■□ 3.19
SPSB3-206ENST00000564709 ZEB1P37275 1124 aaPredicted RBP34.9■■■■□ 3.18
SPSB3-206ENST00000564709 BAZ1BQ9UIG0 1483 aaKnown RBP34.9■■■■□ 3.18
SPSB3-206ENST00000564709 WRNQ14191 1432 aaPredicted RBP eCLIP34.89■■■■□ 3.18
SPSB3-206ENST00000564709 CEP162Q5TB80 1403 aa34.85■■■■□ 3.17
SPSB3-206ENST00000564709 EEA1Q15075 1411 aa34.83■■■■□ 3.17
SPSB3-206ENST00000564709 CSRNP3Q8WYN3 585 aa34.82■■■■□ 3.16
SPSB3-206ENST00000564709 SYNJ1O43426 1573 aa34.8■■■■□ 3.16
SPSB3-206ENST00000564709 TNIKQ9UKE5 1360 aa34.76■■■■□ 3.15
SPSB3-206ENST00000564709 UBTFP17480 764 aaKnown RBP34.7■■■■□ 3.14
SPSB3-206ENST00000564709 TTBK1Q5TCY1 1321 aaPredicted RBP34.67■■■■□ 3.14
SPSB3-206ENST00000564709 GOLGA3Q08378 1498 aa34.65■■■■□ 3.14
SPSB3-206ENST00000564709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.5■■■■□ 3.11
SPSB3-206ENST00000564709 CEP164Q9UPV0 1460 aa34.46■■■■□ 3.11
SPSB3-206ENST00000564709 KIF21BO75037 1637 aa34.46■■■■□ 3.11
SPSB3-206ENST00000564709 CCER1Q8TC90 406 aaPredicted RBP34.37■■■■□ 3.09
SPSB3-206ENST00000564709 TOP2BQ02880 1626 aa34.36■■■■□ 3.09
SPSB3-206ENST00000564709 HMGXB3Q12766 1538 aa34.33■■■■□ 3.09
SPSB3-206ENST00000564709 NCAPD3P42695 1498 aa34.29■■■■□ 3.08
SPSB3-206ENST00000564709 RAPGEF2Q9Y4G8 1499 aa34.27■■■■□ 3.08
SPSB3-206ENST00000564709 BIVM-ERCC5R4GMW8 1640 aa34.26■■■■□ 3.08
SPSB3-206ENST00000564709 CLIP1P30622 1438 aa34.23■■■■□ 3.07
SPSB3-206ENST00000564709 RANGAP1P46060 587 aaPredicted RBP34.12■■■■□ 3.05
SPSB3-206ENST00000564709 CUX1P39880 1505 aa34.07■■■■□ 3.05
SPSB3-206ENST00000564709 VPS8Q8N3P4 1428 aa34.06■■■■□ 3.04
SPSB3-206ENST00000564709 CFTRP13569 1480 aa33.99■■■■□ 3.03
SPSB3-206ENST00000564709 PRXQ9BXM0 1461 aa33.92■■■■□ 3.02
SPSB3-206ENST00000564709 ERICH3Q5RHP9 1530 aa33.91■■■■□ 3.02
SPSB3-206ENST00000564709 APLP2Q06481 763 aa33.85■■■■□ 3.01
SPSB3-206ENST00000564709 PRDM2Q13029 1718 aa33.84■■■■□ 3.01
SPSB3-206ENST00000564709 HNRNPUL2Q1KMD3 747 aaKnown RBP33.84■■■■□ 3.01
SPSB3-206ENST00000564709 KIF27Q86VH2 1401 aa33.81■■■■□ 3
SPSB3-206ENST00000564709 ARAP1Q96P48 1450 aa33.75■■■□□ 2.99
SPSB3-206ENST00000564709 CC2D2AQ9P2K1 1620 aa33.63■■■□□ 2.97
SPSB3-206ENST00000564709 CADPSQ9ULU8 1353 aa33.63■■■□□ 2.97
SPSB3-206ENST00000564709 CUX2O14529 1486 aa33.57■■■□□ 2.96
SPSB3-206ENST00000564709 DIEXFQ68CQ4 756 aaKnown RBP33.56■■■□□ 2.96
SPSB3-206ENST00000564709 KANK4Q5T7N3 995 aaPredicted RBP33.5■■■□□ 2.95
SPSB3-206ENST00000564709 FGD5Q6ZNL6 1462 aa33.49■■■□□ 2.95
SPSB3-206ENST00000564709 ARHGAP35Q9NRY4 1499 aa33.47■■■□□ 2.95
SPSB3-206ENST00000564709 IGF1RP08069 1367 aa33.44■■■□□ 2.94
SPSB3-206ENST00000564709 SCAF1Q9H7N4 1312 aaKnown RBP33.38■■■□□ 2.93
SPSB3-206ENST00000564709 ZNF316A6NFI3 1004 aaPredicted RBP33.36■■■□□ 2.93
SPSB3-206ENST00000564709 FANCD2Q9BXW9 1451 aa33.36■■■□□ 2.93
SPSB3-206ENST00000564709 CARMIL1Q5VZK9 1371 aa33.31■■■□□ 2.92
SPSB3-206ENST00000564709 NESP48681 1621 aa33.23■■■□□ 2.91
SPSB3-206ENST00000564709 RRBP1Q9P2E9 1410 aaKnown RBP33.22■■■□□ 2.91
SPSB3-206ENST00000564709 DNMBPQ6XZF7 1577 aa33.19■■■□□ 2.9
SPSB3-206ENST00000564709 RAD54L2Q9Y4B4 1467 aa33.18■■■□□ 2.9
SPSB3-206ENST00000564709 DHX57Q6P158 1386 aaKnown RBP33.13■■■□□ 2.89
SPSB3-206ENST00000564709 TOPBP1Q92547 1522 aa33.13■■■□□ 2.89
SPSB3-206ENST00000564709 NEUROD1Q13562 356 aa33.13■■■□□ 2.89
SPSB3-206ENST00000564709 ACIN1Q9UKV3 1341 aaKnown RBP33.12■■■□□ 2.89
SPSB3-206ENST00000564709 POLA1P09884 1462 aaPredicted RBP33.11■■■□□ 2.89
SPSB3-206ENST00000564709 TIAM1Q13009 1591 aa33.1■■■□□ 2.89
SPSB3-206ENST00000564709 CCNB3Q8WWL7 1395 aa33.1■■■□□ 2.89
SPSB3-206ENST00000564709 ABCA10Q8WWZ4 1543 aa33.06■■■□□ 2.88
SPSB3-206ENST00000564709 ITGAEP38570 1179 aa33.04■■■□□ 2.88
SPSB3-206ENST00000564709 P3H3Q8IVL6 736 aa33.02■■■□□ 2.88
SPSB3-206ENST00000564709 PCF11O94913 1555 aaKnown RBP32.97■■■□□ 2.87
SPSB3-206ENST00000564709 CLSPNQ9HAW4 1339 aa32.97■■■□□ 2.87
SPSB3-206ENST00000564709 MAP3K1Q13233 1512 aa32.97■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms